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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RELB is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
122.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
95.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
73.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
64.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
49.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
45.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
44.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
44.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
42.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
41.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
41.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
41.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
41.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
40.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
39.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
38.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
37.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
37.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
36.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
36.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
35.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
34.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
33.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
33.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
33.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
33.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
32.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
32.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
32.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
32.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
31.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
31.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
31.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
30.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
30.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
29.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
29.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
28.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
28.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
27.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
27.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
27.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
26.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
26.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
26.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
25.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
25.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
25.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
25.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
25.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
24.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
24.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
24.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
24.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
24.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
24.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
23.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
23.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
23.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
23.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
23.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
23.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
23.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
23.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
23.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
23.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
22.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
22.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
22.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
22.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
22.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
22.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
22.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
22.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
21.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
21.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
21.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
21.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
21.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
21.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
20.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
20.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
20.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
20.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
20.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
20.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
20.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
20.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
20.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
20.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
20.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
20.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
20.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
19.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
19.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
19.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
19.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
19.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
19.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
19.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
18.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
18.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
18.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
18.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
18.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
18.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
18.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
18.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
18.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
18.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
18.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
18.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
18.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
18.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
18.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
18.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
17.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
17.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
17.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
17.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
17.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
17.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
17.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
17.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
17.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
17.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
17.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
17.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
17.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
17.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
16.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
16.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
16.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
16.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
16.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
16.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
16.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
16.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
16.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
16.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
16.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
16.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
16.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
16.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
16.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
15.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
15.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
15.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
15.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
15.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
15.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
15.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
15.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
15.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
15.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
15.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
15.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
15.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
14.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
14.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
14.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
14.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
14.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
14.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
14.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
14.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
14.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
14.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
14.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
13.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
13.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
13.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
13.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
13.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
13.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
13.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
13.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
13.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
13.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
13.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
13.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
13.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
13.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
12.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
12.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
12.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
12.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
12.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
12.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
12.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
12.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
12.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
12.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
12.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
12.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
12.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
12.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
12.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
11.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
11.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
11.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
11.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
11.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
11.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
11.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
11.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
11.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
11.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
11.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
11.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
11.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
11.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
10.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
10.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
