We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAX1BP1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
157.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
146.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
141.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
133.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
127.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
123.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
112.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
110.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
105.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
103.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
102.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
101.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
100.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
99.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
99.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
98.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
97.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
96.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
96.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
92.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
90.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
90.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
88.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
86.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
85.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
84.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
83.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
82.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
82.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
80.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
80.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
79.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
79.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
78.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
78.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
77.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
77.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
76.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
75.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
75.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
75.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
74.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
73.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
72.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
72.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
71.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
71.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
71.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
70.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
70.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
70.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
70.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
70.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
69.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
68.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
68.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
68.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
67.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
67.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
67.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
66.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
66.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
66.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
66.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
65.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
65.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
65.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
65.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
64.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
64.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
64.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
64.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
64.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
64.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
64.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
64.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
64.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
64.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
63.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
63.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
63.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
63.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
62.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
62.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
62.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
62.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
61.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
61.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
61.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
61.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
61.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
60.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
60.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
60.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
60.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
60.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
59.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
59.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
59.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
59.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
59.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
59.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
59.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
59.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
58.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
58.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
57.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
57.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
57.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
56.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
56.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
56.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
56.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
56.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
55.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
55.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
55.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
55.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
55.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
54.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
54.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
54.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
54.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
54.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
54.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
53.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
53.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
53.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
53.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
52.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
52.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
52.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
52.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
52.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
52.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
52.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
50.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
50.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
50.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
50.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
49.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
49.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
49.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
49.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
49.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
48.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
48.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
48.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
48.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
48.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
48.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
48.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
47.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
47.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
47.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
47.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
47.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
47.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
47.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
47.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
47.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
47.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
46.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
46.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
46.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
46.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
46.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
46.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
46.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
