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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP2R1A is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
127.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
764.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
567.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
452.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
383.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
373.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
367.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
303.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
300.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
291.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
290.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
289.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
284.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
284.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
283.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
280.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
277.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
267.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
265.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
262.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
255.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
253.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
252.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
241.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
238.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
238.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
235.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
234.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
228.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
226.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
222.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
221.2
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
220.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
214.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
214.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
212.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
212.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
211.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
210.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
206.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
205.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
205.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
202.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
201.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
200.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
195.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
194.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
194.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
192.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
192.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
192.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
190.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
190.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
188.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
185.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
185.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
184.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
183.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
183.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
181.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
179.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
178.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
170.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
166.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
164.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
163.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
163.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
162.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
161.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
161.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
160.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
159.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
159.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
158.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
158.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
158.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
157.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
157.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
157.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
156.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
156.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
155.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
155.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
154.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
154.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
153.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
153.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
153.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
152.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
152.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
151.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
151.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
151.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
150.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
146.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
146.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
146.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
145.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
145.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
145.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
144.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
144.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
144.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
143.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
143.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
142.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
141.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
140.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
139.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
139.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
138.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
137.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
136.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
135.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
134.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
134.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
133.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
132.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
132.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
131.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
130.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
129.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
129.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
128.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
128.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
128.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
127.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
127.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
127.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
127.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
126.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
126.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
126.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
124.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
124.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
123.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
123.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
122.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
122.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
122.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
121.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
121.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
120.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
120.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
120.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
120.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
119.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
119.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
119.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
119.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
118.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
118.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
118.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
117.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
117.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
117.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
117.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
117.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
117.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
117.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
117.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
116.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
116.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
116.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
116.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
115.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
114.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
114.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
113.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
113.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
113.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
113.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
112.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
111.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
111.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
110.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
110.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
109.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
109.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
109.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
109.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
109.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
109.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
109.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
108.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
108.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
107.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
107.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
107.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
106.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
106.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
106.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
106.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
106.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
106.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
105.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
105.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
105.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
104.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
104.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
104.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
104.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
103.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
103.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
103.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
103.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
103.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
102.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
102.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
101.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
101.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
101.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
101.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
100.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
100.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
100.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
97.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
97.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
97.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
96.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
96.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
96.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
96.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
95.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
