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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MTPN is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
101.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
94.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
82.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
75.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
71.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
70.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
63.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
57.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
56.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
54.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
53.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
51.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
50.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
48.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
48.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
47.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
47.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
47.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
46.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
45.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
43.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
43.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
43.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
43.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
41.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
40.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
40.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
40.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
39.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
38.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
38.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
37.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
37.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
37.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
36.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
35.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
34.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
34.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
34.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
34.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
34.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
34.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
34.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
34.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
33.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
33.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
33.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
33.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
33.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
32.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
32.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
32.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
32.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
31.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
31.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
31.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
31.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
30.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
30.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
30.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
30.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
29.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
29.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
29.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
29.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
29.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
29.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
29.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
28.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
28.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
28.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
28.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
28.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
28.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
28.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
28.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
27.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
27.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
27.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
27.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
26.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
26.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
26.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
26.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
26.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
26.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
26.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
26.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
26.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
26.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
26.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
26.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
26.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
25.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
25.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
25.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
25.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
25.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
25.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
25.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
25.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
25.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
25.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
25.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
24.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
24.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
24.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
24.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
24.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
24.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
24.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
24.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
24.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
24.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
24.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
23.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
23.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
23.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
23.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
23.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
23.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
23.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
23.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
23.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
23.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
23.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
22.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
22.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
22.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
22.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
22.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
22.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
22.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
22.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
22.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
22.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
22.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
22.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
22.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
22.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
22.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
22.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
22.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
21.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
21.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
21.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
21.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
21.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
21.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
21.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
21.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
20.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
20.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
20.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
20.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
20.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
20.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
20.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
20.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
20.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
20.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
20.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
20.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
19.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
19.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
19.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
19.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
19.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
19.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
19.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
19.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
19.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
19.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
19.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
19.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
19.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
18.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
18.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
18.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
18.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
18.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
18.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
18.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
18.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
18.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
18.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
18.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
17.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
17.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
17.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
17.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
17.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
17.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
17.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
17.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
17.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
17.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
17.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
17.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
17.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
17.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
17.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
17.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
17.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
16.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
16.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
16.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
16.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
16.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
16.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
16.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
16.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
16.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
16.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
16.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
16.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
15.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
15.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
15.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
15.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
15.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
15.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
15.5