46.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
46.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
46.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
46.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
45.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
45.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
45.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
45.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
45.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
44.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
44.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
44.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
44.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
44.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
44.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
44.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
43.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
43.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
43.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
43.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
43.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
43.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
43.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
43.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
43.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
43.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
43.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
42.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
42.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
42.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
42.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
42.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
42.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
42.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
42.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
42.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
42.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
42.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
41.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
41.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
41.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
41.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
41.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
41.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
41.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
41.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
41.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
41.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
40.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
40.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
40.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
40.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
40.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
40.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
40.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
40.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
40.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
40.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
39.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
39.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
39.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
39.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
39.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
39.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
39.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
38.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
38.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
38.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
38.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
38.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
38.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
38.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
38.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
38.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
38.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
38.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
38.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
38.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
37.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
37.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
37.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
37.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
37.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
37.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
37.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
36.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
36.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
36.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
36.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
36.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
36.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
36.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
36.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
36.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
36.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
36.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
36.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
35.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
35.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
35.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
35.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
35.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
34.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
34.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
34.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
34.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
33.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
33.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
33.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
33.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
33.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
32.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
32.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
32.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
32.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
32.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
32.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
32.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
32.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
32.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
32.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
32.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
31.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
31.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
31.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
31.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
31.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
31.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
31.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
30.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
30.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
30.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
30.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
29.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
29.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
29.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
29.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
28.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
28.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
28.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
28.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
28.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
28.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
27.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
27.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
27.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
27.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
27.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
27.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
26.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
26.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
26.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
26.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
26.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
26.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
26.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
26.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
26.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
25.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
25.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
25.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
25.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
25.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
25.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
25.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
24.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
24.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
23.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
22.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
22.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
22.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
22.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
