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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPE is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
226.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
338.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
336.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
317.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
315.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
315.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
301.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
298.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
297.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
291.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
286.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
286.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
284.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
282.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
280.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
274.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
273.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
257.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
252.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
249.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
247.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
242.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
242.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
240.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
239.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
239.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
239.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
237.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
236.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
236.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
234.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
234.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
229.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
227.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
224.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
223.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
222.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
221.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
218.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
217.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
216.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
215.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
213.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
208.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
208.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
203.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
203.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
200.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
200.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
199.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
197.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
195.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
193.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
187.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
186.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
172.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
162.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
137.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
136.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
133.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
129.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
121.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
107.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
99.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPE is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
125.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
375.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
300.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
300.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
273.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
262.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
255.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
249.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
227.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
225.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
217.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
212.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
205.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
202.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
200.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
198.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
197.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
193.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
192.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
191.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
189.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
189.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
188.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
187.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
187.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
186.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
185.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
184.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
183.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
181.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
180.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
180.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
179.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
179.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
179.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
179.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
179.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
178.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
178.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
178.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
177.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
177.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
177.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
177.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
176.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
176.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
174.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
174.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
174.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
174.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
174.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
173.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
173.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
173.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
173.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
172.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
172.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
172.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
171.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
170.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
170.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
168.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
167.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
166.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
166.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
165.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
165.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
164.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
164.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
163.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
163.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
162.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
162.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
161.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
161.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
160.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
160.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
160.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
159.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
159.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
159.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
159.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
159.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
158.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
158.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
157.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
157.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
157.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
157.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
156.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
155.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
155.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
155.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
154.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
154.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
153.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
153.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
152.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
152.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
152.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
151.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
151.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
151.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
151.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
150.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
150.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
150.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
150.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
149.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
149.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
149.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
149.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
149.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
148.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
148.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
148.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
147.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
147.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
147.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
147.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
146.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
146.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
145.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
145.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
145.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
145.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
145.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
144.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
144.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
144.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
144.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
144.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
143.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
143.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
143.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
143.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
143.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
142.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
142.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
142.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
141.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
141.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
141.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
140.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
140.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
139.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
139.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
139.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
138.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
138.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
138.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
137.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
137.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
137.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
137.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
137.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
137.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
137.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
137.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
136.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
136.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
136.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
136.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
136.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
136.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
135.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
135.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
135.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
135.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
135.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
135.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
134.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
134.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
134.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
134.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
134.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
134.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
134.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
134.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
134.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
134.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
133.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
133.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
133.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
133.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
133.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
133.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
132.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
132.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
132.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
132.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
132.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
132.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
132.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
132.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
132.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
132.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
132.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
132.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
132.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
131.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
131.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
131.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
131.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
131.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
131.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
131.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
130.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
130.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
130.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
130.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
129.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
129.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
128.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
128.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
128.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
128.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
128.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
127.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
127.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
127.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
127.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
126.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
126.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
126.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
126.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
125.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
125.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
125.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
124.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
124.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
124.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
124.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
123.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
123.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
123.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
123.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
123.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
123.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
122.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
122.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
122.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
122.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
121.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
121.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
121.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
121.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
121.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
121.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
121.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
121.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
121.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
120.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
120.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
120.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
120.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
120.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
120.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
120.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
120.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
120.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
120.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
120.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
119.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
119.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
119.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
119.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
119.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
119.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
119.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
119.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
118.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
118.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
118.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
118.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
118.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
118.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
117.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
117.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
117.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
117.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
117.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
117.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
117.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
117.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
117.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
116.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
116.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
116.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
116.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
116.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
116.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
116.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
116.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
116.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
115.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
115.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
115.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
115.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
115.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
115.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
114.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
114.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
114.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
114.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
114.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
113.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
113.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
113.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
113.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
113.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
113.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
112.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
112.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
112.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
112.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
112.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
112.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
112.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
112.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
111.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
111.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
111.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
111.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
110.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
110.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
110.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
110.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
110.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
110.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
110.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
110.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
110.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
110.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
109.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
109.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
109.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
109.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
109.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
109.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
109.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
109.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
109.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
109.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
108.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
108.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
108.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
108.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
108.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
108.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
108.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
107.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
107.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
107.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
107.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
107.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
107.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
106.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
106.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
106.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
106.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
106.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
105.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
105.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
105.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
105.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
105.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
105.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
105.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
105.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
104.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
104.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
104.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
104.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
104.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
104.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
104.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
104.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
104.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
104.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
104.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
104.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
103.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
103.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
103.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
103.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
103.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
103.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
102.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
102.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
102.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
102.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
101.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
101.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
101.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
101.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
101.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
101.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
101.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
101.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
101.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
100.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
100.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
100.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
100.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
99.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
99.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
99.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
99.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
99.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
99.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
99.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
98.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
98.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
98.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
98.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
98.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
97.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
97.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
97.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
97.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
97.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
97.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
96.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
96.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
96.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
96.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
96.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
95.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
95.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
95.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
95.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
