HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:67.5 nTPM
HPA Brain:25.1 nTPM
GTEx:67.5 nTPM
FANTOM5:28.0 Scaled Tags Per Million
Pig:33.9 nTPM
Mouse:26.1 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034958
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 25.1
Sample id Sample description nTPM
Hippocampus
nTPM: 25.1
1855 Male, age 76, left hemisphere 31.9
2621 Female, age 67, right hemisphere 30.8
2529 Female, age 94, left hemisphere 24.9
2148 Female, age 91, left hemisphere 22.5
1911 Female, age 85, right hemisphere 21.7
1898 Male, age 80, left hemisphere 18.7
Dentate gyrus
nTPM: 21.2
2530 Female, age 94, left hemisphere 28.6
2531 Female, age 67, both hemispheres 23.7
2246 Female, age 85, both hemispheres 22.7
2010 Male, age 76, both hemispheres 18.4
2528 Male, age 74, both hemispheres 17.3
1927 Female, age 91, both hemispheres 16.3
Entorhinal gyrus
nTPM: 18.4
2764 Male, age 80, right hemisphere 22.7
2686 Male, age 75, right hemisphere 22.3
1938 Female, age 85, left hemisphere 20.0
2613 Female, age 94, left hemisphere 18.3
1787 Male, age 76, left hemisphere 15.0
2117 Female, age 91, right hemisphere 12.0
Hippocampus, CA1
nTPM: 19.9
2045 Male, age 76, both hemispheres 22.3
1873 Female, age 85, both hemispheres 21.1
2527 Male, age 74, both hemispheres 21.0
2082 Female, age 91, right hemisphere 18.4
2749 Male, age 80, left hemisphere 16.9
Hippocampus, CA2
nTPM: 20.2
1940 Female, age 85, left hemisphere 23.6
1892 Male, age 76, both hemispheres 23.1
2113 Female, age 91, right hemisphere 22.0
2437 Female, age 94, left hemisphere 20.3
1963 Male, age 80, left hemisphere 17.2
2249 Male, age 74, both hemispheres 15.0
Hippocampus, CA3
nTPM: 23.2
2861 Female, age 67, both hemispheres 34.3
1867 Male, age 76, both hemispheres 25.1
2620 Female, age 94, left hemisphere 23.5
2137 Male, age 80, left hemisphere 21.8
1891 Female, age 85, both hemispheres 19.6
2436 Male, age 74, both hemispheres 15.2
Parahippocampal cortex
nTPM: 21.8
2622 Female, age 67, right hemisphere 27.0
1933 Female, age 85, both hemispheres 26.4
2245 Female, age 91, both hemispheres 26.3
2532 Female, age 72, left hemisphere 22.5
2250 Female, age 67, right hemisphere 20.8
2018 Male, age 76, both hemispheres 20.0
2693 Female, age 94, both hemispheres 19.7
1850 Male, age 80, both hemispheres 19.1
1990 Female, age 91, right hemisphere 18.2
2692 Male, age 74, both hemispheres 18.1
Perirhinal gyrus
nTPM: 21.2
1841 Female, age 85, right hemisphere 24.6
1794 Male, age 80, right hemisphere 22.1
1847 Female, age 91, left hemisphere 21.5
2521 Female, age 94, right hemisphere 21.2
2848 Male, age 76, right hemisphere 16.4
Subiculum
nTPM: 20.5
2438 Female, age 94, left hemisphere 28.3
2042 Male, age 76, both hemispheres 23.1
1901 Male, age 80, both hemispheres 20.1
2729 Female, age 91, right hemisphere 18.2
1977 Female, age 85, both hemispheres 16.6
2619 Male, age 74, both hemispheres 16.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 67.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 67.5
Samples: 197

Max nTPM: 212.9
Min nTPM: 21.8
Std nTPM: 26.4
Median nTPM: 61.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 212.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 199.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 165.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 140.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 132.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 130.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 128.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 123.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 115.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 115.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 113.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 28.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.0
FF:10169-103B7 60 years, female 28.0
FF:10153-102I9 76 years, female 28.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 33.9
Pig sample Sample description nTPM
Subiculum
nTPM: 29.7
Samples: 4

Max nTPM: 41.9
Min nTPM: 24.6
Sample A Female 41.9
Sample B Female 24.6
Sample C Male 26.2
Sample D Male 25.9
Dorsal hippocampus
nTPM: 33.9
Samples: 4

Max nTPM: 42.2
Min nTPM: 27.5
Sample A Female 42.2
Sample B Female 28.4
Sample C Male 37.6
Sample D Male 27.5
Entorhinal cortex
nTPM: 33.4
Samples: 4

Max nTPM: 35.4
Min nTPM: 31.8
Sample A Female 33.1
Sample B Female 35.4
Sample C Male 33.1
Sample D Male 31.8
Ventral hippocampus
nTPM: 30.9
Samples: 4

Max nTPM: 36.6
Min nTPM: 22.1
Sample A Female 30.9
Sample B Female 22.1
Sample C Male 36.6
Sample D Male 34.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 26.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.7
Samples: 4

Max nTPM: 25.5
Min nTPM: 22.2
Sample A Male 22.3
Sample B Male 24.9
Sample C Female 25.5
Sample D Female 22.2
Hippocampal formation
nTPM: 26.1
Samples: 4

Max nTPM: 28.7
Min nTPM: 23.8
Sample A Male 28.7
Sample B Male 24.5
Sample C Female 23.8
Sample D Female 27.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
69170270 Antisense, RP_050329_01_A06, Mouse strain C57BL/6J (56 days, male) 6.6
80472079 Antisense, RP_070219_01_C08, Mouse strain C57BL/6J (56 days, male) 1.6

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