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HEAD AND NECK SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SFRP1 is potential prognostic, high expression is favorable in Head and Neck Squamous Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.8
Number of samples
492
Samples
Sample
Description
TPM
TCGA-P3-A5QE-01A
0 years, male, white, stage:Stage III, alive, 1559 days
210.2
TCGA-QK-A6IF-01A
0 years, male, white, stage:'--, alive, 704 days
202.2
TCGA-D6-6515-01A
0 years, female, white, stage:Stage II, dead, 403 days
160.8
TCGA-D6-6827-01A
0 years, female, white, stage:Stage I, alive, 568 days
137.5
TCGA-CV-5439-01A
0 years, male, white, stage:Stage IVA, dead, 546 days
133.9
TCGA-CV-7178-01A
0 years, female, white, stage:Stage IVA, dead, 2166 days
133.7
TCGA-CX-A4AQ-01A
0 years, male, white, stage:Stage IVA, alive, 1555 days
103.6
TCGA-D6-6516-01A
0 years, male, white, stage:Stage I, alive, 773 days
101.4
TCGA-CR-6488-01A
0 years, female, white, stage:Stage II, alive, 379 days
100.8
TCGA-HL-7533-01A
0 years, male, white, stage:'--, alive, 1057 days
97.3
TCGA-CR-7372-01A
0 years, male, white, stage:Stage I, alive, 759 days
80.3
TCGA-CV-5979-01A
0 years, male, white, stage:Stage IVA, alive, 1315 days
74.6
TCGA-CN-5361-01A
0 years, male, white, stage:Stage IVA, dead, 2120 days
66.4
TCGA-CN-6018-01A
0 years, female, white, stage:Stage IVA, dead, 580 days
66.0
TCGA-CQ-5330-01A
0 years, female, white, stage:Stage IVA, alive, 1897 days
64.8
TCGA-CV-7090-01A
0 years, male, white, stage:Stage II, alive, 5252 days
64.7
TCGA-CN-A642-01A
0 years, male, white, stage:Stage IVB, dead, 82 days
62.3
TCGA-CN-6022-01A
0 years, male, white, stage:Stage IVA, dead, 281 days
61.8
TCGA-CN-5370-01A
0 years, male, white, stage:Stage III, dead, 259 days
61.5
TCGA-CQ-A4CD-01A
0 years, male, white, stage:Stage IVA, alive, 1022 days
61.0
TCGA-CQ-6229-01A
0 years, male, white, stage:Stage II, alive, 1179 days
60.6
TCGA-CN-A49A-01A
0 years, male, white, stage:Stage IVB, dead, 526 days
57.5
TCGA-MZ-A5BI-01A
0 years, male, white, stage:'--, dead, 217 days
56.0
TCGA-BA-A4IH-01A
0 years, male, white, stage:'--, alive, 622 days
53.7
TCGA-CR-7373-01A
0 years, male, white, stage:Stage IVA, alive, 889 days
52.9
TCGA-IQ-7631-01A
0 years, female, white, stage:Stage II, alive, 1172 days
49.1
TCGA-KU-A6H8-01A
0 years, male, white, stage:Stage IVA, dead, 327 days
48.1
TCGA-D6-A4Z9-01A
0 years, male, white, stage:Stage IVA, alive, 539 days
47.9
TCGA-CV-7425-01A
0 years, female, white, stage:Stage III, dead, 1718 days
44.1
TCGA-CV-7091-01A
0 years, male, white, stage:Stage I, alive, 3381 days
41.4
TCGA-CV-7428-01A
0 years, male, white, stage:Stage IVA, dead, 1671 days
40.8
TCGA-H7-8501-01A
0 years, male, white, stage:Stage IVA, alive, 461 days
40.1
TCGA-CN-4735-01A
0 years, male, white, stage:Stage IVA, alive, 1737 days
39.9
TCGA-F7-A50G-01A
0 years, male, white, stage:Stage III, alive, 616 days
38.6
TCGA-DQ-7592-01A
0 years, male, american indian or alaska native, stage:'--, alive, 1143 days
38.2
TCGA-CN-A6V3-01A
0 years, male, white, stage:Stage IVA, alive, 742 days
37.3
TCGA-P3-A5QA-01A
0 years, male, stage:Stage I, alive, 2182 days
