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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GARS1 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
66.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
213.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
209.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
151.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
135.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
132.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
132.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
129.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
117.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
116.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
115.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
113.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
102.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
99.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
85.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
84.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
82.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
78.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
74.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
74.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
73.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
70.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
69.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
69.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
69.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
66.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
65.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
61.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
60.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
59.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
58.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
57.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
54.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
53.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
52.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
51.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
51.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
48.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
47.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
47.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
47.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
47.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
44.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
43.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
42.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
41.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
39.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
38.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
38.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
37.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
37.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
36.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
34.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
34.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
33.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
29.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
28.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
28.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
28.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
28.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
24.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
20.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
7.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GARS1 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
187.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
184.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
168.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
136.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
132.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
127.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
122.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
115.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
111.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
110.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
101.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
97.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
95.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
95.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
93.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
92.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
90.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
89.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
89.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
88.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
88.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
86.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
84.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
83.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
82.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
81.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
81.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
80.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
79.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
79.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
77.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
77.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
75.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
75.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
72.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
70.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
70.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
69.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
69.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
69.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
68.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
67.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
66.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
66.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
66.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
65.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
64.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
64.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
63.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
63.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
63.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
63.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
63.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
62.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
62.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
62.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
61.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
61.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
59.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
59.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
59.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
58.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
58.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
57.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
57.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
56.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
56.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
56.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
56.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
56.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
55.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
55.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
54.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
54.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
53.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
53.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
53.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
52.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
52.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
52.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
52.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
52.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
52.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
52.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
52.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
52.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
51.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
51.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
51.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
51.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
50.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
50.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
50.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
49.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
49.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
49.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
49.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
48.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
48.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
48.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
48.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
48.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
47.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
47.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
47.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
47.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
47.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
47.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
46.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
46.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
46.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
46.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
46.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
46.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
46.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
45.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
45.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
45.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
45.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
45.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
45.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
45.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
45.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
45.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
45.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
45.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
44.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
44.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
44.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
44.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
44.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
44.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
44.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
43.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
43.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
43.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
43.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
43.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
43.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
43.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
43.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
43.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
43.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
43.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
43.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
43.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
43.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
43.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
43.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
42.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
42.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
42.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
42.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
42.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
42.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
42.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
42.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
42.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
42.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
42.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
42.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
42.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
42.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
42.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
42.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
42.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
42.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
42.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
42.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
41.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
41.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
41.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
41.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
41.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
41.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
41.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
41.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
41.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
41.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
41.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
41.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
41.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
41.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
40.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
40.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
40.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
40.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
40.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
40.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
40.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
40.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
40.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
40.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
40.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
39.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
39.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
39.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
39.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
39.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
39.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
39.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
39.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
39.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
39.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
39.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
39.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
39.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
39.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
39.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
39.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
39.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
39.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
39.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
39.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
39.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
38.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
38.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
38.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
38.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
38.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
38.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
38.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
38.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
38.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
37.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
37.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
37.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
37.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
37.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
37.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
37.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
37.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
37.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
37.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
37.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
37.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
37.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
37.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
37.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
37.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
37.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
37.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
37.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
37.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
37.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
36.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
36.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
36.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
36.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
36.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
36.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
36.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
36.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
36.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
36.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
35.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
35.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
35.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
35.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
35.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
35.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
35.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
35.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
35.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
35.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
35.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
35.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
35.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
35.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
35.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
35.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
35.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
35.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
34.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
34.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
34.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
34.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
34.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
34.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
34.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
34.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
34.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
34.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
34.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
33.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
33.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
33.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
33.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
33.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
33.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
33.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
33.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
33.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
33.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
33.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
33.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
33.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
33.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
33.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
33.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
33.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
33.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
32.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
32.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
32.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
32.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
32.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
32.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
32.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
32.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
32.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
32.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
32.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
32.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
32.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
32.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
32.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
32.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
32.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
32.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
32.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
32.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
31.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
31.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
31.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
31.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
31.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
31.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
31.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
31.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
31.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
31.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
31.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
31.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
31.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
31.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
30.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
30.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
30.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
30.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
30.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
30.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
30.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
30.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
30.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
30.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
30.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
30.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
30.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
30.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
30.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
30.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
30.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
30.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
30.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
29.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
29.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
29.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
29.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
29.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
29.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
29.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
29.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
29.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
29.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
29.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
29.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
29.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
29.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
29.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
29.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
29.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
29.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
29.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
29.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
29.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
29.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
29.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
28.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
28.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
28.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
28.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
28.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
28.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
28.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
28.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
28.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
28.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
28.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
28.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
28.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
28.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
28.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
28.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
27.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
27.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
27.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
27.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
27.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
27.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
27.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
27.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
27.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
27.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
27.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
27.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
