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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SULT2A1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
271.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1987.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
1458.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1366.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1345.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1295.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1226.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1163.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1150.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
1107.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
1099.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1003.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
962.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
933.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
880.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
862.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
828.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
818.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
761.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
741.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
721.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
718.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
712.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
705.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
701.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
696.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
688.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
674.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
661.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
646.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
639.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
624.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
612.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
608.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
603.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
595.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
587.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
585.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
583.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
576.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
575.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
574.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
565.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
565.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
555.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
553.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
535.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
533.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
527.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
524.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
521.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
520.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
519.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
510.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
509.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
509.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
488.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
486.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
470.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
469.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
462.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
452.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
451.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
446.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
441.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
440.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
436.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
434.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
432.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
430.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
424.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
423.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
422.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
416.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
414.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
402.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
394.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
390.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
387.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
387.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
384.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
383.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
383.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
379.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
376.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
375.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
372.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
371.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
360.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
358.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
358.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
355.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
355.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
355.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
353.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
350.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
350.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
347.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
347.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
341.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
341.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
341.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
340.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
339.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
334.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
333.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
332.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
330.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
328.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
326.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
325.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
324.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
322.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
319.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
319.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
318.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
317.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
317.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
316.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
316.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
315.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
314.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
313.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
311.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
310.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
302.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
301.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
301.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
300.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
299.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
299.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
299.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
298.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
293.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
292.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
289.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
286.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
285.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
285.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
284.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
276.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
275.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
274.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
263.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
262.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
258.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
257.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
257.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
257.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
256.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
252.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
250.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
249.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
249.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
246.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
246.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
244.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
243.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
238.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
237.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
236.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
236.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
234.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
231.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
231.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
230.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
228.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
225.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
225.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
224.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
223.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
223.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
220.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
219.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
217.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
217.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
211.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
209.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
206.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
206.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
205.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
205.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
202.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
202.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
199.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
197.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
195.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
189.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
189.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
187.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
184.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
181.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
180.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
179.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
178.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
176.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
175.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
174.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
172.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
171.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
171.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
171.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
168.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
167.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
166.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
163.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
162.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
159.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
159.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
158.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
156.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
156.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
155.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
154.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
152.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
152.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
151.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
150.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
146.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
