HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:16.2 nTPM
HPA Brain:79.4 nTPM
GTEx:16.2 nTPM
FANTOM5:88.1 Scaled Tags Per Million
Pig:29.5 nTPM
Mouse:12.1 nTPM
Allen mouse:7.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006672
Glial cells Not detected
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 79.4
Sample id Sample description nTPM
Hippocampus
nTPM: 73.6
2529 Female, age 94, left hemisphere 83.4
2621 Female, age 67, right hemisphere 82.2
1911 Female, age 85, right hemisphere 71.5
2148 Female, age 91, left hemisphere 70.8
1898 Male, age 80, left hemisphere 70.0
1855 Male, age 76, left hemisphere 63.8
Dentate gyrus
nTPM: 67.5
2530 Female, age 94, left hemisphere 89.0
2531 Female, age 67, both hemispheres 69.8
2010 Male, age 76, both hemispheres 65.9
2246 Female, age 85, both hemispheres 65.1
1927 Female, age 91, both hemispheres 60.2
2528 Male, age 74, both hemispheres 54.7
Entorhinal gyrus
nTPM: 77.5
2686 Male, age 75, right hemisphere 102.8
2613 Female, age 94, left hemisphere 75.6
2764 Male, age 80, right hemisphere 75.1
2117 Female, age 91, right hemisphere 75.0
1938 Female, age 85, left hemisphere 70.9
1787 Male, age 76, left hemisphere 65.7
Hippocampus, CA1
nTPM: 62.8
1873 Female, age 85, both hemispheres 66.6
2527 Male, age 74, both hemispheres 64.8
2082 Female, age 91, right hemisphere 62.0
2045 Male, age 76, both hemispheres 61.6
2749 Male, age 80, left hemisphere 59.0
Hippocampus, CA2
nTPM: 66.4
1963 Male, age 80, left hemisphere 79.7
2437 Female, age 94, left hemisphere 72.2
1892 Male, age 76, both hemispheres 67.0
1940 Female, age 85, left hemisphere 61.0
2113 Female, age 91, right hemisphere 60.6
2249 Male, age 74, both hemispheres 58.2
Hippocampus, CA3
nTPM: 65.2
1891 Female, age 85, both hemispheres 73.6
2861 Female, age 67, both hemispheres 72.5
2620 Female, age 94, left hemisphere 68.2
1867 Male, age 76, both hemispheres 65.4
2436 Male, age 74, both hemispheres 57.7
2137 Male, age 80, left hemisphere 53.7
Parahippocampal cortex
nTPM: 69.5
2532 Female, age 72, left hemisphere 84.7
2692 Male, age 74, both hemispheres 80.5
2622 Female, age 67, right hemisphere 77.5
1850 Male, age 80, both hemispheres 74.6
2018 Male, age 76, both hemispheres 68.9
2245 Female, age 91, both hemispheres 65.4
1990 Female, age 91, right hemisphere 64.0
1933 Female, age 85, both hemispheres 61.2
2693 Female, age 94, both hemispheres 61.0
2250 Female, age 67, right hemisphere 57.3
Perirhinal gyrus
nTPM: 66.8
1794 Male, age 80, right hemisphere 76.8
1841 Female, age 85, right hemisphere 66.2
2848 Male, age 76, right hemisphere 65.4
1847 Female, age 91, left hemisphere 65.0
2521 Female, age 94, right hemisphere 60.7
Subiculum
nTPM: 79.4
2438 Female, age 94, left hemisphere 101.5
2042 Male, age 76, both hemispheres 80.5
1901 Male, age 80, both hemispheres 79.9
2619 Male, age 74, both hemispheres 76.0
1977 Female, age 85, both hemispheres 72.8
2729 Female, age 91, right hemisphere 65.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 16.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.2
Samples: 197

Max nTPM: 37.8
Min nTPM: 6.0
Std nTPM: 5.7
Median nTPM: 14.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 37.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 37.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 34.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 32.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 31.3
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 29.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 29.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 28.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 28.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 27.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 27.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 88.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 88.1
FF:10169-103B7 60 years, female 97.6
FF:10153-102I9 76 years, female 78.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 29.5
Pig sample Sample description nTPM
Subiculum
nTPM: 28.6
Samples: 4

Max nTPM: 35.7
Min nTPM: 24.4
Sample A Female 35.7
Sample B Female 25.8
Sample C Male 28.3
Sample D Male 24.4
Dorsal hippocampus
nTPM: 29.5
Samples: 4

Max nTPM: 33.5
Min nTPM: 21.4
Sample A Female 33.5
Sample B Female 31.0
Sample C Male 32.0
Sample D Male 21.4
Entorhinal cortex
nTPM: 28.0
Samples: 4

Max nTPM: 30.1
Min nTPM: 25.2
Sample A Female 30.1
Sample B Female 27.5
Sample C Male 29.3
Sample D Male 25.2
Ventral hippocampus
nTPM: 28.3
Samples: 4

Max nTPM: 32.7
Min nTPM: 22.9
Sample A Female 29.1
Sample B Female 22.9
Sample C Male 32.7
Sample D Male 28.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 12.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 14.2
Min nTPM: 11.0
Sample A Male 11.0
Sample B Male 11.4
Sample C Female 11.9
Sample D Female 14.2
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 13.2
Min nTPM: 10.0
Sample A Male 10.0
Sample B Male 13.2
Sample C Female 12.7
Sample D Female 11.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
70430772 Antisense, RP_050614_02_A05, Mouse strain C57BL/6J (56 days, male) 7.6

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