94.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
94.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
94.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
93.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
93.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
93.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
92.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
92.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
92.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
92.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
92.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
92.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
92.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
91.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
91.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
91.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
91.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
91.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
90.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
90.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
90.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
90.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
90.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
89.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
89.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
89.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
89.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
89.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
89.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
89.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
89.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
88.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
88.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
88.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
88.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
88.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
87.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
87.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
86.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
86.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
85.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
85.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
85.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
85.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
85.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
84.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
84.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
84.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
84.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
83.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
83.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
83.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
82.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
82.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
80.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
80.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
80.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
79.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
79.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
79.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
77.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
77.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
77.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
77.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
77.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
76.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
76.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
76.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
75.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
74.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
73.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
73.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
73.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
73.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
72.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
71.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
71.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
69.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
67.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
66.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
66.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
65.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
65.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
64.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
64.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
49.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
38.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
28.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
16.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPE is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
110.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
219.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
210.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
202.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
188.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
185.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
163.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
163.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
161.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
158.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
151.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
146.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
145.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
145.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
143.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
140.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
139.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
138.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
136.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
135.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
132.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
131.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
129.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
127.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
126.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
125.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
125.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
122.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
122.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
122.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
121.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
121.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
120.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
120.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
119.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
118.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
115.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
115.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
114.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
114.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
113.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
113.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
112.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
112.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
109.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
109.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
109.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
108.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
107.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
107.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
106.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
106.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
104.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
103.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
101.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
101.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
100.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
100.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
100.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
100.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
100.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
100.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
99.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
99.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
98.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
98.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
98.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
97.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
97.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
97.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
95.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
94.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
94.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
93.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
92.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
92.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
91.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
90.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
90.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
90.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
88.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
88.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
87.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
87.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
87.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
86.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
84.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
83.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
81.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
79.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
79.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
74.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
64.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
63.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
62.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
61.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
48.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
48.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
44.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
43.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPE is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
165.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
286.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
284.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
282.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
277.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
277.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
264.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
260.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
245.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
245.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
244.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
243.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
242.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
240.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
239.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
238.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
234.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
233.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
232.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
230.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
228.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
226.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
225.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
225.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
224.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
224.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
224.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
222.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
220.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
220.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
220.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
220.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
219.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
215.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
215.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
214.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
214.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
213.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
213.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
213.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
212.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
211.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
210.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
208.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
208.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
208.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
207.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
206.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
206.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
203.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
203.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
202.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
200.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
200.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
199.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
199.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
198.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
198.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
198.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
197.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
197.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
197.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
196.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
195.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
195.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
195.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
195.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
195.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
193.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
192.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
192.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
192.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
192.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
191.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
191.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
191.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
189.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
189.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
188.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
188.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
187.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
187.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
186.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
186.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
186.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
186.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
185.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
185.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
185.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
184.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
184.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
184.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
184.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
183.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
182.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
182.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
181.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
181.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
181.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
181.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
179.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
179.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
179.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
178.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
178.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
177.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
177.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
176.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
175.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
175.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
174.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
173.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
173.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
173.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
172.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
172.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
172.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
172.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
172.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
171.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
171.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
171.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
170.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
170.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
169.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
169.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
168.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
167.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
167.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
166.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
166.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
166.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
166.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
166.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
166.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
165.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
165.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
165.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
165.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
165.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
164.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
163.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
163.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
163.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
163.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
163.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
162.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
162.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
161.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
160.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
160.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
160.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
160.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
159.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
159.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
159.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
159.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
159.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
159.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
158.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
158.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
158.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
157.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
157.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
156.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
154.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
154.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
154.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
153.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
153.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
153.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
153.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
152.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
152.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
152.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
151.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
151.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
150.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
149.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
149.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
149.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
149.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
148.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
148.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
148.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
147.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
146.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
144.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
144.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
144.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
143.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
143.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
143.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
142.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
142.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
142.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
141.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
141.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
141.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
140.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
140.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
140.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
140.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
140.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
140.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
140.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
139.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
139.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
139.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
139.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
138.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
138.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
137.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
137.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
137.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
136.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
136.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
136.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
135.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
135.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
134.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
134.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
133.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
133.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
133.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
132.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
132.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
132.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
132.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
131.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
131.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
131.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
130.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
130.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
130.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
129.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
128.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
128.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
128.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
127.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
127.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
125.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
125.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
125.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
124.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
124.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
121.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
119.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
118.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
118.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
117.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
112.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
111.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
110.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
110.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
108.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
107.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
106.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
105.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
104.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
104.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
104.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
103.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
102.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
101.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
100.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
96.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
96.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
96.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
95.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
94.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
92.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
90.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
85.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
84.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
83.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
83.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
82.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
76.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
71.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
46.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
40.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
24.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.7
CPT0017410003
Tumor
0.5
CPT0079180003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0001180009
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0076330003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0002270011
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0078510003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0023350003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0078830003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0002350011
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0078660003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0076350001
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0066470004
Tumor
0.1
CPT0084590001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0006440003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0077500001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0000790001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0011240003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0001190001
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0064400001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0088480003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0025350003
Tumor
-0.1
CPT0075130003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0001350001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0088900003
Tumor
-0.2
CPT0092740003
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0021240003
Tumor
-0.2
CPT0025920001
Normal
-0.2
CPT0088630003
Tumor
-0.2
CPT0019130003
Tumor
-0.2
CPT0079230003
Tumor
-0.3
CPT0088970003
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.