We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSPAN12 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
528.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
257.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
208.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
151.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
140.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
82.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
81.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
75.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
71.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
69.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
65.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
62.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
58.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
58.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
57.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
52.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
47.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
44.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
40.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
36.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
35.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
33.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
28.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
27.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
24.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
23.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
23.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
21.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
18.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
18.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
18.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
17.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
15.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
14.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
14.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
14.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
13.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
11.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
9.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
7.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
6.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
5.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
5.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
4.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
3.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
2.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
2.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
2.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
1.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
1.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
1.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSPAN12 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
95.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
430.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
346.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
315.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
307.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
289.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
285.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
284.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
283.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
265.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
263.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
255.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
245.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
242.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
238.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
235.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
235.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
232.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
231.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
229.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
227.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
225.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
225.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
223.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
221.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
219.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
218.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
213.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
213.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
213.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
211.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
209.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
207.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
206.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
206.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
205.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
201.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
198.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
197.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
197.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
193.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
193.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
189.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
189.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
187.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
187.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
186.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
186.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
184.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
183.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
178.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
177.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
177.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
176.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
174.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
173.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
172.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
172.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
170.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
170.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
167.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
162.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
161.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
160.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
159.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
158.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
158.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
158.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
158.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
158.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
156.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
156.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
156.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
155.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
155.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
154.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
154.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
154.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
153.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
152.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
151.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
151.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
149.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
149.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
149.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
149.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
148.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
148.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
148.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
148.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
147.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
147.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
144.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
144.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
144.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
143.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
143.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
143.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
142.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
142.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
142.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
142.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
141.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
140.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
140.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
139.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
139.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
138.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
138.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
137.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
137.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
137.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
137.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
136.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
136.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
136.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
135.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
134.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
134.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
134.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
133.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
133.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
133.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
132.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
131.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
131.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
130.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
129.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
129.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
129.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
129.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
129.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
129.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
128.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
127.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
127.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
127.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
127.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
127.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
126.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
126.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
126.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
124.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
124.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
124.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
124.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
123.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
122.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
122.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
122.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
122.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
121.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
121.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
121.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
119.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
119.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
119.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
119.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
118.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
118.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
118.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
117.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
117.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
117.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
117.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
117.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
116.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
116.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
116.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
116.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
115.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
115.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
114.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
114.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
113.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
112.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
112.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
112.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
111.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
111.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
111.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
111.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
111.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
111.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
110.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
110.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
110.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
110.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
109.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
109.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
108.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
108.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
108.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
108.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
107.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
106.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
106.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
106.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
105.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
105.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
105.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
104.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
104.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
104.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
104.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
103.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
103.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
102.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
102.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
101.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
101.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
101.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
100.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
100.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
100.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
100.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
100.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
99.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
99.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
99.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
99.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
99.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
98.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
98.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
98.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
97.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
97.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
97.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
97.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
97.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
96.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
96.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
96.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
96.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
95.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
94.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
94.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
94.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
93.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
93.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
93.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
92.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
92.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
92.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
92.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
92.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
92.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
91.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
91.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
91.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
91.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
91.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
91.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
90.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
90.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
90.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
90.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
89.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
89.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
89.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
88.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
88.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
88.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
88.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
88.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
88.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
88.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
87.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
86.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
86.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
86.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
86.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
85.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
85.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
85.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
85.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
85.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
85.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
85.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
84.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
84.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
84.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
84.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
84.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
83.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
83.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
83.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
83.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
83.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
82.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
81.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
81.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
81.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
79.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
79.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
79.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
79.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
79.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
79.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
78.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
77.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
77.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
77.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
76.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
76.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
75.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
75.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
75.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
74.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
74.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
73.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
73.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
73.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
73.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
72.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
72.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
72.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
71.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
71.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
71.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
71.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
70.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
70.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
70.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
70.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
69.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
68.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
68.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
68.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
66.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
66.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
66.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
66.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
65.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
65.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
65.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
65.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
64.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
63.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
63.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
63.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
62.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
62.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
62.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
62.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
61.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
61.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
61.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
61.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
61.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
61.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
60.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
59.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
59.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
59.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
59.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
58.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
58.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
58.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
57.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
57.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
57.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
57.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
56.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
56.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
56.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
56.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
56.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
55.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
54.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
54.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
53.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
53.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
53.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
53.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
53.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
52.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
52.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
52.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
52.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
52.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
52.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
52.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
52.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
51.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
51.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
51.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
51.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
50.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
50.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
50.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
50.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
50.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
49.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
49.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
49.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
49.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
49.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
49.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
49.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
48.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
48.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
48.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
48.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
47.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
47.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
