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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
48.3
nTPM
HPA Brain:
86.1
nTPM
GTEx:
48.3
nTPM
FANTOM5:
91.0
Scaled Tags Per Million
Pig:
119.7
nTPM
Mouse:
77.6
nTPM
Allen mouse:
16.7
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
86.1
Sample id
Sample description
nTPM
Amygdala nTPM: 86.1
2814
Male, age 76, right hemisphere
101.7
2695
Female, age 67, right hemisphere
87.6
2514
Male, age 75, right hemisphere
87.4
2517
Female, age 94, left hemisphere
77.3
1987
Female, age 91, left hemisphere
76.4
Basal amygdala nTPM: 68.2
2609
Male, age 75, right hemisphere
81.6
2110
Male, age 80, left hemisphere
78.9
1955
Male, age 76, both hemispheres
76.7
2243
Female, age 91, right hemisphere
63.3
2685
Female, age 94, left hemisphere
57.2
2827
Female, age 67, right hemisphere
51.6
Central amygdala nTPM: 75.9
1905
Male, age 76, both hemispheres
91.0
2515
Male, age 75, right hemisphere
75.9
2239
Male, age 80, left hemisphere
73.5
2826
Female, age 94, left hemisphere
70.2
2701
Female, age 91, right hemisphere
68.7
Corticomedial amygdala nTPM: 69.4
2428
Male, age 75, right hemisphere
82.0
2240
Male, age 76, both hemispheres
76.5
2829
Male, age 80, left hemisphere
73.6
2429
Female, age 94, left hemisphere
69.7
2242
Female, age 91, right hemisphere
61.0
2535
Female, age 67, right hemisphere
53.8
Lateral amygdala nTPM: 71.2
1883
Male, age 76, both hemispheres
94.8
2516
Male, age 75, right hemisphere
84.7
2534
Female, age 94, left hemisphere
67.4
2255
Female, age 91, right hemisphere
61.9
2830
Female, age 67, right hemisphere
61.7
2256
Male, age 80, left hemisphere
56.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
48.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 48.3
Samples: 152
Max nTPM: 71.7
Min nTPM: 32.0
Std nTPM: 6.5
Median nTPM: 47.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
71.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
67.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
66.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
62.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
60.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
60.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
59.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
59.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
58.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
58.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
58.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
58.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
58.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
57.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
57.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
56.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
56.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
55.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
55.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
55.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
55.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
55.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
55.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
55.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
54.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
54.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
54.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
54.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
54.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
54.3
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
53.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
53.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
53.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
53.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
52.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
52.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
52.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
51.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
51.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
51.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
51.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
51.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
51.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
51.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
51.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
51.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
51.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
51.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
50.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
50.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
50.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
50.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
50.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
50.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
50.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
49.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
49.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
49.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
49.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
49.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
49.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
49.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
49.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
48.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
48.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
48.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
48.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
48.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
48.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
48.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
48.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
48.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
48.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
47.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
47.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
47.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
47.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
47.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
47.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
47.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
47.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
47.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
47.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
47.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
46.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
46.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
46.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
46.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
46.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
46.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
46.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
46.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
46.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
46.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
46.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
45.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
45.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
45.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
45.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
45.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
45.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
45.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
45.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
45.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
45.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
44.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
44.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
44.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
44.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
44.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
44.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
44.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
44.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
44.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
44.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
43.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
43.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
43.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
43.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
43.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
42.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
42.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
42.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
42.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
42.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
42.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
41.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
41.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
41.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
40.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
40.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
40.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
40.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
40.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
40.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
40.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
40.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
40.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
40.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
40.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
39.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
39.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
39.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
39.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
38.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
38.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
38.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
37.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
36.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
36.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
36.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
32.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
77.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 77.6
Samples: 4
Max nTPM: 78.3
Min nTPM: 76.9
Sample A
Male
78.3
Sample B
Male
78.3
Sample C
Female
76.9
Sample D
Female
77.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