10.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
10.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
10.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
10.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
10.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
10.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
10.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
10.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
10.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
10.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
10.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
10.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
10.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
9.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
9.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
9.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
9.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
9.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
9.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
9.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
9.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
9.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
9.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
9.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
9.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
9.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
9.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
8.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
8.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
8.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
8.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
8.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
8.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
8.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
8.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
8.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
8.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
8.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
8.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
8.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
8.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
8.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
8.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
7.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
7.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
7.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
7.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
7.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
7.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
7.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
7.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
7.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
7.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
7.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
7.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
7.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
7.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
7.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
7.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
6.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
6.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
6.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
6.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
6.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
6.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
6.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
6.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
6.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
6.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
6.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
6.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
6.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
6.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
6.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
6.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
6.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
6.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
5.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
5.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
5.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
5.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
5.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
5.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
5.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
5.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
5.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
5.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
5.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
5.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
5.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
5.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
5.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
5.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
5.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
5.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
5.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
4.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
4.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
4.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
4.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
4.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
4.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
4.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
4.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
4.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
3.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
3.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
3.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
3.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
3.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
3.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
3.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
3.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
3.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
3.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
3.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
3.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
3.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
3.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
3.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
2.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
2.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
2.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
2.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
1.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
1.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RELB is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.0
Number of samples
231
Samples
Sample
Description
TPM
DO45277
0 years, male, NA, stage:3, alive, 600 days
39.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
38.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
35.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
28.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
28.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
27.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
26.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
26.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
26.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
25.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
24.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
23.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
22.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
22.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
21.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
21.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
21.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
21.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
20.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
20.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
19.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
19.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
19.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
18.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
18.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
18.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
18.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
17.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
17.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
17.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
17.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
16.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
16.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
16.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
16.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
16.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
16.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
16.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
16.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
15.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
15.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
15.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
15.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
15.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
15.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
14.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
14.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
14.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
14.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
14.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
14.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
14.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
13.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
13.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
13.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
13.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
13.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
13.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
13.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
13.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
13.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
12.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
12.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
12.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
12.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
12.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
12.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
11.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
11.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
11.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
11.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
11.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
11.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
11.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
11.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
11.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
11.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
11.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
10.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
10.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
10.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
10.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
10.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
10.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
10.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
10.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
10.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
9.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
9.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
9.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