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
15.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
15.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
15.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
15.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
15.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
15.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
15.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
15.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
15.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
15.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
14.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
14.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
14.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
14.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
14.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
14.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
14.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
14.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
14.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
14.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
14.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
14.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
14.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
14.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
13.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
13.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
13.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
13.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
13.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
13.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
13.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
13.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
13.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
13.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
13.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
13.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
13.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
13.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
13.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
13.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
13.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
13.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
13.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
13.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
13.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
13.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
12.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
12.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
12.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
12.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
12.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
12.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
12.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
12.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
12.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
12.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
12.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
12.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
12.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
12.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
12.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
12.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
12.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
12.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
11.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
11.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
11.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
11.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
11.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
11.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
11.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
10.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
10.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
10.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
10.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
10.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
10.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
10.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
10.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
10.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
10.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
10.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
10.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
10.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
10.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
10.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
10.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
9.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
9.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
9.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
9.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
9.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
9.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
9.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
9.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
9.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
9.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
9.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
9.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
9.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
9.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
8.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
8.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
8.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
8.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
8.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
8.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
8.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
8.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
8.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
8.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
7.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
7.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
7.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
7.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
7.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
6.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
6.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
6.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
6.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
6.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
6.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
5.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
5.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
5.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
5.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
4.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
4.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MTPN is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.0
Number of samples
231
Samples
Sample
Description
TPM
DO45119
0 years, male, NA, stage:3, dead, 510 days
94.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
70.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
66.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
58.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
57.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
54.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
52.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
52.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
51.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
50.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
50.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
50.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
49.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
47.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
46.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
45.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
45.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
44.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
43.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
43.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
43.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
43.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
42.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
42.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
41.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
41.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
41.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
40.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
39.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
39.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
38.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
38.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
37.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
37.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
37.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
37.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
37.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
36.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
36.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
36.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
36.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
36.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
35.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
35.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
35.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
35.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
35.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
35.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
35.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
34.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
34.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
34.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
34.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
34.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
33.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
33.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
32.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
32.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
32.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
32.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
32.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
32.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
32.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
31.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
31.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
31.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
31.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
31.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
31.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
31.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
30.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
30.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
30.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
30.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
30.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
30.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
30.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
30.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
30.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
30.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
29.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
29.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
29.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
29.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
29.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
29.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
28.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
28.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
28.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
28.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
28.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
28.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
27.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
27.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
27.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
