HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:34.5 nTPM
HPA Brain:31.2 nTPM
GTEx:34.5 nTPM
FANTOM5:66.8 Scaled Tags Per Million
Pig:1.3 nTPM
Mouse:41.3 nTPM
Allen mouse:10.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039129Antibody HPA050570
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 31.2
Sample id Sample description nTPM
Hippocampus
nTPM: 27.8
1898 Male, age 80, left hemisphere 33.6
2621 Female, age 67, right hemisphere 29.7
1911 Female, age 85, right hemisphere 28.9
2529 Female, age 94, left hemisphere 25.3
1855 Male, age 76, left hemisphere 25.1
2148 Female, age 91, left hemisphere 24.4
Dentate gyrus
nTPM: 25.7
2010 Male, age 76, both hemispheres 29.9
2246 Female, age 85, both hemispheres 29.9
1927 Female, age 91, both hemispheres 27.1
2531 Female, age 67, both hemispheres 25.3
2528 Male, age 74, both hemispheres 24.4
2530 Female, age 94, left hemisphere 17.6
Entorhinal gyrus
nTPM: 26.8
1938 Female, age 85, left hemisphere 30.3
1787 Male, age 76, left hemisphere 29.0
2764 Male, age 80, right hemisphere 26.5
2117 Female, age 91, right hemisphere 26.2
2686 Male, age 75, right hemisphere 24.7
2613 Female, age 94, left hemisphere 24.1
Hippocampus, CA1
nTPM: 29.1
2749 Male, age 80, left hemisphere 37.5
2045 Male, age 76, both hemispheres 29.0
2082 Female, age 91, right hemisphere 26.9
1873 Female, age 85, both hemispheres 26.3
2527 Male, age 74, both hemispheres 25.6
Hippocampus, CA2
nTPM: 27.2
1892 Male, age 76, both hemispheres 30.3
1963 Male, age 80, left hemisphere 28.9
1940 Female, age 85, left hemisphere 27.3
2249 Male, age 74, both hemispheres 26.4
2437 Female, age 94, left hemisphere 25.4
2113 Female, age 91, right hemisphere 24.7
Hippocampus, CA3
nTPM: 26.1
2137 Male, age 80, left hemisphere 31.6
1867 Male, age 76, both hemispheres 28.1
1891 Female, age 85, both hemispheres 27.2
2620 Female, age 94, left hemisphere 24.4
2436 Male, age 74, both hemispheres 24.3
2861 Female, age 67, both hemispheres 20.9
Parahippocampal cortex
nTPM: 27.7
1850 Male, age 80, both hemispheres 36.0
2693 Female, age 94, both hemispheres 30.9
2250 Female, age 67, right hemisphere 29.6
1933 Female, age 85, both hemispheres 27.8
2018 Male, age 76, both hemispheres 27.8
1990 Female, age 91, right hemisphere 26.5
2622 Female, age 67, right hemisphere 25.5
2245 Female, age 91, both hemispheres 25.2
2692 Male, age 74, both hemispheres 25.2
2532 Female, age 72, left hemisphere 22.0
Perirhinal gyrus
nTPM: 31.2
1794 Male, age 80, right hemisphere 34.9
1841 Female, age 85, right hemisphere 33.8
1847 Female, age 91, left hemisphere 29.7
2848 Male, age 76, right hemisphere 29.3
2521 Female, age 94, right hemisphere 28.6
Subiculum
nTPM: 26.1
1901 Male, age 80, both hemispheres 32.0
2042 Male, age 76, both hemispheres 30.7
1977 Female, age 85, both hemispheres 27.0
2729 Female, age 91, right hemisphere 24.8
2619 Male, age 74, both hemispheres 23.6
2438 Female, age 94, left hemisphere 18.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 34.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.5
Samples: 197

Max nTPM: 68.3
Min nTPM: 15.0
Std nTPM: 8.7
Median nTPM: 33.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 68.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 65.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 58.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 52.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 52.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 52.4
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 51.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 50.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 50.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 49.4
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 49.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 66.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.8
FF:10169-103B7 60 years, female 74.7
FF:10153-102I9 76 years, female 58.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 1.3
Pig sample Sample description nTPM
Subiculum
nTPM: 1.1
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.7
Sample A Female 0.7
Sample B Female 1.2
Sample C Male 1.0
Sample D Male 1.4
Dorsal hippocampus
nTPM: 0.8
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.1
Sample A Female 0.5
Sample B Female 1.3
Sample C Male 0.1
Sample D Male 1.3
Entorhinal cortex
nTPM: 0.9
Samples: 4

Max nTPM: 1.2
Min nTPM: 0.5
Sample A Female 1.2
Sample B Female 0.5
Sample C Male 1.1
Sample D Male 0.8
Ventral hippocampus
nTPM: 1.3
Samples: 4

Max nTPM: 1.6
Min nTPM: 1.0
Sample A Female 1.0
Sample B Female 1.5
Sample C Male 1.1
Sample D Male 1.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 41.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.2
Samples: 4

Max nTPM: 41.4
Min nTPM: 31.9
Sample A Male 31.9
Sample B Male 41.4
Sample C Female 38.8
Sample D Female 32.6
Hippocampal formation
nTPM: 41.3
Samples: 4

Max nTPM: 49.2
Min nTPM: 34.8
Sample A Male 49.2
Sample B Male 41.1
Sample C Female 34.8
Sample D Female 39.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.2
81600554 Antisense, RP_080402_04_F07, Mouse strain C57BL/6J (56 days, male) 11.2
70430720 Antisense, RP_050614_01_H09, Mouse strain C57BL/6J (56 days, male) 9.3

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