9.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
9.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
9.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
9.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
9.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
9.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
9.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
9.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
9.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
9.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
9.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
9.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
9.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
9.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
9.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
9.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
9.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
8.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
8.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
8.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
8.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
8.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
8.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
8.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
8.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
8.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
8.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
8.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
8.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
8.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
8.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
8.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
8.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
8.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
8.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
8.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
8.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
7.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
7.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
7.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
7.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
7.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
7.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
7.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
7.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
7.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
7.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
7.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
7.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
7.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
7.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
7.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
7.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
7.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
6.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
6.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
6.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
6.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
6.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
6.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
6.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
6.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
6.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
6.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
6.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
6.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
6.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
6.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
5.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
5.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
5.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
5.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
5.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
5.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
5.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
5.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
5.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
5.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
5.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
5.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
5.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
5.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
5.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
5.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
5.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
5.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
5.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
4.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
4.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
4.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
4.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
4.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
4.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
4.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
4.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
4.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
4.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
4.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
4.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
4.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
3.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
3.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
3.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
3.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
3.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
3.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
3.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
3.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
3.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
3.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
3.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
3.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
3.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
3.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
3.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
3.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
3.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
2.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
2.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
2.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
2.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
2.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
2.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
2.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
2.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
2.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
2.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
1.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
1.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
1.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
1.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
0.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
211
Tumor
1.6
463
Tumor
1.2
921
Tumor
1.1
661
Tumor
1.1
213
Tumor
1.1
573
Tumor
0.9
425
Tumor
0.9
917
Tumor
0.8
123
Tumor
0.8
471
Tumor
0.8
221
Tumor
0.8
455
Tumor
0.7
523
Tumor
0.7
413
Tumor
0.7
354
Normal
0.7
1021
Tumor
0.7
428
Normal
0.7
147
Tumor
0.7
533
Tumor
0.7
353
Tumor
0.6
351
Tumor
0.6
477
Tumor
0.6
217
Tumor
0.6
525
Tumor
0.6
1031
Tumor
0.6
421
Tumor
0.6
567
Tumor
0.6
427
Tumor
0.6
925
Tumor
0.5
881
Tumor
0.5
524
Normal
0.5
343
Tumor
0.5
426
Normal
0.5
277
Tumor
0.5
697
Tumor
0.4
861
Tumor
0.4
358
Normal
0.4
755
Tumor
0.4
191
Tumor
0.4
431
Tumor
0.4
271
Tumor
0.4
383
Tumor
0.4
713
Tumor
0.4
745
Tumor
0.4
493
Tumor
0.4
923
Tumor
0.4
563
Tumor
0.4
465
Tumor
0.4
975
Tumor
0.4
647
Tumor
0.4
451
Tumor
0.4
443
Tumor
0.4
422
Normal
0.4
361
Tumor
0.4
1025
Tumor
0.4
536
Normal
0.4
352
Normal
0.3
951
Tumor
0.3
311
Tumor
0.3
187
Tumor
0.3
297
Tumor
0.3
231
Tumor
0.3
916
Normal
0.3
557
Tumor
0.3
131
Tumor
0.3
375
Tumor
0.3
188
Normal
0.3
444
Normal
0.3
467
Tumor
0.3
145
Tumor
0.3
414
Normal
0.3
424
Normal
0.3
327
Tumor
0.3
721
Tumor
0.3
447
Tumor
0.3
967
Tumor
0.3
395
Tumor
0.3
545
Tumor
0.3
943
Tumor
0.3
617
Tumor
0.3
344
Normal
0.3
461
Tumor
0.3
913
Tumor
0.3
1043
Tumor
0.3
937
Tumor
0.3
777
Tumor
0.3
963
Tumor
0.3
195
Tumor
0.2
434
Normal
0.2
785
Tumor
0.2
411
Tumor
0.2
641
Tumor
0.2
478
Normal
0.2
161
Tumor
0.2
137
Tumor
0.2
867
Tumor
0.2
342
Normal
0.2
814
Normal
0.2
954
Normal
0.2
815
Tumor
0.2
341
Tumor
0.2
956
Normal
0.2
192
Normal
0.2
365
Tumor
0.1
497
Tumor
0.1
262
Normal
0.1
384
Normal
0.1
537
Tumor
0.1
535
Tumor
0.1
635
Tumor
0.1
966
Normal
0.1
185
Tumor
0.1
387
Tumor
0.1
432
Normal
0.1
141
Tumor
0.1
957
Tumor
0.1
113
Tumor
0.1
366
Normal
0.1
868
Normal
0.1
513
Tumor
0.1
723
Tumor
0.1
393
Tumor
0.1
728
Normal
0.1
553
Tumor
0.1
873
Tumor
0.1
268
Normal
0.1
223
Tumor
0.1
874
Normal
0.1
331
Tumor
0.1
527
Tumor
0.1
445
Tumor
0.1
391
Tumor
0.1
665
Tumor
0.1
851
Tumor
0.1
742
Normal
0.1
517
Tumor
0.0
446
Normal
0.0
283
Tumor
0.0
135
Tumor
0.0
944
Normal
0.0
385
Tumor
0.0
698
Normal
0.0
938
Normal
0.0
498
Normal
0.0
435
Tumor
0.0
492
Normal
0.0
482
Normal
0.0
423
Tumor
0.0
464
Normal
0.0
738
Normal
0.0
148
Normal
0.0
616
Normal
0.0
858
Normal
0.0
124
Normal
0.0
1044
Normal
0.0
355
Tumor
0.0
367
Tumor
0.0
286
Normal
0.0
433
Tumor
0.0
1045
Tumor
0.0
865
Tumor
0.0
663
Tumor
0.0
285
Tumor
0.0
224
Normal
0.0
114
Normal
0.0
362
Normal
0.0
126
Normal
-0.1
415
Tumor
-0.1
953
Tumor
-0.1
515
Tumor
-0.1
483
Tumor
-0.1
516
Normal
-0.1
278
Normal
-0.1
666
Normal
-0.1
487
Tumor
-0.1
696
Normal
-0.1
212
Normal
-0.1
125
Tumor
-0.1
162
Normal
-0.1
955
Tumor
-0.1
538
Normal
-0.1
466
Normal
-0.1
494
Normal
-0.1
823
Tumor
-0.1
852
Normal
-0.1
436
Normal
-0.1
976
Normal
-0.1
258
Normal
-0.1
724
Normal
-0.1
737
Tumor
-0.1
1042
Normal
-0.1
952
Normal
-0.1
172
Normal
-0.1
526
Normal
-0.1
186
Normal
-0.1
671
Tumor
-0.1
312
Normal
-0.1
228
Normal
-0.1
448
Normal
-0.1
416
Normal
-0.1
456
Normal
-0.1
472
Normal
-0.1
883
Tumor
-0.2
686
Normal
-0.2
112
Tumor
-0.2
716
Normal
-0.2
328
Normal
-0.2
744
Normal
-0.2
364
Normal
-0.2
386
Normal
-0.2
257
Tumor
-0.2
722
Normal
-0.2
368
Normal
-0.2
473
Tumor
-0.2
1046
Normal
-0.2
284
Normal
-0.2
662
Normal
-0.2
864
Normal
-0.2
267
Tumor
-0.2
857
Tumor
-0.2
915
Tumor
-0.2
146
Normal
-0.2
685
Tumor
-0.2
727
Tumor
-0.2
554
Normal
-0.2
218
Normal
-0.2
488
Normal
-0.2
468
Normal
-0.2
778
Normal
-0.2
1028
Normal
-0.2
627
Tumor
-0.2
863
Tumor
-0.2
481
Tumor
-0.2
314
Normal
-0.2
518
Normal
-0.2
965
Tumor
-0.2
111
Normal
-0.2
138
Normal
-0.2
558
Normal
-0.2
958
Normal
-0.2
818
Normal
-0.2
862
Normal
-0.2
356
Normal
-0.2
484
Normal
-0.2
648
Normal
-0.3
866
Normal
-0.3
1026
Normal
-0.3
911
Tumor
-0.3
142
Normal
-0.3
564
Normal
-0.3
817
Tumor
-0.3
136
Normal
-0.3
642
Normal
-0.3
528
Normal
-0.3
298
Normal
-0.3
615
Tumor
-0.3
756
Normal
-0.3
388
Normal
-0.3
714
Normal
-0.3
672
Normal
-0.3
392
Normal
-0.3
1041
Tumor
-0.3
514
Normal
-0.3
394
Normal
-0.3
741
Tumor
-0.3
574
Normal
-0.3
491
Tumor
-0.3
127
Tumor
-0.3
357
Tumor
-0.3
968
Normal
-0.3
664
Normal
-0.3
396
Normal
-0.3
272
Normal
-0.3
474
Normal
-0.4
412
Normal
-0.4
534
Normal
-0.4
813
Tumor
-0.4
628
Normal
-0.4
884
Normal
-0.4
196
Normal
-0.4
128
Normal
-0.4
877
Tumor
-0.4
332
Normal
-0.4
824
Normal
-0.4
214
Normal
-0.4
227
Tumor
-0.4
232
Normal
-0.4
568
Normal
-0.4
571
Tumor
-0.4
376
Normal
-0.5
816
Normal
-0.5
132
Normal
-0.5
572
Normal
-0.5
918
Normal
-0.5
914
Normal
-0.5
695
Tumor
-0.5
636
Normal
-0.5
171
Tumor
-0.5
261
Tumor
-0.5
964
Normal
-0.5
926
Normal
-0.5
1032
Normal
-0.5
715
Tumor
-0.5
912
Normal
-0.5
1022
Normal
-0.5
546
Normal
-0.5
462
Normal
-0.5
452
Normal
-0.5
786
Normal
-0.5
618
Normal
-0.5
878
Normal
-0.6
746
Normal
-0.6
222
Normal
-0.6
363
Tumor
-0.7
1027
Tumor
-0.7
313
Tumor
-0.7
882
Normal
-0.8
924
Normal
-0.8
743
Tumor
-0.9
922
Normal
-1.3
1016
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
1013
Tumor
N/A
977
Tumor
N/A
978
Normal
N/A
981
Tumor
N/A
982
Normal
N/A
983
Tumor
N/A
984
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.