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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
5.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
4.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
2.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
1.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
1.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
1.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
1.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
1.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
1.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
1.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
1.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TFEC is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
71.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
61.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
53.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
49.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
43.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
42.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
39.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
38.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
38.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
38.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
38.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
36.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
36.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
36.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
32.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
32.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
31.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
31.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
31.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
31.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
30.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
30.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
30.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
29.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
29.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
29.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
29.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
28.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
28.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
28.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
27.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
27.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
27.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
27.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
27.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
27.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
27.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
26.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
26.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
26.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
26.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
26.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
26.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
26.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
25.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
25.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
25.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
25.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
25.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
25.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
25.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
24.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
24.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
24.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
24.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
24.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
24.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
23.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
23.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
23.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
23.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
23.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
23.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
22.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
22.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
22.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
22.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
22.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
22.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
22.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
22.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
22.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
22.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
21.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
21.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
21.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
21.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
21.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
21.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
21.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
21.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
21.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
21.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
21.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
20.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
20.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
20.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
20.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
20.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
20.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
20.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
20.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
20.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
20.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
20.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
19.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
19.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
19.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
19.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
19.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
19.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
19.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
19.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
19.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
19.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
19.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
18.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
18.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
18.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
18.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
18.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
18.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
18.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
18.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
18.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
18.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
18.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
18.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
18.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
17.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
17.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
17.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
17.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
17.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
17.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
17.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
17.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
17.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
17.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
17.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
17.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
17.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
17.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
17.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
16.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
16.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
16.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
16.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
16.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
16.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
16.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
16.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
16.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
16.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
16.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
15.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
15.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
15.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
15.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
15.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
15.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
15.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
15.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
15.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
15.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
15.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
15.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
15.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
15.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
14.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
14.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
14.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
14.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
14.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
14.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
14.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
14.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
14.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
14.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
14.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
14.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
14.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
14.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
14.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
14.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
14.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
14.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
14.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
14.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
13.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
13.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
13.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
13.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
13.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
13.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
13.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
13.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
13.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
13.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
13.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
13.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
13.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
13.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
12.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
12.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
12.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
12.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
12.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
12.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
12.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
12.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
12.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
12.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
12.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
12.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
12.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
12.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
12.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
12.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
11.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
11.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
11.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
11.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
11.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
11.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
11.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
11.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
11.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
11.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
11.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
11.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
11.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
11.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
11.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
11.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
11.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
10.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
10.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
10.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
10.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
10.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
10.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
10.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
10.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
10.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
10.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
10.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
10.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
10.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
10.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
10.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
10.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
9.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
9.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
9.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
9.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
9.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
9.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
9.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
9.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
9.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
9.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
9.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
9.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
9.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
9.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
9.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
8.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
8.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
8.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
8.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
8.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
8.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
8.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
8.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
8.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
8.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
8.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
8.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
7.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
7.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
7.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
7.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
7.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
7.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
7.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
7.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
7.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
7.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
7.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
7.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
6.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
6.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
6.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
6.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
6.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
6.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
6.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
6.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
6.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
6.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
6.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
6.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
6.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
6.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
6.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
6.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
6.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
6.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
6.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
6.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
5.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
5.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
5.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
5.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
5.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
5.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
5.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
5.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
5.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
5.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
5.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
5.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
5.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
5.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
5.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
5.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
4.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
4.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
4.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
4.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
4.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
4.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
4.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
4.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
4.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
4.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
4.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
4.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
4.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
4.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
4.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
4.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
3.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
3.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
3.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
3.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
3.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
3.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
3.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
3.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
3.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
3.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
3.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
3.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
3.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
3.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
3.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
3.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
3.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
3.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
2.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
2.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
2.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
2.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
2.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
2.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
2.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
2.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
2.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
2.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
2.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
2.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
2.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
2.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
2.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
2.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
2.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
2.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
2.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
1.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
1.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
1.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
1.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
1.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
1.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
1.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
1.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
1.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
1.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
1.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
1.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
1.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
1.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
1.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
1.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
0.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
0.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
0.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
0.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
0.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
0.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
0.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
0.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
0.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
0.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
0.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
0.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
0.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
0.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
0.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TFEC is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
79.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
66.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
56.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
55.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
54.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
52.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
51.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
50.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
48.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
48.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
48.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
48.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
47.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
47.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
46.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
46.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
45.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
44.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
43.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
42.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
42.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
41.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
40.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
40.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
39.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
39.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
39.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
38.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
38.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
38.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
37.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
34.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
33.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
33.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
33.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
32.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
32.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
32.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
32.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
31.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
31.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
31.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
30.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
30.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
30.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
29.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
29.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
29.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
29.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
29.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
29.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
29.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
28.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
27.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
27.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
27.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
27.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
25.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
25.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
25.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
25.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
24.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
23.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
22.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
21.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
21.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
18.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
18.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
17.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
17.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
16.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
16.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
14.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
13.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
13.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
12.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
11.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
11.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
10.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
10.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
10.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
9.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
8.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
7.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
7.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
6.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
6.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
5.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
5.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TFEC is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
118.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
84.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
49.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
45.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
38.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
32.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
32.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
32.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
31.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
31.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
31.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
28.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
28.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
25.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
25.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
24.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
24.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
23.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
23.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
23.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
22.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
21.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
21.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
20.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
20.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
19.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
19.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
19.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
19.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
19.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
18.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
18.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
18.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
18.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
18.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
18.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
18.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
17.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
17.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
17.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
17.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
17.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
16.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
16.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
16.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
15.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
15.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
15.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
15.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
15.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
15.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
14.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
14.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
14.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
14.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
13.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
13.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
13.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
12.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
12.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
12.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
12.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
12.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
12.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
11.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
11.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
11.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
11.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
11.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
10.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
10.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
10.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
10.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
10.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
9.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
9.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
9.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
9.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
9.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
9.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
8.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
8.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
8.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
8.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
8.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
8.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
8.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
7.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
7.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
7.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
7.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
7.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
7.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
7.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
7.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
7.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
7.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
7.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
6.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
6.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
6.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
6.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
6.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
6.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
6.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
6.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
6.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
6.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
6.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
6.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
5.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
5.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
5.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
5.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
5.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
5.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
5.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
5.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
5.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
5.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
5.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
5.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
5.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
5.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
5.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
5.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
4.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
4.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
4.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
4.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
4.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
4.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
4.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
4.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
4.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
4.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
4.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
4.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
4.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
4.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
3.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
3.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
3.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
3.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
3.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
3.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
3.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
3.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
3.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
3.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
3.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
3.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
3.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
2.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
2.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
2.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
2.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
2.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
2.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
2.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
2.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
2.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
2.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
1.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
1.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
1.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
1.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
1.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
1.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
1.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
1.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
1.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
1.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
1.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
1.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
1.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
1.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
1.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
1.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
1.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
1.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
1.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
1.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
1.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
1.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
0.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
0.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
0.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
0.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
0.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
0.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
0.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
0.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
0.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
0.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
0.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
0.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
0.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
0.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
0.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
0.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