95.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
94.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
93.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
93.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
91.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
91.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
91.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
91.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
91.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
91.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
91.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
91.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
90.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
90.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
90.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
90.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
90.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
90.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
89.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
89.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
88.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
88.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
88.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
88.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
88.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
87.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
87.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
87.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
86.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
86.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
86.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
86.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
85.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
85.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
85.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
84.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
84.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
84.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
83.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
83.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
83.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
83.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
83.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
83.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
83.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
82.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
82.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
82.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
81.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
81.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
81.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
80.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
80.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
80.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
80.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
80.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
80.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
79.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
79.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
79.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
79.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
79.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
79.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
79.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
79.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
78.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
78.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
77.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
77.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
77.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
77.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
77.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
77.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
76.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
76.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
76.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
76.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
76.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
75.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
75.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
75.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
75.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
75.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
75.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
74.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
74.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
73.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
73.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
73.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
73.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
73.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
72.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
71.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
70.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
70.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
70.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
69.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
69.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
69.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
68.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
68.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
67.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
67.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
66.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
66.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
66.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
65.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
65.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
65.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
65.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
65.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
64.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
63.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
63.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
62.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
61.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
60.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
60.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
60.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
60.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
59.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
59.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
59.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
58.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
58.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
58.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
57.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
56.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
55.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
54.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
53.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
52.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
52.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
52.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
50.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
47.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
43.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
41.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP2R1A is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
63.6
Number of samples
231
Samples
Sample
Description
TPM
DO45289
0 years, female, NA, stage:3, alive, 360 days
204.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
190.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
186.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
181.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
171.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
168.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
162.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
146.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
141.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
136.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
135.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
126.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
123.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
122.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
117.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
117.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
116.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
112.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
112.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
106.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
103.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
102.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
100.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
99.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
97.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
97.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
97.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
96.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
96.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
96.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
95.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
94.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
92.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
92.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
91.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
91.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
90.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
89.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
86.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
85.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
85.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
81.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
81.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
80.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
80.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
79.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
79.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
78.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
76.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
76.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
76.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
75.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
75.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
75.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
75.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
73.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
73.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
73.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
72.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
72.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
71.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
71.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
71.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
70.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
70.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
70.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
70.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
69.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
69.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
68.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
68.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
68.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
68.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
67.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
67.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
67.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
67.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
66.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
66.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
65.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
65.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
64.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
64.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
64.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
64.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
64.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
63.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
63.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
