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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
85.1
nTPM
HPA Brain:
108.3
nTPM
GTEx:
85.1
nTPM
FANTOM5:
110.6
Scaled Tags Per Million
Pig:
82.7
nTPM
Mouse:
73.8
nTPM
Allen mouse:
0.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
108.3
Sample id
Sample description
nTPM
Amygdala nTPM: 106.0
1987
Female, age 91, left hemisphere
124.4
2517
Female, age 94, left hemisphere
117.0
2514
Male, age 75, right hemisphere
104.6
2814
Male, age 76, right hemisphere
94.9
2695
Female, age 67, right hemisphere
89.3
Basal amygdala nTPM: 97.9
2609
Male, age 75, right hemisphere
112.7
2685
Female, age 94, left hemisphere
103.5
1955
Male, age 76, both hemispheres
102.2
2110
Male, age 80, left hemisphere
101.0
2243
Female, age 91, right hemisphere
91.5
2827
Female, age 67, right hemisphere
76.1
Central amygdala nTPM: 108.3
2826
Female, age 94, left hemisphere
119.2
2515
Male, age 75, right hemisphere
117.0
1905
Male, age 76, both hemispheres
105.7
2239
Male, age 80, left hemisphere
105.4
2701
Female, age 91, right hemisphere
94.4
Corticomedial amygdala nTPM: 92.3
2428
Male, age 75, right hemisphere
102.1
2535
Female, age 67, right hemisphere
96.2
2829
Male, age 80, left hemisphere
96.1
2242
Female, age 91, right hemisphere
94.3
2429
Female, age 94, left hemisphere
93.1
2240
Male, age 76, both hemispheres
71.9
Lateral amygdala nTPM: 102.0
2534
Female, age 94, left hemisphere
124.4
2256
Male, age 80, left hemisphere
108.1
2516
Male, age 75, right hemisphere
106.0
2255
Female, age 91, right hemisphere
103.7
1883
Male, age 76, both hemispheres
103.0
2830
Female, age 67, right hemisphere
66.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
85.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 85.1
Samples: 152
Max nTPM: 158.8
Min nTPM: 33.6
Std nTPM: 21.4
Median nTPM: 83.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
158.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
157.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
154.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
139.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
134.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
131.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
124.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
120.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
119.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
118.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
116.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
115.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
114.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
114.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
113.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
111.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
111.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
111.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
109.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
108.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
107.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
106.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
104.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
103.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
103.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
102.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
102.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
100.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
99.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
99.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
99.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
98.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
98.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
98.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
98.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
97.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
96.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
96.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
95.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
95.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
94.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
94.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
93.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
93.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
93.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
93.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
93.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
92.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
92.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
92.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
91.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
91.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
91.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
91.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
90.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
90.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
90.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
89.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
88.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
87.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
87.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
86.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
86.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
85.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
85.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
85.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
85.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
85.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
84.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
84.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
84.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
84.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
84.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
84.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
84.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
83.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
83.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
83.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
82.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
82.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
82.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
81.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
81.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
81.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
81.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
81.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
81.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
79.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
79.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
78.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
78.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
78.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
78.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
77.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
77.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
77.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
76.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
75.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
75.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
75.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
74.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
74.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
74.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
74.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
74.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
74.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
74.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
73.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
73.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
73.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
72.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
72.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
72.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
71.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
70.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
70.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
70.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
70.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
69.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
69.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
68.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
67.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
67.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
66.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
66.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
65.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
65.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
64.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
64.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
64.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
63.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
62.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
62.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
62.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
62.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
61.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
61.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
61.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
60.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
60.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
60.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
59.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
59.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
57.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
55.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
51.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
50.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
50.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
49.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
44.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
35.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
33.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
73.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 73.9
Samples: 4
Max nTPM: 80.7
Min nTPM: 71.3
Sample A
Male
80.7
Sample B
Male
71.3
Sample C
Female
71.7
Sample D
Female
71.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.