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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OLFM2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
364.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
262.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
256.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
247.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
246.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
239.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
226.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
218.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
218.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
217.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
215.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
213.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
196.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
181.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
179.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
155.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
150.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
143.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
141.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
137.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
135.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
133.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
127.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
123.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
119.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
117.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
113.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
113.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
111.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
111.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
110.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
110.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
110.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
110.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
109.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
106.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
104.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
103.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
103.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
102.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
102.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
99.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
98.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
98.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
97.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
95.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
95.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
93.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
92.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
91.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
91.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
88.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
87.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
84.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
82.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
81.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
80.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
79.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
78.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
77.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
77.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
76.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
75.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
74.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
74.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
73.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
73.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
72.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
72.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
71.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
71.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
71.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
70.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
70.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
67.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
67.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
66.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
66.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
66.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
65.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
64.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
64.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
64.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
62.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
60.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
60.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
60.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
60.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
59.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
59.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
59.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
58.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
58.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
57.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
57.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
57.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
56.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
56.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
56.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
55.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
54.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
54.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
54.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
53.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
52.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
52.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
51.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
51.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
51.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
51.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
51.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
50.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
49.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
49.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
49.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
49.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
49.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
48.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
48.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
48.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
48.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
48.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
48.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
48.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
47.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
47.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
47.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
47.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
47.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
47.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
46.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
46.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
46.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
46.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
45.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
45.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
44.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
44.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
44.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
44.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
43.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
42.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
41.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
41.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
40.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
40.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
40.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
39.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
39.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
39.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
39.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
38.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
38.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
38.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
37.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
36.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
36.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
36.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
35.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
35.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
35.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
35.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
34.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
34.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
33.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
33.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
33.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
33.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
33.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
33.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
32.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
32.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
32.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
32.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
31.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
31.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
31.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
31.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
31.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
30.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
30.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
29.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
29.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
29.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
29.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
29.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
29.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
29.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
29.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
28.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
28.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
28.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
28.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
27.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
27.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
27.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
27.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
27.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
27.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
27.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
27.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
26.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
26.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
26.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
26.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
26.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
26.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
26.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
25.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
25.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
25.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
25.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
24.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
24.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
24.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
24.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
24.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
24.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
23.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
23.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
23.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
23.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
23.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
23.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
23.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
23.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
23.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
22.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
22.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
22.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
21.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
21.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
21.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
21.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
21.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
20.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
20.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
19.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
19.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
19.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
19.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
19.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
18.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
18.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
18.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
18.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
18.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
18.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
17.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
17.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
17.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
17.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
17.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
17.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
17.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
17.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
17.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
17.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
16.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
16.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
16.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
16.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
16.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
16.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
16.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
16.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
15.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
15.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
15.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
15.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
15.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
15.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
15.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
15.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
15.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
15.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
15.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
14.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
14.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
14.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
14.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
14.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
14.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
13.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
13.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
13.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
13.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
13.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
12.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
12.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
12.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
12.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
12.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
12.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
12.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
12.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
12.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
12.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
12.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
11.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
11.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
11.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
10.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
10.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
10.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
9.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
9.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
9.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
9.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
8.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
8.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
8.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
8.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
8.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
8.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
8.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
8.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