22.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
22.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
21.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
21.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
20.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
18.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
17.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
17.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
17.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
16.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
15.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
13.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
13.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
12.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
10.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
10.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
9.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
8.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
8.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
7.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAX1BP1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.5
Number of samples
231
Samples
Sample
Description
TPM
DO23513
0 years, male, NA, stage:3, alive, 1200 days
157.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
144.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
124.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
104.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
94.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
90.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
88.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
87.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
85.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
85.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
84.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
84.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
81.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
81.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
81.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
78.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
78.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
77.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
77.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
76.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
75.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
75.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
75.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
74.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
72.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
70.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
69.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
68.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
67.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
67.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
66.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
66.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
65.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
65.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
65.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
65.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
64.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
63.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
63.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
62.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
61.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
61.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
61.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
61.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
60.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
60.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
60.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
60.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
60.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
59.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
59.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
58.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
58.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
58.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
58.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
58.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
58.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
58.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
58.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
57.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
57.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
57.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
55.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
55.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
55.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
55.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
54.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
54.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
54.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
53.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
53.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
52.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
52.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
51.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
51.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
51.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
51.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
50.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
50.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
50.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
50.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
50.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
50.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
50.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
49.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
49.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
49.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
49.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
49.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
49.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
48.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
48.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
47.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
47.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
47.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
47.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
47.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
47.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
46.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
46.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
46.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
46.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
46.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
46.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
45.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
45.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
45.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
45.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
45.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
45.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
44.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
44.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
44.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
44.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
44.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
44.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
44.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
43.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
43.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
43.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
43.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
42.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
42.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
42.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
42.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
41.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
41.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
41.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
41.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
41.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
41.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
40.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
40.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
40.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
40.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
39.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
39.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
39.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
39.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
39.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
39.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
39.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
39.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
38.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
38.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
38.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
38.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
38.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
38.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