34.1
TCGA-CN-4730-01A
0 years, male, white, stage:Stage IVA, alive, 817 days
32.9
TCGA-UF-A718-01A
0 years, male, white, stage:Stage IVA, alive, 1971 days
31.2
TCGA-P3-A6T5-01A
0 years, female, white, stage:Stage IVA, dead, 882 days
30.8
TCGA-CV-5430-01A
0 years, male, white, stage:Stage IVA, alive, 4241 days
30.3
TCGA-BA-4075-01A
0 years, male, black or african american, stage:Stage III, dead, 283 days
30.1
TCGA-CR-7393-01A
0 years, male, white, stage:Stage III, alive, 993 days
29.7
TCGA-CV-6936-01A
0 years, male, white, stage:Stage IVA, dead, 166 days
29.7
TCGA-CQ-7069-01A
0 years, female, white, stage:Stage II, alive, 1274 days
28.6
TCGA-CN-6019-01A
0 years, male, white, stage:Stage IVA, alive, 1038 days
28.6
TCGA-CV-6948-01A
0 years, female, white, stage:Stage IVB, dead, 1289 days
28.1
TCGA-CN-6011-01A
0 years, male, white, stage:Stage IVA, alive, 933 days
27.9
TCGA-CV-7410-01A
0 years, male, white, stage:Stage III, dead, 6417 days
27.8
TCGA-CQ-5334-01A
0 years, male, white, stage:Stage IVA, dead, 129 days
27.4
TCGA-CV-7568-01A
0 years, female, white, stage:Stage IVA, dead, 927 days
27.1
TCGA-HD-7832-01A
0 years, male, white, stage:Stage IVA, alive, 836 days
27.0
TCGA-CN-5367-01A
0 years, female, white, stage:Stage IVA, dead, 352 days
27.0
TCGA-WA-A7H4-01A
0 years, male, white, stage:Stage II, alive, 443 days
26.8
TCGA-H7-8502-01A
0 years, male, white, stage:Stage IVA, alive, 458 days
26.2
TCGA-CV-7247-01A
0 years, male, white, stage:Stage III, dead, 577 days
26.2
TCGA-HD-8314-01A
0 years, male, white, stage:Stage III, alive, 670 days
25.9
TCGA-CR-7401-01A
0 years, male, white, stage:Stage I, alive, 1077 days
25.2
TCGA-CV-A463-01A
0 years, female, white, stage:Stage IVA, dead, 23 days
24.6
TCGA-CQ-5327-01A
0 years, female, asian, stage:Stage IVA, alive, 1660 days
24.5
TCGA-CR-7391-01A
0 years, female, white, stage:Stage I, alive, 913 days
24.5
TCGA-CQ-6227-01A
0 years, male, white, stage:Stage IVA, dead, 129 days
24.4
TCGA-BA-5556-01A
0 years, female, white, stage:Stage II, alive, 725 days
24.4
TCGA-CR-7392-01A
0 years, female, white, stage:Stage IVA, alive, 1425 days
24.2
TCGA-CV-5977-01A
0 years, male, white, stage:Stage IVA, alive, 1840 days
23.4
TCGA-CV-6954-01A
0 years, male, black or african american, stage:Stage IVA, dead, 2002 days
23.2
TCGA-P3-A6SW-01A
0 years, male, white, stage:Stage IVB, alive, 1120 days
22.8
TCGA-CV-6003-01A
0 years, female, white, stage:Stage III, alive, 1665 days
22.8
TCGA-F7-A50I-01A
0 years, male, white, stage:Stage IVA, alive, 92 days
22.6
TCGA-CR-6484-01A
0 years, female, asian, stage:Stage IVA, alive, 354 days
22.6
TCGA-CV-A6JZ-01A
0 years, male, white, stage:Stage II, alive, 714 days
22.5
TCGA-UF-A7JH-01A
0 years, male, black or african american, stage:Stage IVA, alive, 896 days
21.8
TCGA-MT-A51X-01A
0 years, male, white, stage:Stage IVA, alive, 242 days
21.6
TCGA-MT-A51W-01A
0 years, female, white, stage:Stage I, alive, 437 days
21.5
TCGA-CN-4738-01A
0 years, male, white, stage:Stage IVA, dead, 436 days
21.5
TCGA-CN-4740-01A
0 years, female, white, stage:Stage IVA, dead, 839 days
21.1
TCGA-CQ-5323-01A
0 years, male, white, stage:Stage I, alive, 1466 days
