HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:103.6 nTPM
HPA Brain:104.8 nTPM
GTEx:103.6 nTPM
FANTOM5:93.5 Scaled Tags Per Million
Pig:106.5 nTPM
Mouse:194.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024258Antibody HPA058593Antibody CAB004670
Glial cells LowLowHigh
Neuronal cells MediumMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 104.8
Sample id Sample description nTPM
Hippocampus
nTPM: 92.6
1898 Male, age 80, left hemisphere 104.7
2529 Female, age 94, left hemisphere 99.5
1855 Male, age 76, left hemisphere 97.8
2621 Female, age 67, right hemisphere 97.3
2148 Female, age 91, left hemisphere 78.9
1911 Female, age 85, right hemisphere 77.5
Dentate gyrus
nTPM: 95.7
2010 Male, age 76, both hemispheres 123.0
1927 Female, age 91, both hemispheres 105.3
2530 Female, age 94, left hemisphere 101.8
2246 Female, age 85, both hemispheres 93.1
2531 Female, age 67, both hemispheres 75.8
2528 Male, age 74, both hemispheres 75.3
Entorhinal gyrus
nTPM: 86.8
1938 Female, age 85, left hemisphere 107.8
2764 Male, age 80, right hemisphere 94.4
1787 Male, age 76, left hemisphere 94.1
2117 Female, age 91, right hemisphere 88.2
2686 Male, age 75, right hemisphere 69.1
2613 Female, age 94, left hemisphere 67.0
Hippocampus, CA1
nTPM: 104.8
2045 Male, age 76, both hemispheres 138.2
2749 Male, age 80, left hemisphere 126.4
1873 Female, age 85, both hemispheres 100.0
2527 Male, age 74, both hemispheres 81.8
2082 Female, age 91, right hemisphere 77.4
Hippocampus, CA2
nTPM: 97.1
1892 Male, age 76, both hemispheres 138.5
1963 Male, age 80, left hemisphere 100.9
2249 Male, age 74, both hemispheres 89.0
2437 Female, age 94, left hemisphere 89.0
1940 Female, age 85, left hemisphere 84.9
2113 Female, age 91, right hemisphere 80.5
Hippocampus, CA3
nTPM: 95.8
1867 Male, age 76, both hemispheres 132.1
2137 Male, age 80, left hemisphere 107.5
2436 Male, age 74, both hemispheres 95.1
1891 Female, age 85, both hemispheres 92.3
2620 Female, age 94, left hemisphere 79.5
2861 Female, age 67, both hemispheres 68.5
Parahippocampal cortex
nTPM: 91.1
2018 Male, age 76, both hemispheres 115.8
1850 Male, age 80, both hemispheres 104.9
1933 Female, age 85, both hemispheres 97.7
2250 Female, age 67, right hemisphere 96.2
1990 Female, age 91, right hemisphere 95.8
2245 Female, age 91, both hemispheres 92.5
2532 Female, age 72, left hemisphere 92.5
2693 Female, age 94, both hemispheres 74.0
2622 Female, age 67, right hemisphere 71.6
2692 Male, age 74, both hemispheres 69.6
Perirhinal gyrus
nTPM: 101.8
1841 Female, age 85, right hemisphere 116.5
1847 Female, age 91, left hemisphere 105.8
2848 Male, age 76, right hemisphere 104.0
1794 Male, age 80, right hemisphere 103.6
2521 Female, age 94, right hemisphere 79.3
Subiculum
nTPM: 95.6
2042 Male, age 76, both hemispheres 107.9
2438 Female, age 94, left hemisphere 107.5
1977 Female, age 85, both hemispheres 102.3
1901 Male, age 80, both hemispheres 101.9
2619 Male, age 74, both hemispheres 83.3
2729 Female, age 91, right hemisphere 70.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 103.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 103.6
Samples: 197

Max nTPM: 280.4
Min nTPM: 45.6
Std nTPM: 29.2
Median nTPM: 99.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 280.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 233.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 222.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 195.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 171.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 171.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 157.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 155.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 150.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 147.3
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 145.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 93.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 93.5
FF:10169-103B7 60 years, female 99.7
FF:10153-102I9 76 years, female 87.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 106.5
Pig sample Sample description nTPM
Subiculum
nTPM: 98.8
Samples: 4

Max nTPM: 123.9
Min nTPM: 87.8
Sample A Female 123.9
Sample B Female 94.5
Sample C Male 89.1
Sample D Male 87.8
Dorsal hippocampus
nTPM: 106.6
Samples: 4

Max nTPM: 134.5
Min nTPM: 88.2
Sample A Female 134.5
Sample B Female 104.3
Sample C Male 99.2
Sample D Male 88.2
Entorhinal cortex
nTPM: 103.1
Samples: 4

Max nTPM: 108.4
Min nTPM: 94.9
Sample A Female 105.2
Sample B Female 108.4
Sample C Male 103.9
Sample D Male 94.9
Ventral hippocampus
nTPM: 97.6
Samples: 4

Max nTPM: 107.1
Min nTPM: 75.4
Sample A Female 107.1
Sample B Female 75.4
Sample C Male 106.1
Sample D Male 101.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 194.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 188.0
Samples: 4

Max nTPM: 199.4
Min nTPM: 175.0
Sample A Male 175.0
Sample B Male 199.4
Sample C Female 183.1
Sample D Female 194.6
Hippocampal formation
nTPM: 194.5
Samples: 4

Max nTPM: 207.5
Min nTPM: 181.1
Sample A Male 207.5
Sample B Male 189.8
Sample C Female 199.6
Sample D Female 181.1

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