47.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
47.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
47.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
46.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
46.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
45.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
45.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
44.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
44.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
43.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
42.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
42.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
42.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
42.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
42.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
41.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
41.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
41.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
40.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
40.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
40.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
38.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
38.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
38.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
37.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
37.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
37.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
36.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
35.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
35.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
35.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
35.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
35.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
34.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
34.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
33.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
33.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
33.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
32.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
31.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
31.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
31.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
31.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
31.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
30.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
28.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
27.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
27.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
27.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
26.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
26.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
25.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
24.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
24.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
24.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
23.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
22.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
21.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
20.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
20.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
20.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
20.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
20.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
20.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
19.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
18.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
18.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
18.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
17.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
17.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
17.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
17.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
16.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
15.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
14.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
13.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
13.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
13.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
12.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
12.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
11.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
11.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
11.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
11.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
9.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
7.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
6.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
2.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
2.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
2.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
1.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
1.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
1.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
1.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSPAN12 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
119.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
334.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
274.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
268.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
244.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
241.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
240.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
233.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
219.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
212.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
207.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
206.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
201.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
195.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
189.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
187.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
186.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
185.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
175.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
174.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
171.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
167.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
166.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
165.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
161.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
159.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
159.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
158.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
157.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
156.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
151.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
145.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
143.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
142.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
139.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
139.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
135.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
134.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
134.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
134.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
133.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
131.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
129.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
128.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
127.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
123.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
121.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
121.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
119.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
119.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
119.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
112.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
111.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
111.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
106.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
106.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
104.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
103.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
103.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
102.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
99.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
99.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
98.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
97.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
97.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
94.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
92.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
91.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
90.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
89.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
87.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
86.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
84.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
83.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
82.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
79.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
78.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
74.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
72.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
68.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
64.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
62.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
57.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
56.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
54.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
50.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
41.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
40.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
36.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
34.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
25.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
24.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
19.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
12.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
10.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
6.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
5.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSPAN12 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
63.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
651.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
497.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
437.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
425.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
312.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
275.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
208.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
189.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
174.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
167.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
167.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
163.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
160.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
159.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
148.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
147.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
146.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
140.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
140.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
139.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
139.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
138.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
133.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
132.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
131.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
128.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
126.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
125.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
125.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
123.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
121.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
113.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
112.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
110.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
109.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
108.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
107.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
107.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
106.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
106.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
104.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
102.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
102.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
102.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
99.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
98.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
97.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
97.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
97.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
96.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
95.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
95.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
94.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
94.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
90.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
89.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
89.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
89.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
89.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
87.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
87.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
86.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
86.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
85.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
84.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
82.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
81.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
81.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
80.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
80.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
79.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
79.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
77.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
77.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
77.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
77.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
76.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
75.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
75.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
74.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
73.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
73.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
72.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
72.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
71.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
69.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
68.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
68.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
67.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
67.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
66.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
66.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
66.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
66.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
65.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
65.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
61.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
60.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
60.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
59.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
59.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
59.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
58.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
58.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
58.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
58.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
57.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
57.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
55.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
55.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
55.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
54.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
54.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
53.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
53.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
52.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
52.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
52.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
51.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
51.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
51.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
50.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
49.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
48.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
48.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
48.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
47.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
47.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
47.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
47.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
46.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
46.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
46.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
45.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
45.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
45.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
45.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
45.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
44.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
44.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
44.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
44.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
43.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
43.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
43.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
43.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
43.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
43.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
42.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
42.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
42.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
41.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
41.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
41.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
41.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
41.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
40.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
40.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
40.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
40.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
40.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
40.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
40.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
40.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
38.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
38.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
37.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
36.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
36.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
36.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
36.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
36.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
36.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
35.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
35.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
35.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
35.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
35.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
34.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
34.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
33.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
33.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
33.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
33.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
33.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
33.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
33.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
32.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
32.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
32.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
32.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
32.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
31.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
30.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
30.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
30.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
30.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
30.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
30.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
29.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
29.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
29.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
29.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
29.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
29.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
29.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
28.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
28.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
28.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
28.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
28.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
27.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
27.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
27.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
27.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
26.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
26.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
26.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
25.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
25.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
24.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
24.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
24.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
23.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
23.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
23.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
22.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
22.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
22.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
22.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
22.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
21.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
20.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
20.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
20.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
20.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
18.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
18.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
18.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
17.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
17.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
16.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
15.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
14.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
14.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
14.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
14.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
14.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
13.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
13.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
12.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
12.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
12.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
12.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
12.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
11.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
11.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
11.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
11.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
10.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
9.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
8.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
8.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
8.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
7.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
7.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
7.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
2.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