8.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
8.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
8.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
7.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
7.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
7.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
6.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
6.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
6.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
6.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
6.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
6.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
5.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
5.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
5.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
4.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
4.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
4.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
4.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
3.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
3.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
3.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
3.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
3.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
3.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
1.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
1.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
1.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
1.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OLFM2 is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.1
Number of samples
231
Samples
Sample
Description
TPM
DO45125
0 years, male, NA, stage:3, alive, 1680 days
282.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
222.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
218.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
181.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
173.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
147.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
120.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
114.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
105.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
103.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
97.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
92.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
90.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
83.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
82.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
80.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
75.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
72.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
69.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
66.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
66.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
64.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
64.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
64.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
63.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
62.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
62.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
62.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
59.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
57.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
56.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
54.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
54.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
54.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
52.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
51.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
50.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
49.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
47.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
46.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
45.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
44.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
43.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
43.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
43.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
42.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
42.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
42.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
42.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
41.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
41.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
41.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
41.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
39.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
39.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
38.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
38.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
37.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
36.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
36.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
36.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
36.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
35.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
35.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
34.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
34.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
34.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
33.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
33.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
33.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
33.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
33.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
32.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
32.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
32.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
32.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
31.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
30.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
30.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
30.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
30.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
30.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
29.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
29.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
29.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
29.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
29.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
28.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
28.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
27.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
27.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
27.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
27.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
26.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
26.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
26.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
26.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
26.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
26.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
26.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
25.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
25.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
25.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
25.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
25.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
24.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
24.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
24.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
24.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
23.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
23.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
23.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
23.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
22.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
22.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
22.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
21.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
21.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
20.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
20.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
20.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
20.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
20.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
19.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
19.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
18.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
17.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
16.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
16.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
16.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
16.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
16.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
16.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
16.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
16.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
16.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
16.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
16.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
16.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
15.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
15.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
15.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
15.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
14.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
14.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
14.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
14.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
14.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
14.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
14.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
14.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
13.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
13.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
13.6
DO50845
0 years, male, NA, stage:3, alive, 210 days
13.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
13.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
13.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
13.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
12.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
12.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
11.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
11.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
11.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
11.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
10.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
10.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
10.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
10.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
10.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
10.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
10.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
10.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
9.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
9.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
9.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
9.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
9.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
9.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
8.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
8.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
8.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
8.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
8.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
7.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
7.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
7.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
7.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
6.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
6.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
6.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
6.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
6.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
6.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
6.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
6.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
5.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
5.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
5.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
5.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
5.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
4.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
4.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
4.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
4.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
4.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
4.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
4.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
4.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
3.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
3.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
3.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
3.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
3.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
3.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
2.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
2.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
2.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
2.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
2.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
1.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
1.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
1.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
0.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
0.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
0.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
0.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
0.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
0.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
455
Tumor
1.9
815
Tumor
1.9
128
Normal
1.7
545
Tumor
1.5
983
Tumor
1.4
955
Tumor
1.4
864
Normal
1.3
477
Tumor
1.2
866
Normal
1.2
862
Normal
1.2
388
Normal
1.2
461
Tumor
1.1
863
Tumor
1.1
857
Tumor
1.1
445
Tumor
1.0
393
Tumor
1.0
394
Normal
1.0
527
Tumor
1.0
913
Tumor
0.9
443
Tumor
0.9
392
Normal
0.8
114
Normal
0.8
396
Normal
0.7
481
Tumor
0.7
391
Tumor
0.7
466
Normal
0.7
462
Normal
0.7
877
Tumor
0.7
471
Tumor
0.7
375
Tumor
0.7
447
Tumor
0.7
367
Tumor
0.6
528
Normal
0.6
868
Normal
0.6
473
Tumor
0.6
444
Normal
0.5
858
Normal
0.5
433
Tumor
0.5
914
Normal
0.5
111
Normal
0.5
952
Normal
0.5
956
Normal
0.4
446
Normal
0.4
911
Tumor
0.4
468
Normal
0.4
852
Normal
0.4
478
Normal
0.3
884
Normal
0.3
386
Normal
0.3
366
Normal
0.3
878
Normal
0.3
126
Normal
0.3
395
Tumor
0.3
818
Normal
0.3
432
Normal
0.2
368
Normal
0.2
816
Normal
0.2
824
Normal
0.2
1045
Tumor
0.2
362
Normal
0.1
365
Tumor
0.1
431
Tumor
0.1
1016
Normal
0.1
376
Normal
0.1
464
Normal
0.1
467
Tumor
0.1
456
Normal
0.1
534
Normal
0.1
385
Tumor
0.1
882
Normal
0.1
384
Normal
0.1
436
Normal
0.0
387
Tumor
0.0
535
Tumor
0.0
873
Tumor
0.0
865
Tumor
0.0
881
Tumor
0.0
533
Tumor
0.0
874
Normal
0.0
953
Tumor
0.0
851
Tumor
0.0
883
Tumor
0.0
474
Normal
0.0
912
Normal
-0.1
361
Tumor
-0.1
538
Normal
-0.1
465
Tumor
-0.1
124
Normal
-0.1
452
Normal
-0.1
938
Normal
-0.1
1046
Normal
-0.1
546
Normal
-0.2
435
Tumor
-0.2
434
Normal
-0.2
954
Normal
-0.2
978
Normal
-0.2
383
Tumor
-0.2
472
Normal
-0.3
482
Normal
-0.3
982
Normal
-0.3
697
Tumor
-0.3
553
Tumor
-0.3
977
Tumor
-0.3
823
Tumor
-0.3
944
Normal
-0.3
1044
Normal
-0.4
463
Tumor
-0.4
554
Normal
-0.4
981
Tumor
-0.4
937
Tumor
-0.4
1014
Normal
-0.4
698
Normal
-0.4
451
Tumor
-0.4
867
Tumor
-0.4
984
Normal
-0.5
1015
Tumor
-0.5
112
Tumor
-0.5
1043
Tumor
-0.6
951
Tumor
-0.6
125
Tumor
-0.7
448
Normal
-0.7
861
Tumor
-0.7
536
Normal
-0.8
943
Tumor
-0.8
113
Tumor
-0.9
127
Tumor
-1.0
817
Tumor
-1.1
537
Tumor
-1.1
1013
Tumor
-1.6
123
Tumor
-1.8
351
Tumor
N/A
231
Tumor
N/A
352
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
354
Normal
N/A
355
Tumor
N/A
356
Normal
N/A
357
Tumor
N/A
358
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
487
Tumor
N/A
488
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
142
Normal
N/A
145
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
271
Tumor
N/A
272
Normal
N/A
277
Tumor
N/A
278
Normal
N/A
713
Tumor
N/A
714
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
615
Tumor
N/A
616
Normal
N/A
737
Tumor
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
741
Tumor
N/A
742
Normal
N/A
743
Tumor
N/A
744
Normal
N/A
745
Tumor
N/A
746
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
515
Tumor
N/A
636
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
641
Tumor
N/A
642
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
648
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
413
Tumor
N/A
414
Normal
N/A
777
Tumor
N/A
415
Tumor
N/A
778
Normal
N/A
416
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
666
Normal
N/A
425
Tumor
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
311
Tumor
N/A
312
Normal
N/A
313
Tumor
N/A
314
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
686
Normal
N/A
567
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
328
Normal
N/A
571
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
214
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
341
Tumor
N/A
221
Tumor
N/A
342
Normal
N/A
222
Normal
N/A
343
Tumor
N/A
223
Tumor
N/A
344
Normal
N/A
224
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