145.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
145.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
145.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
144.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
143.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
143.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
139.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
136.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
134.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
134.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
132.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
132.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
131.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
130.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
128.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
128.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
128.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
128.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
126.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
123.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
123.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
122.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
122.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
121.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
121.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
118.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
118.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
117.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
115.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
113.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
111.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
111.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
108.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
104.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
103.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
103.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
103.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
102.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
101.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
101.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
98.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
97.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
97.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
96.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
95.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
95.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
94.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
93.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
90.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
90.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
90.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
88.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
87.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
87.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
86.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
84.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
82.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
82.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
80.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
80.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
79.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
79.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
78.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
77.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
76.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
75.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
75.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
74.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
73.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
71.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
70.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
64.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
63.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
57.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
55.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
52.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
50.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
48.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
48.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
48.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
47.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
47.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
47.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
47.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
46.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
46.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
45.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
45.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
40.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
39.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
39.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
36.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
35.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
31.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
30.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
30.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
30.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
28.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
27.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
27.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
27.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
20.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
19.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
17.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
16.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
15.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
15.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
13.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
13.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
10.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
9.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
7.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
6.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
6.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
6.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
5.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
5.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
5.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
4.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
4.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
4.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
3.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
3.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
2.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
0.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
0.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
0.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
0.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
0.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
0.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SULT2A1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
308.8
Number of samples
231
Samples
Sample
Description
TPM
DO45131
0 years, male, NA, stage:4, dead, 360 days
1885.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
1577.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
1294.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
1169.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
1115.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
1059.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
1048.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
1042.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1035.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
971.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
901.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
851.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
839.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
831.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
821.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
792.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
783.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
775.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
736.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
726.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
711.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
700.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
693.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
678.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
655.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
653.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
650.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
639.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
638.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
636.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
630.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
624.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
615.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
606.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
600.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
595.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
592.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
590.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
582.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
578.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
577.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
576.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
567.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
556.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
547.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
545.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
537.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
525.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
525.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
520.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
515.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
513.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
509.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
504.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
502.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
474.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
459.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
458.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
449.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
447.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
439.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
429.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
425.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
421.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
414.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
407.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
405.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
397.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
397.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
392.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
390.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
389.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
385.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
371.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
369.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
368.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
361.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
358.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
357.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
344.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
336.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
331.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
330.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
327.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
323.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
322.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
321.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
314.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
311.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
306.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
306.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
300.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