62.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
62.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
62.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
62.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
62.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
61.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
61.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
61.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
61.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
60.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
59.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
59.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
59.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
59.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
58.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
58.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
58.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
58.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
58.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
57.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
57.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
57.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
56.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
56.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
55.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
55.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
55.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
55.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
55.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
54.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
54.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
54.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
54.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
54.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
54.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
53.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
53.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
53.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
53.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
53.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
52.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
52.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
52.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
51.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
51.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
51.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
51.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
51.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
51.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
50.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
50.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
50.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
49.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
49.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
49.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
49.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
49.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
49.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
48.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
48.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
47.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
47.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
47.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
47.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
46.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
46.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
46.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
46.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
46.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
46.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
45.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
45.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
45.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
44.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
44.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
44.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
44.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
44.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
43.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
43.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
43.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
43.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
43.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
42.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
42.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
42.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
42.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
42.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
42.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
41.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
41.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
41.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
41.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
41.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
41.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
41.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
40.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
39.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
39.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
39.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
39.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
39.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
38.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
38.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
38.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
38.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
38.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
37.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
37.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
37.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
36.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
36.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
36.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
36.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
36.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
36.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
36.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
36.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
35.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
35.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
34.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
34.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
34.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
34.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
33.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
33.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
33.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
33.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
32.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
31.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
31.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
30.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
29.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
28.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
28.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
28.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
27.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
27.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
26.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
24.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
24.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
22.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
22.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
147
Tumor
0.5
112
Tumor
0.4
1027
Tumor
0.4
375
Tumor
0.3
285
Tumor
0.3
425
Tumor
0.3
635
Tumor
0.3
277
Tumor
0.3
663
Tumor
0.3
695
Tumor
0.3
128
Normal
0.3
342
Normal
0.3
877
Tumor
0.2
433
Tumor
0.2
124
Normal
0.2
358
Normal
0.2
125
Tumor
0.2
571
Tumor
0.2
111
Normal
0.2
113
Tumor
0.2
222
Normal
0.2
114
Normal
0.2
218
Normal
0.2
131
Tumor
0.2
617
Tumor
0.2
745
Tumor
0.2
196
Normal
0.2
952
Normal
0.2
436
Normal
0.2
451
Tumor
0.2
186
Normal
0.2
426
Normal
0.2
214
Normal
0.1
123
Tumor
0.1
192
Normal
0.1
743
Tumor
0.1
491
Tumor
0.1
557
Tumor
0.1
126
Normal
0.1
533
Tumor
0.1
313
Tumor
0.1
452
Normal
0.1
272
Normal
0.1
463
Tumor
0.1
393
Tumor
0.1
362
Normal
0.1
911
Tumor
0.1
354
Normal
0.1
353
Tumor
0.1
368
Normal
0.1
567
Tumor
0.1
298
Normal
0.1
977
Tumor
0.1
497
Tumor
0.1
914
Normal
0.1
813
Tumor
0.1
422
Normal
0.1
746
Normal
0.1
376
Normal
0.1
955
Tumor
0.1
1025
Tumor
0.1
132
Normal
0.1
685
Tumor
0.1
627
Tumor
0.1
434
Normal
0.1
271
Tumor
0.1
741
Tumor
0.1
357
Tumor
0.1
231
Tumor
0.1
213
Tumor
0.1
385
Tumor
0.1
865
Tumor
0.1
217
Tumor
0.1
392
Normal
0.1
262
Normal
0.1
618
Normal
0.1
257
Tumor
0.1
188
Normal
0.1
414
Normal
0.1
446
Normal
0.1
863
Tumor
0.1
344
Normal
0.1
386
Normal
0.1
411
Tumor
0.1
465
Tumor
0.1
366
Normal
0.1
515
Tumor
0.1
431
Tumor
0.1
777
Tumor
0.1
742
Normal
0.1
187
Tumor
0.1
427
Tumor
0.1
862
Normal
0.1
467
Tumor
0.1
278
Normal
0.1
738
Normal
0.1
456
Normal
0.0
432
Normal
0.0
641
Tumor
0.0
394
Normal
0.0
814
Normal
0.0
195
Tumor
0.0
921
Tumor
0.0
148
Normal
0.0
421
Tumor
0.0
162
Normal
0.0
172
Normal
0.0
136
Normal
0.0
135
Tumor
0.0
332
Normal
0.0
343
Tumor
0.0
881
Tumor
0.0
744
Normal
0.0
661
Tumor
0.0
352
Normal
0.0
138
Normal
0.0
221
Tumor
0.0
258
Normal
0.0
481
Tumor
0.0
127
Tumor
0.0
488
Normal
0.0
1013
Tumor
0.0
484
Normal
0.0
435
Tumor
0.0
424
Normal
0.0
331
Tumor
0.0
878
Normal
0.0
267
Tumor
0.0
445
Tumor
0.0
1026
Normal
0.0
956
Normal
0.0
462
Normal
0.0
468
Normal
N/A
341
Tumor
0.0
698
Normal
0.0
185
Tumor
0.0
286
Normal
0.0
472
Normal
0.0
975
Tumor
0.0
493
Tumor
0.0
314
Normal
0.0
874
Normal
0.0
232
Normal
0.0
851
Tumor
0.0
1043
Tumor
0.0
423
Tumor
0.0
568
Normal
0.0
365
Tumor
0.0
444
Normal
0.0
146
Normal
0.0
714
Normal
0.0
171
Tumor
0.0
413
Tumor
0.0
786
Normal
0.0
938
Normal
0.0
464
Normal
0.0
466
Normal
0.0
388
Normal
0.0
662
Normal
0.0
191
Tumor
0.0
416
Normal
0.0
642
Normal
0.0
428
Normal
0.0
944
Normal
0.0
268
Normal
0.0
924
Normal
0.0
494
Normal
0.0
966
Normal
0.0
873
Tumor
0.0
474
Normal
0.0
816
Normal
0.0
917
Tumor
0.0
648
Normal
0.0
778
Normal
0.0
396
Normal
0.0
327
Tumor
0.0
723
Tumor
0.0
737
Tumor
0.0
715
Tumor
0.0
951
Tumor
0.0
957
Tumor
0.0
817
Tumor
-0.1
546
Normal
-0.1
912
Normal
-0.1
518
Normal
-0.1
395
Tumor
-0.1
666
Normal
-0.1
363
Tumor
-0.1
297
Tumor
-0.1
884
Normal
-0.1
943
Tumor
-0.1
477
Tumor
-0.1
528
Normal
-0.1
492
Normal
-0.1
915
Tumor
-0.1
311
Tumor
-0.1
724
Normal
-0.1
696
Normal
-0.1
351
Tumor
-0.1
527
Tumor
-0.1
161
Tumor
-0.1
482
Normal
-0.1
228
Normal
-0.1
574
Normal
-0.1
916
Normal
-0.1
448
Normal
-0.1
671
Tumor
-0.1
866
Normal
-0.1
471
Tumor
-0.1
573
Tumor
-0.1
1028
Normal
-0.1
1022
Normal
-0.1
461
Tumor
-0.1
483
Tumor
-0.1
283
Tumor
-0.1
412
Normal
-0.1
498
Normal
-0.1
361
Tumor
-0.1
523
Tumor
-0.1
534
Normal
-0.1
686
Normal
-0.1
517
Tumor
-0.1
636
Normal
-0.1
356
Normal
-0.1
964
Normal
-0.1
261
Tumor
-0.1
554
Normal
-0.1
141
Tumor
-0.1
861
Tumor
-0.1
918
Normal
-0.1
1016
Normal
-0.1
937
Tumor
-0.1
713
Tumor
-0.1
212
Normal
-0.1
364
Normal
-0.1
926
Normal
-0.1
628
Normal
-0.1
864
Normal
-0.1
868
Normal
-0.1
867
Tumor
-0.1
716
Normal
-0.1
922
Normal
-0.1
981
Tumor
-0.1
391
Tumor
-0.1
882
Normal
-0.1
513
Tumor
-0.1
756
Normal
-0.1
968
Normal
-0.1
824
Normal
-0.1
664
Normal
-0.1
328
Normal
-0.1
857
Tumor
-0.1
815
Tumor
-0.1
1041
Tumor
-0.1
553
Tumor
-0.1
384
Normal
-0.1
722
Normal
-0.1
976
Normal
-0.1
145
Tumor
-0.1
538
Normal
-0.1
383
Tumor
-0.1
223
Tumor
-0.1
227
Tumor
-0.1
913
Tumor
-0.1
564
Normal
-0.2
967
Tumor
-0.2
1044
Normal
-0.2
447
Tumor
-0.2
965
Tumor
-0.2
982
Normal
-0.2
1031
Tumor
-0.2
312
Normal
-0.2
415
Tumor
-0.2
1042
Normal
-0.2
728
Normal
-0.2
647
Tumor
-0.2
858
Normal
-0.2
883
Tumor
-0.2
525
Tumor
-0.2
616
Normal
-0.2
536
Normal
-0.2
755
Tumor
-0.2
142
Normal
-0.2
284
Normal
-0.2
224
Normal
-0.2
545
Tumor
-0.2
665
Tumor
-0.2
1015
Tumor
-0.2
516
Normal
-0.2
558
Normal
-0.2
954
Normal
-0.2
615
Tumor
-0.2
1014
Normal
-0.2
526
Normal
-0.2
563
Tumor
-0.2
1021
Tumor
-0.2
355
Tumor
-0.2
963
Tumor
-0.2
978
Normal
-0.2
478
Normal
-0.2
958
Normal
-0.2
818
Normal
-0.2
514
Normal
-0.2
137
Tumor
-0.2
697
Tumor
-0.2
455
Tumor
-0.2
823
Tumor
-0.2
785
Tumor
-0.2
367
Tumor
-0.2
211
Tumor
-0.2
1032
Normal
-0.2
572
Normal
-0.2
852
Normal
-0.3
721
Tumor
-0.3
443
Tumor
-0.3
727
Tumor
-0.3
925
Tumor
-0.3
983
Tumor
-0.3
953
Tumor
-0.3
672
Normal
-0.3
387
Tumor
-0.3
984
Normal
-0.3
537
Tumor
-0.3
923
Tumor
-0.3
524
Normal
-0.3
1046
Normal
-0.4
1045
Tumor
-0.4
487
Tumor
-0.4
473
Tumor
-0.5
535
Tumor
-0.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.