27.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
27.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
27.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
27.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
26.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
26.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
26.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
26.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
26.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
26.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
26.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
25.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
25.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
25.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
25.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
25.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
25.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
25.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
25.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
25.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
25.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
25.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
25.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
25.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
25.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
25.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
25.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
24.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
24.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
24.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
24.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
24.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
24.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
24.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
24.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
24.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
24.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
23.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
23.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
23.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
23.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
23.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
23.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
23.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
22.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
22.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
22.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
22.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
22.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
22.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
22.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
22.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
22.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
21.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
21.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
21.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
21.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
20.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
20.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
20.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
20.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
20.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
20.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
20.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
20.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
20.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
20.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
20.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
19.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
19.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
19.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
19.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
19.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
19.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
18.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
18.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
18.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
18.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
18.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
18.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
18.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
18.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
18.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
17.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
17.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
17.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
17.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
17.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
17.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
17.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
17.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
17.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
16.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
16.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
16.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
16.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
16.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
16.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
16.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
16.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
16.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
16.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
15.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
15.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
15.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
15.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
15.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
15.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
15.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
14.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
14.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
14.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
14.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
14.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
13.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
13.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
13.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
13.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
13.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
12.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
12.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
11.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
11.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
11.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
10.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
10.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
10.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
10.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
9.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
9.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
9.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
8.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
8.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
7.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
7.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
7.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
743
Tumor
0.9
425
Tumor
0.7
911
Tumor
0.6
311
Tumor
0.5
777
Tumor
0.5
785
Tumor
0.5
573
Tumor
0.5
171
Tumor
0.4
863
Tumor
0.4
741
Tumor
0.4
283
Tumor
0.4
517
Tumor
0.4
231
Tumor
0.4
1027
Tumor
0.4
877
Tumor
0.4
351
Tumor
0.3
375
Tumor
0.3
257
Tumor
0.3
481
Tumor
0.3
387
Tumor
0.3
851
Tumor
0.3
727
Tumor
0.3
131
Tumor
0.3
661
Tumor
0.3
724
Normal
0.3
1015
Tumor
0.3
125
Tumor
0.3
815
Tumor
0.3
861
Tumor
0.3
461
Tumor
0.3
137
Tumor
0.2
327
Tumor
0.2
953
Tumor
0.2
261
Tumor
0.2
223
Tumor
0.2
635
Tumor
0.2
943
Tumor
0.2
211
Tumor
0.2
915
Tumor
0.2
746
Normal
0.2
816
Normal
0.2
952
Normal
0.2
1043
Tumor
0.2
515
Tumor
0.2
365
Tumor
0.2
755
Tumor
0.2
883
Tumor
0.2
1013
Tumor
0.1
745
Tumor
0.1
721
Tumor
0.1
185
Tumor
0.1
685
Tumor
0.1
455
Tumor
0.1
867
Tumor
0.1
977
Tumor
0.1
715
Tumor
0.1
1021
Tumor
0.1
411
Tumor
0.1
695
Tumor
0.1
434
Normal
0.1
737
Tumor
0.1
285
Tumor
0.1
447
Tumor
0.1
914
Normal
0.1
738
Normal
0.1
431
Tumor
0.1
451
Tumor
0.1
716
Normal
0.1
147
Tumor
0.1
135
Tumor
0.1
742
Normal
0.1
297
Tumor
0.1
462
Normal
0.0
744
Normal
0.0
435
Tumor
0.0
917
Tumor
0.0
728
Normal
0.0
518
Normal
0.0
874
Normal
0.0
965
Tumor
0.0
525
Tumor
0.0
881
Tumor
0.0
271
Tumor
0.0
363
Tumor
0.0
723
Tumor
0.0
567
Tumor
0.0
686
Normal
0.0
124
Normal
0.0
714
Normal
0.0
647
Tumor
0.0
865
Tumor
0.0
421
Tumor
0.0
878
Normal
0.0
343
Tumor
0.0
497
Tumor
0.0
823
Tumor
0.0
478
Normal
0.0
482
Normal
0.0
814
Normal
0.0
778
Normal
0.0
195
Tumor
0.0
722
Normal
0.0
698
Normal
-0.1
213
Tumor
-0.1
386
Normal
-0.1
192
Normal
-0.1
161
Tumor
-0.1
516
Normal
-0.1
313
Tumor
-0.1
474
Normal
-0.1
696
Normal
-0.1
126
Normal
-0.1
713
Tumor
-0.1
483
Tumor
-0.1
416
Normal
-0.1
813
Tumor
-0.1
328
Normal
-0.1
391
Tumor
-0.1
472
Normal
-0.1
513
Tumor
-0.1
536
Normal
-0.1
355
Tumor
-0.1
955
Tumor
-0.1
963
Tumor
-0.1
473
Tumor
-0.1
268
Normal
-0.1
966
Normal
-0.1
1016
Normal
-0.1
493
Tumor
-0.1
913
Tumor
-0.1
535
Tumor
-0.1
1026
Normal
-0.1
262
Normal
-0.1
951
Tumor
-0.1
433
Tumor
-0.1
487
Tumor
-0.1
663
Tumor
-0.1
448
Normal
-0.1
1045
Tumor
-0.1
852
Normal
-0.1
956
Normal
-0.1
258
Normal
-0.1
423
Tumor
-0.1
523
Tumor
-0.1
862
Normal
-0.2
138
Normal
-0.2
123
Tumor
-0.2
367
Tumor
-0.2
412
Normal
-0.2
228
Normal
-0.2
188
Normal
-0.2
127
Tumor
-0.2
217
Tumor
-0.2
224
Normal
-0.2
975
Tumor
-0.2
477
Tumor
-0.2
491
Tumor
-0.2
142
Normal
-0.2
983
Tumor
-0.2
444
Normal
-0.2
342
Normal
-0.2
864
Normal
-0.2
272
Normal
-0.2
114
Normal
-0.2
111
Normal
-0.2
344
Normal
-0.2
366
Normal
-0.2
284
Normal
-0.2
615
Tumor
-0.2
286
Normal
-0.2
443
Tumor
-0.2
362
Normal
-0.2
1022
Normal
-0.2
187
Tumor
-0.2
427
Tumor
-0.2
426
Normal
-0.2
422
Normal
-0.2
817
Tumor
-0.2
671
Tumor
-0.2
432
Normal
-0.2
866
Normal
-0.2
527
Tumor
-0.2
232
Normal
-0.2
141
Tumor
-0.2
136
Normal
-0.2
186
Normal
-0.2
526
Normal
-0.2
364
Normal
-0.2
617
Tumor
-0.2
277
Tumor
-0.3
468
Normal
-0.3
665
Tumor
-0.3
356
Normal
-0.3
471
Tumor
-0.3
954
Normal
-0.3
465
Tumor
-0.3
361
Tumor
-0.3
352
Normal
-0.3
312
Normal
-0.3
524
Normal
-0.3
396
Normal
-0.3
368
Normal
-0.3
662
Normal
-0.3
452
Normal
-0.3
278
Normal
-0.3
456
Normal
-0.3
383
Tumor
-0.3
857
Tumor
-0.3
436
Normal
-0.3
146
Normal
-0.3
385
Tumor
-0.3
415
Tumor
-0.3
1041
Tumor
-0.3
528
Normal
-0.3
824
Normal
-0.3
445
Tumor
-0.3
858
Normal
-0.3
113
Tumor
-0.3
944
Normal
-0.3
354
Normal
-0.3
697
Tumor
-0.3
212
Normal
-0.3
267
Tumor
-0.3
492
Normal
-0.3
393
Tumor
-0.3
128
Normal
-0.3
984
Normal
-0.3
1028
Normal
-0.3
341
Tumor
-0.3
968
Normal
-0.3
132
Normal
-0.3
882
Normal
-0.3
218
Normal
-0.3
467
Tumor
-0.3
923
Tumor
-0.3
358
Normal
-0.3
353
Tumor
-0.3
938
Normal
-0.3
924
Normal
-0.3
664
Normal
-0.3
545
Tumor
-0.3
538
Normal
-0.3
818
Normal
-0.3
925
Tumor
-0.3
394
Normal
-0.3
298
Normal
-0.4
466
Normal
-0.4
148
Normal
-0.4
873
Tumor
-0.4
537
Tumor
-0.4
227
Tumor
-0.4
145
Tumor
-0.4
395
Tumor
-0.4
546
Normal
-0.4
376
Normal
-0.4
464
Normal
-0.4
392
Normal
-0.4
571
Tumor
-0.4
498
Normal
-0.4
921
Tumor
-0.4
463
Tumor
-0.4
982
Normal
-0.4
1044
Normal
-0.4
976
Normal
-0.4
557
Tumor
-0.4
642
Normal
-0.4
172
Normal
-0.4
413
Tumor
-0.4
868
Normal
-0.4
214
Normal
-0.4
428
Normal
-0.4
627
Tumor
-0.4
446
Normal
-0.4
666
Normal
-0.4
162
Normal
-0.4
648
Normal
-0.4
981
Tumor
-0.4
916
Normal
-0.4
112
Tumor
-0.4
574
Normal
-0.4
1031
Tumor
-0.4
884
Normal
-0.5
191
Tumor
-0.5
514
Normal
-0.5
568
Normal
-0.5
563
Tumor
-0.5
414
Normal
-0.5
388
Normal
-0.5
534
Normal
-0.5
554
Normal
-0.5
786
Normal
-0.5
384
Normal
-0.5
672
Normal
-0.5
357
Tumor
-0.5
424
Normal
-0.5
533
Tumor
-0.5
918
Normal
-0.5
1042
Normal
-0.5
332
Normal
-0.5
1014
Normal
-0.5
196
Normal
-0.6
978
Normal
-0.6
756
Normal
-0.6
331
Tumor
-0.6
937
Tumor
-0.6
222
Normal
-0.6
618
Normal
-0.6
494
Normal
-0.6
488
Normal
-0.6
967
Tumor
-0.6
564
Normal
-0.6
964
Normal
-0.7
484
Normal
-0.7
641
Tumor
-0.7
1046
Normal
-0.7
221
Tumor
-0.7
912
Normal
-0.7
957
Tumor
-0.7
922
Normal
-0.7
628
Normal
-0.7
558
Normal
-0.7
1025
Tumor
-0.7
926
Normal
-0.8
572
Normal
-0.8
1032
Normal
-0.8
553
Tumor
-0.8
636
Normal
-0.8
314
Normal
-0.9
958
Normal
-0.9
616
Normal
-1.2
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