26.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
26.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
26.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
26.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
26.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
26.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
26.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
26.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
26.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
26.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
26.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
26.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
26.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
26.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
25.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
25.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
25.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
25.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
25.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
25.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
25.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
25.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
25.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
24.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
24.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
24.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
24.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
24.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
24.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
24.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
24.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
24.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
24.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
23.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
23.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
23.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
23.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
23.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
23.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
23.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
23.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
23.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
23.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
22.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
22.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
22.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
22.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
22.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
22.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
22.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
21.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
21.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
21.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
21.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
21.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
21.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
21.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
20.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
20.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
20.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
20.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
20.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
20.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
20.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
20.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
20.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
20.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
20.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
19.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
19.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
19.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
19.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
19.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
19.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
19.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
18.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
18.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
18.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
18.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
18.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
18.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
18.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
18.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
17.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
17.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
17.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
16.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
16.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
16.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
15.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
15.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
15.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
15.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
14.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
14.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
14.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
14.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
13.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
13.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
13.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
11.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
11.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
10.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GARS1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
227.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
140.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
130.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
108.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
105.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
90.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
81.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
79.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
76.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
75.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
72.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
70.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
66.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
64.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
61.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
59.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
56.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
56.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
55.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
54.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
54.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
54.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
52.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
52.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
51.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
51.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
51.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
51.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
49.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
49.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
48.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
48.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
48.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
46.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
45.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
45.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
44.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
44.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
44.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
43.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
43.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
42.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
42.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
42.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
41.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
41.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
40.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
40.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
40.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
39.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
39.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
38.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
37.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
37.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
37.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
37.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
36.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
36.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
36.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
36.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
35.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
35.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
35.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
35.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
35.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
34.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
34.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
34.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
34.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
34.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
34.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
33.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
33.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
33.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
32.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
32.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
32.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
31.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
31.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
31.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
30.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
30.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
29.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
29.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
28.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
27.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
27.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
27.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
27.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
25.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
25.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
24.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
22.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
22.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
22.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
19.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GARS1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
170.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
153.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
145.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
140.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
131.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
121.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
121.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
120.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
117.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
117.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
112.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
107.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
103.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
102.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
102.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
99.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
98.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
95.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
94.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
91.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
89.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
88.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
88.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
87.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
87.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
85.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
84.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
84.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
83.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
81.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
81.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
79.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
79.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
77.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
77.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
76.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
75.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
75.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
74.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
74.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
73.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
73.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
72.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
71.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
71.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
71.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
70.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
69.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
68.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
68.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
67.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
67.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
67.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
66.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
66.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
66.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
66.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
66.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
66.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
65.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
65.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
65.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
64.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
64.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
63.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
63.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
63.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
62.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
62.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
61.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
61.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
61.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
61.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
61.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
61.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
61.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
61.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
61.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
60.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
60.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
60.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
60.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
59.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
59.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
58.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
58.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
58.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
58.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
58.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
58.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
57.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
57.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
57.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
57.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
57.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
56.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
55.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
55.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
54.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
54.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
54.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
54.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
54.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
54.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
53.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
53.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
53.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
53.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
53.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
52.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
52.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
52.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
52.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
52.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
52.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
52.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
52.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
51.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
51.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
51.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
51.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
51.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
51.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
51.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
51.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
51.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
51.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
50.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
50.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
50.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
50.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
49.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
49.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
49.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
49.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
49.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
49.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
49.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
48.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
48.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
47.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
47.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
47.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
47.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
47.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
47.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
47.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
46.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
46.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
46.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
46.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
45.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
45.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
45.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
45.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
45.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
45.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
45.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
45.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
44.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
44.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
44.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
44.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
44.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
44.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
44.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
44.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
44.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
43.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
43.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
42.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
42.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
42.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
42.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
42.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
42.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
41.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
41.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
41.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
41.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
41.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
41.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
40.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
40.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
40.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
40.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
40.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
39.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
39.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
39.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
39.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
39.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
39.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
39.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
39.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
38.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
38.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
38.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
37.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
37.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
37.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
37.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
37.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
37.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
37.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
37.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
37.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
37.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
36.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
36.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
36.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
36.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
36.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
36.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
35.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
35.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
35.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
35.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
34.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
34.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
34.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
34.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
33.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
33.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
33.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
33.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
33.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
32.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
32.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
32.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
32.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
31.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
31.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
31.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
31.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
30.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
30.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
30.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
30.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
29.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
29.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
28.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
27.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
26.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
25.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
25.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
25.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
22.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
22.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
22.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
22.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
22.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
22.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
22.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
20.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
20.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
19.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
19.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
18.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
17.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
16.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
16.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
15.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
15.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
13.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
12.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
11.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
11.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
10.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
7.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
7.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