37.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
37.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
37.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
37.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
37.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
37.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
36.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
36.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
36.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
36.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
35.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
35.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
35.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
35.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
35.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
35.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
35.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
35.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
34.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
34.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
34.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
34.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
34.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
33.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
33.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
33.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
33.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
33.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
33.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
33.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
33.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
32.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
32.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
32.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
32.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
32.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
31.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
31.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
31.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
31.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
31.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
31.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
31.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
31.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
30.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
30.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
29.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
29.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
29.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
29.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
29.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
28.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
28.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
28.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
28.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
28.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
28.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
28.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
27.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
26.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
26.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
25.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
25.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
25.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
25.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
25.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
24.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
24.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
23.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
22.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
21.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
21.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
20.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
20.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
19.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
19.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
19.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
18.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
18.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
17.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
14.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
8.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
1041
Tumor
2.9
351
Tumor
2.8
573
Tumor
2.7
911
Tumor
2.6
533
Tumor
2.6
913
Tumor
2.3
857
Tumor
1.3
493
Tumor
1.3
375
Tumor
1.2
471
Tumor
1.1
491
Tumor
1.1
145
Tumor
1.1
525
Tumor
1.0
445
Tumor
1.0
427
Tumor
1.0
755
Tumor
1.0
211
Tumor
1.0
223
Tumor
0.9
385
Tumor
0.9
685
Tumor
0.9
425
Tumor
0.8
873
Tumor
0.8
1015
Tumor
0.8
343
Tumor
0.8
267
Tumor
0.8
395
Tumor
0.8
1045
Tumor
0.8
741
Tumor
0.8
191
Tumor
0.8
967
Tumor
0.7
977
Tumor
0.6
915
Tumor
0.6
473
Tumor
0.6
1013
Tumor
0.6
483
Tumor
0.5
283
Tumor
0.5
413
Tumor
0.5
451
Tumor
0.4
724
Normal
0.4
527
Tumor
0.4
231
Tumor
0.4
393
Tumor
0.3
477
Tumor
0.3
513
Tumor
0.3
535
Tumor
0.3
647
Tumor
0.3
975
Tumor
0.3
363
Tumor
0.3
487
Tumor
0.3
627
Tumor
0.3
861
Tumor
0.3
925
Tumor
0.3
943
Tumor
0.2
415
Tumor
0.2
187
Tumor
0.2
537
Tumor
0.2
257
Tumor
0.2
697
Tumor
0.2
297
Tumor
0.2
957
Tumor
0.2
665
Tumor
0.2
937
Tumor
0.2
261
Tumor
0.2
663
Tumor
0.2
123
Tumor
0.1
331
Tumor
0.1
171
Tumor
0.1
311
Tumor
0.1
213
Tumor
0.1
137
Tumor
0.1
743
Tumor
0.1
917
Tumor
0.1
553
Tumor
0.1
865
Tumor
0.1
1027
Tumor
0.1
517
Tumor
0.1
271
Tumor
0.0
135
Tumor
0.0
355
Tumor
0.0
785
Tumor
0.0
817
Tumor
0.0
615
Tumor
0.0
1025
Tumor
0.0
125
Tumor
0.0
912
Normal
0.0
1021
Tumor
0.0
443
Tumor
0.0
953
Tumor
0.0
478
Normal
-0.1
1042
Normal
-0.1
481
Tumor
-0.1
545
Tumor
-0.1
617
Tumor
-0.1
963
Tumor
-0.1
127
Tumor
-0.1
383
Tumor
-0.1
721
Tumor
-0.1
867
Tumor
-0.1
863
Tumor
-0.2
563
Tumor
-0.2
268
Normal
-0.2
313
Tumor
-0.2
851
Tumor
-0.2
881
Tumor
-0.2
641
Tumor
-0.2
352
Normal
-0.2
461
Tumor
-0.2
884
Normal
-0.2
534
Normal
-0.2
147
Tumor
-0.2
447
Tumor
-0.2
431
Tumor
-0.2
498
Normal
-0.2
978
Normal
-0.2
488
Normal
-0.2
455
Tumor
-0.2
1031
Tumor
-0.2
965
Tumor
-0.2
536
Normal
-0.2
515
Tumor
-0.3
444
Normal
-0.3
823
Tumor
-0.3
262
Normal
-0.3
353
Tumor
-0.3
983
Tumor
-0.3
272
Normal
-0.3
492
Normal
-0.3
528
Normal
-0.3
232
Normal
-0.3
715
Tumor
-0.3
312
Normal
-0.3
954
Normal
-0.3
314
Normal
-0.3
227
Tumor
-0.3
258
Normal
-0.3
944
Normal
-0.3
146
Normal
-0.3
474
Normal
-0.3
344
Normal
-0.3
951
Tumor
-0.3
955
Tumor
-0.3
574
Normal
-0.3
882
Normal
-0.3
354
Normal
-0.3
142
Normal
-0.4
524
Normal
-0.4
727
Tumor
-0.4
557
Tumor
-0.4
217
Tumor
-0.4
1043
Tumor
-0.4
494
Normal
-0.4
136
Normal
-0.4
815
Tumor
-0.4
482
Normal
-0.4
278
Normal
-0.4
356
Normal
-0.4
713
Tumor
-0.4
868
Normal
-0.4
567
Tumor
-0.4
883
Tumor
-0.4
1026
Normal
-0.4
497
Tumor
-0.4
462
Normal
-0.4
285
Tumor
-0.4
132
Normal
-0.4
484
Normal
-0.4
141
Tumor
-0.4
1032
Normal
-0.4
1028
Normal
-0.4
956
Normal
-0.4
878
Normal
-0.4
984
Normal
-0.4
435
Tumor
-0.4
342
Normal
-0.4
538
Normal
-0.4
365
Tumor
-0.4
722
Normal
-0.4
446
Normal
-0.4
921
Tumor
-0.4
814
Normal
-0.5
332
Normal
-0.5
546
Normal
-0.5
1044
Normal
-0.5
138
Normal
-0.5
433
Tumor
-0.5
737
Tumor
-0.5
422
Normal
-0.5
364
Normal
-0.5
938
Normal
-0.5
463
Tumor
-0.5
472
Normal
-0.5
221
Tumor
-0.5
1016
Normal
-0.5
328
Normal
-0.5
298
Normal
-0.5
571
Tumor
-0.5
777
Tumor
-0.5
671
Tumor
-0.5
526
Normal
-0.5
1022
Normal
-0.5
916
Normal
-0.5
1014
Normal
-0.5
877
Tumor
-0.5
923
Tumor
-0.5
195
Tumor
-0.5
467
Tumor
-0.5
222
Normal
-0.5
564
Normal
-0.5
635
Tumor
-0.5
341
Tumor
-0.5
698
Normal
-0.5
1046
Normal
-0.5
214
Normal
-0.5
357
Tumor
-0.5
968
Normal
-0.5
448
Normal
-0.5
864
Normal
-0.5
384
Normal
-0.5
228
Normal
-0.5
284
Normal
-0.5
813
Tumor
-0.5
185
Tumor
-0.5
852
Normal
-0.5
224
Normal
-0.5
982
Normal
-0.5
686
Normal
-0.5
412
Normal
-0.5
432
Normal
-0.6
514
Normal
-0.6
327
Tumor
-0.6
745
Tumor
-0.6
286
Normal
-0.6
358
Normal
-0.6
456
Normal
-0.6
416
Normal
-0.6
723
Tumor
-0.6
428
Normal
-0.6
976
Normal
-0.6
126
Normal
-0.6
558
Normal
-0.6
756
Normal
-0.6
424
Normal
-0.6
426
Normal
-0.6
161
Tumor
-0.6
554
Normal
-0.6
728
Normal
-0.6
568
Normal
-0.6
468
Normal
-0.6
866
Normal
-0.6
192
Normal
-0.6
361
Tumor
-0.6
958
Normal
-0.6
572
Normal
-0.6
464
Normal
-0.6
411
Tumor
-0.6
964
Normal
-0.6
396
Normal
-0.6
862
Normal
-0.6
778
Normal
-0.6
874
Normal
-0.6
786
Normal
-0.6
516
Normal
-0.6
716
Normal
-0.6
196
Normal
-0.6
738
Normal
-0.6
277
Tumor
-0.6
421
Tumor
-0.6
434
Normal
-0.6
124
Normal
-0.6
218
Normal
-0.6
367
Tumor
-0.6
114
Normal
-0.6
212
Normal
-0.6
112
Tumor
-0.7
111
Normal
-0.7
391
Tumor
-0.7
746
Normal
-0.7
666
Normal
-0.7
922
Normal
-0.7
672
Normal
-0.7
714
Normal
-0.7
188
Normal
-0.7
186
Normal
-0.7
981
Tumor
-0.7
824
Normal
-0.7
452
Normal
-0.7
392
Normal
-0.7
388
Normal
-0.7
696
Normal
-0.7
394
Normal
-0.7
423
Tumor
-0.7
518
Normal
-0.7
465
Tumor
-0.7
858
Normal
-0.7
466
Normal
-0.7
414
Normal
-0.7
128
Normal
-0.7
113
Tumor
-0.7
966
Normal
-0.8
523
Tumor
-0.8
952
Normal
-0.8
436
Normal
-0.8
818
Normal
-0.8
628
Normal
-0.8
918
Normal
-0.8
366
Normal
-0.8
362
Normal
-0.8
664
Normal
-0.8
924
Normal
-0.8
744
Normal
-0.8
386
Normal
-0.8
642
Normal
-0.8
662
Normal
-0.8
648
Normal
-0.8
131
Tumor
-0.8
742
Normal
-0.8
618
Normal
-0.8
368
Normal
-0.9
661
Tumor
-0.9
616
Normal
-0.9
816
Normal
-0.9
926
Normal
-0.9
376
Normal
-0.9
636
Normal
-0.9
148
Normal
-0.9
172
Normal
-0.9
162
Normal
-1.0
695
Tumor
-1.0
387
Tumor
-1.1
914
Normal
-2.9
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