297.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
294.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
290.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
287.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
287.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
283.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
275.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
274.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
271.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
271.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
269.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
265.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
265.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
260.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
258.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
258.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
255.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
253.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
242.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
236.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
231.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
231.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
227.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
224.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
223.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
220.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
219.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
218.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
214.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
211.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
208.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
207.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
207.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
206.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
205.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
203.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
202.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
200.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
195.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
191.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
188.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
183.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
180.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
175.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
175.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
173.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
172.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
171.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
168.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
167.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
167.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
162.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
160.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
158.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
153.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
152.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
151.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
150.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
146.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
138.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
132.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
131.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
128.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
128.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
120.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
120.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
117.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
117.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
112.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
107.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
105.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
100.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
96.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
94.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
92.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
88.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
85.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
85.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
81.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
79.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
77.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
75.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
71.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
70.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
66.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
66.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
65.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
61.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
59.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
54.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
54.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
53.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
50.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
40.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
36.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
34.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
34.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
34.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
33.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
31.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
31.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
29.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
28.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
25.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
24.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
20.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
20.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
16.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
13.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
13.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
10.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
9.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
7.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
7.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
5.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
4.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
4.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
4.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
3.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
2.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
2.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
1.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
1.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
1.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
0.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
0.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
0.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
0.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
0.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
0.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
0.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
0.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
0.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
0.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
0.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
0.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
0.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
147
Tumor
1.4
1027
Tumor
1.2
922
Normal
1.0
452
Normal
1.0
435
Tumor
1.0
448
Normal
0.9
466
Normal
0.9
745
Tumor
0.9
944
Normal
0.9
851
Tumor
0.9
171
Tumor
0.9
616
Normal
0.9
494
Normal
0.8
915
Tumor
0.8
546
Normal
0.8
368
Normal
0.8
864
Normal
0.8
636
Normal
0.8
341
Tumor
0.7
982
Normal
0.7
286
Normal
0.7
124
Normal
0.7
358
Normal
0.7
618
Normal
0.7
128
Normal
0.7
228
Normal
0.7
698
Normal
0.7
686
Normal
0.7
446
Normal
0.7
696
Normal
0.7
376
Normal
0.7
964
Normal
0.7
568
Normal
0.7
914
Normal
0.7
332
Normal
0.7
918
Normal
0.7
516
Normal
0.7
462
Normal
0.6
186
Normal
0.6
716
Normal
0.6
172
Normal
0.6
222
Normal
0.6
514
Normal
0.6
756
Normal
0.6
392
Normal
0.6
354
Normal
0.6
1016
Normal
0.6
558
Normal
0.6
966
Normal
0.6
414
Normal
0.6
852
Normal
0.6
824
Normal
0.6
723
Tumor
0.6
126
Normal
0.6
722
Normal
0.6
868
Normal
0.6
862
Normal
0.6
468
Normal
0.5
258
Normal
0.5
412
Normal
0.5
212
Normal
0.5
272
Normal
0.5
1028
Normal
0.5
123
Tumor
0.5
976
Normal
0.5
356
Normal
0.5
362
Normal
0.5
394
Normal
0.5
662
Normal
0.5
564
Normal
0.5
746
Normal
0.5
232
Normal
0.5
816
Normal
0.5
231
Tumor
0.5
628
Normal
0.5
858
Normal
0.5
714
Normal
0.5
916
Normal
0.5
981
Tumor
0.5
1044
Normal
0.5
422
Normal
0.5
284
Normal
0.5
257
Tumor
0.5
978
Normal
0.5
866
Normal
0.5
416
Normal
0.4
567
Tumor
0.4
528
Normal
0.4
924
Normal
0.4
426
Normal
0.4
958
Normal
0.4
484
Normal
0.4
1022
Normal
0.4
984
Normal
0.4
298
Normal
0.4
352
Normal
0.4
1042
Normal
0.4
162
Normal
0.4
1026
Normal
0.4
666
Normal
0.4
642
Normal
0.4
432
Normal
0.4
912
Normal
0.4
488
Normal
0.4
138
Normal
0.4
436
Normal
0.4
956
Normal
0.4
926
Normal
0.4
474
Normal
0.4
1032
Normal
0.3
314
Normal
0.3
112
Tumor
0.3
111
Normal
0.3
262
Normal
0.3
786
Normal
0.3
388
Normal
0.3
434
Normal
0.3
342
Normal
0.3
1046
Normal
0.3
867
Tumor
0.3
738
Normal
0.3
954
Normal
0.3
742
Normal
0.3
396
Normal
0.3
534
Normal
0.3
968
Normal
0.3
554
Normal
0.3
574
Normal
0.3
386
Normal
0.3
328
Normal
0.3
1014
Normal
0.3
218
Normal
0.3
648
Normal
0.3
518
Normal
0.3
132
Normal
0.3
393
Tumor
0.3
938
Normal
0.3
366
Normal
0.3
952
Normal
0.2
526
Normal
0.2
664
Normal
0.2
882
Normal
0.2
344
Normal
0.2
755
Tumor
0.2
142
Normal
0.2
214
Normal
0.2
456
Normal
0.2
114
Normal
0.2
278
Normal
0.2
127
Tumor
0.2
224
Normal
0.2
538
Normal
0.1
818
Normal
0.1
492
Normal
0.1
884
Normal
0.1
146
Normal
0.1
196
Normal
0.1
472
Normal
0.1
327
Tumor
0.1
353
Tumor
0.1
911
Tumor
0.1
312
Normal
0.0
148
Normal
0.0
481
Tumor
0.0
433
Tumor
0.0
953
Tumor
0.0
464
Normal
0.0
672
Normal
0.0
744
Normal
0.0
977
Tumor
0.0
424
Normal
0.0
136
Normal
0.0
955
Tumor
0.0
1045
Tumor
0.0
268
Normal
0.0
572
Normal
0.0
778
Normal
-0.1
482
Normal
-0.1
557
Tumor
-0.1
364
Normal
-0.1
524
Normal
-0.1
363
Tumor
-0.1
461
Tumor
-0.1
451
Tumor
-0.2
141
Tumor
-0.2
125
Tumor
-0.2
188
Normal
-0.2
444
Normal
-0.2
1015
Tumor
-0.2
428
Normal
-0.2
685
Tumor
-0.2
863
Tumor
-0.2
145
Tumor
-0.2
715
Tumor
-0.2
161
Tumor
-0.3
195
Tumor
-0.3
465
Tumor
-0.3
113
Tumor
-0.3
313
Tumor
-0.3
957
Tumor
-0.3
728
Normal
-0.3
663
Tumor
-0.3
513
Tumor
-0.3
857
Tumor
-0.3
878
Normal
-0.3
536
Normal
-0.3
192
Normal
-0.3
384
Normal
-0.3
423
Tumor
-0.4
665
Tumor
-0.4
921
Tumor
-0.4
913
Tumor
-0.4
267
Tumor
-0.4
217
Tumor
-0.4
873
Tumor
-0.4
261
Tumor
-0.4
627
Tumor
-0.4
537
Tumor
-0.4
365
Tumor
-0.4
963
Tumor
-0.4
727
Tumor
-0.4
478
Normal
-0.4
777
Tumor
-0.5
415
Tumor
-0.5
641
Tumor
-0.5
1041
Tumor
-0.5
515
Tumor
-0.5
277
Tumor
-0.5
861
Tumor
-0.6
647
Tumor
-0.6
473
Tumor
-0.6
1013
Tumor
-0.6
553
Tumor
-0.6
874
Normal
-0.6
498
Normal
-0.6
721
Tumor
-0.6
357
Tumor
-0.6
411
Tumor
-0.6
421
Tumor
-0.6
187
Tumor
-0.7
1043
Tumor
-0.7
185
Tumor
-0.7
391
Tumor
-0.7
447
Tumor
-0.7
483
Tumor
-0.8
814
Normal
-0.8
431
Tumor
-0.8
493
Tumor
-0.8
221
Tumor
-0.8
1021
Tumor
-0.8
213
Tumor
-0.9
741
Tumor
-0.9
525
Tumor
-0.9
615
Tumor
-0.9
617
Tumor
-0.9
635
Tumor
-0.9
737
Tumor
-0.9
563
Tumor
-0.9
975
Tumor
-0.9
445
Tumor
-0.9
823
Tumor
-0.9
491
Tumor
-0.9
191
Tumor
-0.9
361
Tumor
-0.9
724
Normal
-1.0
463
Tumor
-1.0
943
Tumor
-1.0
865
Tumor
-1.0
375
Tumor
-1.0
881
Tumor
-1.0
883
Tumor
-1.1
1031
Tumor
-1.1
965
Tumor
-1.1
785
Tumor
-1.1
271
Tumor
-1.1
467
Tumor
-1.2
137
Tumor
-1.2
227
Tumor
-1.2
917
Tumor
-1.3
413
Tumor
-1.3
813
Tumor
-1.3
533
Tumor
-1.3
517
Tumor
-1.3
817
Tumor
-1.3
487
Tumor
-1.3
355
Tumor
-1.4
425
Tumor
-1.4
297
Tumor
-1.4
477
Tumor
-1.4
571
Tumor
-1.5
427
Tumor
-1.5
695
Tumor
-1.6
523
Tumor
-1.6
937
Tumor
-1.6
697
Tumor
-1.7
283
Tumor
-1.7
383
Tumor
-1.7
343
Tumor
-1.8
471
Tumor
-1.8
923
Tumor
-1.8
395
Tumor
-1.8
951
Tumor
-1.9
331
Tumor
-1.9
223
Tumor
-1.9
1025
Tumor
-1.9
573
Tumor
-2.0
671
Tumor
-2.0
877
Tumor
-2.0
443
Tumor
-2.0
311
Tumor
-2.0
713
Tumor
-2.0
387
Tumor
-2.1
455
Tumor
-2.1
967
Tumor
-2.1
135
Tumor
-2.1
983
Tumor
-2.1
527
Tumor
-2.2
367
Tumor
-2.2
925
Tumor
-2.2
815
Tumor
-2.3
351
Tumor
-2.3
545
Tumor
-2.4
285
Tumor
-2.5
211
Tumor
-2.5
385
Tumor
-2.6
661
Tumor
-2.6
497
Tumor
-2.6
131
Tumor
-2.8
535
Tumor
-2.9
743
Tumor
-3.2
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.