20.5
TCGA-CV-A464-01A
0 years, male, white, stage:Stage III, alive, 1722 days
20.3
TCGA-D6-6824-01A
0 years, male, white, stage:Stage IVA, alive, 77 days
20.1
TCGA-CN-5359-01A
0 years, male, white, stage:Stage IVA, dead, 377 days
20.1
TCGA-CR-6492-01A
0 years, male, white, stage:Stage III, alive, 479 days
20.0
TCGA-CR-7376-01A
0 years, male, white, stage:Stage III, alive, 972 days
19.9
TCGA-CV-7407-01A
0 years, female, white, stage:Stage II, dead, 1081 days
19.8
TCGA-CN-A49B-01A
0 years, male, white, stage:Stage III, alive, 904 days
19.2
TCGA-CQ-5326-01A
0 years, male, white, stage:Stage IVA, dead, 89 days
18.6
TCGA-P3-A6T8-01A
0 years, male, white, stage:Stage IVA, alive, 400 days
18.6
TCGA-CQ-A4CE-01A
0 years, female, stage:Stage II, alive, 897 days
18.5
TCGA-MT-A7BN-01A
0 years, male, white, stage:Stage IVA, alive, 469 days
18.5
TCGA-CV-7099-01A
0 years, female, white, stage:Stage II, dead, 243 days
18.2
TCGA-BA-A6DB-01A
0 years, female, white, stage:Stage I, alive, 216 days
18.1
TCGA-P3-A6SX-01A
0 years, male, white, stage:Stage III, dead, 1430 days
18.0
TCGA-CR-7380-01A
0 years, male, white, stage:Stage IVB, dead, 606 days
17.8
TCGA-QK-A652-01A
0 years, male, white, stage:Stage III, alive, 645 days
17.4
TCGA-CQ-6223-01A
0 years, male, white, stage:Stage II, alive, 1428 days
17.4
TCGA-IQ-7630-01A
0 years, male, white, stage:Stage II, alive, 485 days
17.2
TCGA-CR-7377-01A
0 years, male, white, stage:Stage IVA, dead, 279 days
17.0
TCGA-HD-8634-01A
0 years, female, white, stage:Stage I, dead, 385 days
16.9
TCGA-CV-7434-01A
0 years, male, white, stage:Stage IVA, dead, 218 days
16.9
TCGA-CN-4734-01A
0 years, male, white, stage:Stage II, alive, 1690 days
16.9
TCGA-CN-5360-01A
0 years, male, white, stage:Stage IVA, alive, 2169 days
16.6
TCGA-CR-6474-01A
0 years, male, white, stage:Stage IVA, dead, 564 days
16.3
TCGA-CV-5442-01A
0 years, female, white, stage:Stage IVA, alive, 2327 days
16.2
TCGA-CR-7379-01A
0 years, female, white, stage:Stage IVA, alive, 1036 days
15.9
TCGA-CN-4722-01A
0 years, female, white, stage:Stage II, alive, 1483 days
15.6
TCGA-CN-5358-01A
0 years, male, white, stage:Stage II, dead, 261 days
15.6
TCGA-CV-7438-01A
0 years, female, white, stage:Stage I, dead, 194 days
15.3
TCGA-CR-7367-01A
0 years, male, white, stage:Stage IVA, alive, 1440 days
15.3
TCGA-IQ-A61E-01A
0 years, female, white, stage:Stage III, alive, 1147 days
15.1
TCGA-BA-5558-01A
0 years, male, white, stage:'--, alive, 1995 days
15.1
TCGA-F7-A50J-01A
0 years, female, white, stage:Stage III, alive, 947 days
14.8
TCGA-CV-5971-01A
0 years, male, white, stage:Stage IVA, alive, 701 days
14.6
TCGA-CN-5365-01A
0 years, male, white, stage:Stage IVB, dead, 351 days
14.6
TCGA-CN-6996-01A
0 years, female, white, stage:Stage IVA, dead, 530 days
14.3
TCGA-D6-A6EM-01A
0 years, female, white, stage:Stage III, alive, 232 days
14.2
TCGA-IQ-7632-01A
0 years, female, white, stage:Stage IVA, alive, 441 days
14.1
TCGA-CQ-A4CG-01A
0 years, female, white, stage:Stage III, dead, 430 days
14.1
TCGA-CN-6017-01A
0 years, male, white, stage:Stage IVA, dead, 853 days
14.0
TCGA-CQ-5329-01A
0 years, female, white, stage:Stage II, alive, 2143 days
