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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
216.7
nTPM
HPA Brain:
173.6
nTPM
GTEx:
216.7
nTPM
FANTOM5:
142.9
Scaled Tags Per Million
Pig:
79.3
nTPM
Mouse:
140.5
nTPM
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
173.6
Sample id
Sample description
nTPM
Amygdala nTPM: 173.6
2695
Female, age 67, right hemisphere
189.2
2514
Male, age 75, right hemisphere
181.2
2814
Male, age 76, right hemisphere
180.9
1987
Female, age 91, left hemisphere
162.3
2517
Female, age 94, left hemisphere
154.5
Basal amygdala nTPM: 145.0
2609
Male, age 75, right hemisphere
199.9
1955
Male, age 76, both hemispheres
143.9
2110
Male, age 80, left hemisphere
139.1
2827
Female, age 67, right hemisphere
135.9
2685
Female, age 94, left hemisphere
130.5
2243
Female, age 91, right hemisphere
120.9
Central amygdala nTPM: 157.6
2515
Male, age 75, right hemisphere
182.4
2826
Female, age 94, left hemisphere
181.4
1905
Male, age 76, both hemispheres
175.0
2239
Male, age 80, left hemisphere
132.2
2701
Female, age 91, right hemisphere
117.2
Corticomedial amygdala nTPM: 141.0
2428
Male, age 75, right hemisphere
202.8
2829
Male, age 80, left hemisphere
150.4
2240
Male, age 76, both hemispheres
125.9
2429
Female, age 94, left hemisphere
125.4
2242
Female, age 91, right hemisphere
124.3
2535
Female, age 67, right hemisphere
117.5
Lateral amygdala nTPM: 151.7
2516
Male, age 75, right hemisphere
199.1
2830
Female, age 67, right hemisphere
176.9
1883
Male, age 76, both hemispheres
154.7
2534
Female, age 94, left hemisphere
140.4
2256
Male, age 80, left hemisphere
134.7
2255
Female, age 91, right hemisphere
104.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
216.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 216.7
Samples: 152
Max nTPM: 484.5
Min nTPM: 70.3
Std nTPM: 58.1
Median nTPM: 206.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
484.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
426.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
395.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
394.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
386.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
331.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
325.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
318.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
293.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
291.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
287.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
286.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
285.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
281.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
281.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
280.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
279.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
279.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
277.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
273.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
271.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
269.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
267.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
266.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
265.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
260.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
258.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
258.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
258.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
257.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
256.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
255.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
254.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
254.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
254.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
253.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
253.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
251.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
250.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
248.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
243.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
240.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
240.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
239.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
238.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
234.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
230.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
229.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
229.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
225.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
225.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
225.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
225.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
225.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
223.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
223.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
222.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
222.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
220.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
219.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
218.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
217.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
216.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
215.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
214.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
212.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
212.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
212.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
210.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
210.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
210.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
209.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
208.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
208.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
207.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
206.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
206.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
205.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
205.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
205.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
204.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
204.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
204.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
204.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
203.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
203.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
199.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
199.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
199.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
198.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
198.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
197.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
196.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
195.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
195.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
191.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
190.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
189.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
188.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
187.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
187.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
187.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
187.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
185.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
182.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
182.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
181.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
181.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
181.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
181.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
178.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
178.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
178.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
178.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
177.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
177.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
175.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
175.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
175.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
174.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
174.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
174.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
173.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
172.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
172.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
172.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
172.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
171.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
171.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
170.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
167.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
167.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
166.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
165.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
163.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
161.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
158.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
157.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
156.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
156.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
155.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
154.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
153.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
152.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
149.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
146.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
142.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
139.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
126.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
122.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
88.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
70.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.