HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:19.3 nTPM
HPA Brain:20.6 nTPM
GTEx:19.3 nTPM
FANTOM5:21.7 Scaled Tags Per Million
Pig:25.3 nTPM
Mouse:18.1 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041870Antibody HPA048093
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 20.6
Sample id Sample description nTPM
Hippocampus
nTPM: 19.5
1898 Male, age 80, left hemisphere 21.6
1855 Male, age 76, left hemisphere 21.0
1911 Female, age 85, right hemisphere 19.3
2148 Female, age 91, left hemisphere 18.5
2529 Female, age 94, left hemisphere 18.5
2621 Female, age 67, right hemisphere 18.4
Dentate gyrus
nTPM: 18.7
2010 Male, age 76, both hemispheres 19.7
2530 Female, age 94, left hemisphere 19.6
1927 Female, age 91, both hemispheres 19.3
2531 Female, age 67, both hemispheres 18.9
2528 Male, age 74, both hemispheres 17.6
2246 Female, age 85, both hemispheres 17.0
Entorhinal gyrus
nTPM: 16.8
2764 Male, age 80, right hemisphere 19.4
1787 Male, age 76, left hemisphere 18.9
2117 Female, age 91, right hemisphere 18.7
1938 Female, age 85, left hemisphere 17.1
2613 Female, age 94, left hemisphere 14.1
2686 Male, age 75, right hemisphere 12.4
Hippocampus, CA1
nTPM: 20.6
2749 Male, age 80, left hemisphere 29.7
2045 Male, age 76, both hemispheres 19.9
1873 Female, age 85, both hemispheres 18.6
2527 Male, age 74, both hemispheres 17.7
2082 Female, age 91, right hemisphere 17.3
Hippocampus, CA2
nTPM: 19.7
1963 Male, age 80, left hemisphere 25.4
1892 Male, age 76, both hemispheres 23.5
2249 Male, age 74, both hemispheres 20.7
1940 Female, age 85, left hemisphere 17.2
2437 Female, age 94, left hemisphere 15.8
2113 Female, age 91, right hemisphere 15.5
Hippocampus, CA3
nTPM: 19.3
1867 Male, age 76, both hemispheres 22.7
2620 Female, age 94, left hemisphere 21.0
2137 Male, age 80, left hemisphere 20.7
2436 Male, age 74, both hemispheres 18.8
2861 Female, age 67, both hemispheres 17.2
1891 Female, age 85, both hemispheres 15.6
Parahippocampal cortex
nTPM: 15.6
1933 Female, age 85, both hemispheres 20.9
1990 Female, age 91, right hemisphere 17.6
2245 Female, age 91, both hemispheres 17.2
1850 Male, age 80, both hemispheres 16.5
2250 Female, age 67, right hemisphere 16.3
2018 Male, age 76, both hemispheres 15.4
2532 Female, age 72, left hemisphere 15.4
2622 Female, age 67, right hemisphere 14.2
2692 Male, age 74, both hemispheres 11.3
2693 Female, age 94, both hemispheres 11.3
Perirhinal gyrus
nTPM: 16.7
1847 Female, age 91, left hemisphere 18.0
1841 Female, age 85, right hemisphere 17.1
1794 Male, age 80, right hemisphere 16.7
2521 Female, age 94, right hemisphere 15.9
2848 Male, age 76, right hemisphere 15.5
Subiculum
nTPM: 16.7
2042 Male, age 76, both hemispheres 19.5
1901 Male, age 80, both hemispheres 18.1
2729 Female, age 91, right hemisphere 17.7
1977 Female, age 85, both hemispheres 17.4
2619 Male, age 74, both hemispheres 16.7
2438 Female, age 94, left hemisphere 10.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 19.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.3
Samples: 197

Max nTPM: 37.0
Min nTPM: 8.4
Std nTPM: 5.5
Median nTPM: 18.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 37.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 34.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 33.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 33.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 32.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 31.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 29.9
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 29.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 29.4
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 29.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 28.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 21.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.7
FF:10169-103B7 60 years, female 25.9
FF:10153-102I9 76 years, female 17.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 25.3
Pig sample Sample description nTPM
Subiculum
nTPM: 18.6
Samples: 4

Max nTPM: 24.1
Min nTPM: 15.2
Sample A Female 24.1
Sample B Female 15.2
Sample C Male 19.0
Sample D Male 16.2
Dorsal hippocampus
nTPM: 25.3
Samples: 4

Max nTPM: 35.0
Min nTPM: 21.6
Sample A Female 35.0
Sample B Female 22.6
Sample C Male 22.1
Sample D Male 21.6
Entorhinal cortex
nTPM: 19.0
Samples: 4

Max nTPM: 21.6
Min nTPM: 16.5
Sample A Female 21.6
Sample B Female 19.8
Sample C Male 18.2
Sample D Male 16.5
Ventral hippocampus
nTPM: 22.2
Samples: 4

Max nTPM: 27.5
Min nTPM: 14.1
Sample A Female 22.1
Sample B Female 14.1
Sample C Male 25.2
Sample D Male 27.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 18.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.1
Samples: 4

Max nTPM: 19.9
Min nTPM: 16.4
Sample A Male 19.2
Sample B Male 19.9
Sample C Female 16.7
Sample D Female 16.4
Hippocampal formation
nTPM: 16.6
Samples: 4

Max nTPM: 18.0
Min nTPM: 15.0
Sample A Male 18.0
Sample B Male 16.8
Sample C Female 15.0
Sample D Female 16.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
70566145 Antisense, RP_050628_02_D07, Mouse strain C57BL/6J (56 days, male) 0.6

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