13.9
TCGA-CR-7397-01A
0 years, male, white, stage:Stage IVA, alive, 754 days
13.8
TCGA-CV-5970-01A
0 years, male, white, stage:Stage IVA, dead, 406 days
13.7
TCGA-CN-5369-01A
0 years, female, white, stage:Stage IVA, dead, 1 days
13.6
TCGA-CV-A6JE-01A
0 years, male, white, stage:'--, alive, 1075 days
13.3
TCGA-D6-A6EP-01A
0 years, male, white, stage:Stage III, alive, 424 days
13.2
TCGA-CR-6470-01A
0 years, male, white, stage:Stage II, alive, 1521 days
12.9
TCGA-CV-7183-01A
0 years, male, white, stage:Stage II, alive, 3981 days
12.8
TCGA-QK-A8ZB-01A
0 years, male, black or african american, stage:Stage IVA, alive, 542 days
12.8
TCGA-CX-7085-01A
0 years, female, white, stage:Stage I, alive, 321 days
12.6
TCGA-CV-6934-01A
0 years, female, white, stage:Stage IVA, dead, 65 days
12.6
TCGA-CR-7383-01A
0 years, female, white, stage:Stage I, dead, 521 days
12.5
TCGA-CN-4733-01A
0 years, male, white, stage:Stage III, alive, 1586 days
12.5
TCGA-CQ-5331-01A
0 years, female, white, stage:'--, alive, 1399 days
12.2
TCGA-CV-A6JY-01A
0 years, male, white, stage:Stage IVA, alive, 646 days
12.1
TCGA-WA-A7GZ-01A
0 years, male, white, stage:'--, dead, 625 days
11.9
TCGA-F7-8298-01A
0 years, male, white, stage:Stage I, alive, 995 days
11.8
TCGA-CV-7245-01A
0 years, male, white, stage:Stage IVA, alive, 797 days
11.8
TCGA-HD-8224-01A
0 years, male, white, stage:Stage IVA, dead, 446 days
11.7
TCGA-CV-A468-01A
0 years, male, stage:Stage IVA, dead, 464 days
11.6
TCGA-QK-A6IG-01A
0 years, male, white, stage:Stage III, dead, 222 days
11.5
TCGA-CR-6478-01A
0 years, female, white, stage:'--, dead, 183 days
11.3
TCGA-CN-6023-01A
0 years, male, white, stage:Stage IVA, alive, 1584 days
11.1
TCGA-CV-6938-01A
0 years, male, white, stage:Stage II, dead, 144 days
11.1
TCGA-CN-6994-01A
0 years, male, white, stage:Stage IVA, alive, 1183 days
11.0
TCGA-CV-7423-01A
0 years, male, white, stage:Stage II, dead, 3059 days
10.8
TCGA-CN-4737-01A
0 years, male, white, stage:Stage IVA, alive, 625 days
10.6
TCGA-CV-7238-01A
0 years, female, white, stage:Stage II, alive, 2727 days
10.6
TCGA-CV-A45Y-01A
0 years, male, american indian or alaska native, stage:Stage IVA, dead, 2703 days
10.6
TCGA-CV-7414-01A
0 years, male, white, stage:Stage IVA, dead, 14 days
10.4
TCGA-CQ-5325-01A
0 years, male, white, stage:Stage I, dead, 654 days
10.3
TCGA-DQ-5624-01A
0 years, female, white, stage:'--, alive, 1778 days
10.3
TCGA-CQ-A4CH-01A
0 years, male, asian, stage:Stage II, dead, 379 days
10.3
TCGA-CV-7406-01A
0 years, male, white, stage:Stage II, dead, 1748 days
10.2
TCGA-F7-A61S-01A
0 years, male, white, stage:Stage III, alive, 576 days
9.9
TCGA-CN-4741-01A
0 years, male, white, stage:Stage IVA, alive, 2239 days
9.9
TCGA-CQ-6218-01A
0 years, female, white, stage:Stage IVA, alive, 1253 days
9.8
TCGA-MT-A67A-01A
0 years, female, white, stage:Stage I, alive, 914 days
9.6
TCGA-CQ-7063-01A
0 years, female, white, stage:Stage I, alive, 2133 days
9.6
TCGA-DQ-5630-01A
0 years, male, white, stage:'--, alive, 1030 days
9.6
TCGA-CR-7382-01A
0 years, male, white, stage:Stage IVA, alive, 796 days
9.5
TCGA-D6-8568-01A
0 years, male, white, stage:Stage II, alive, 759 days
9.4
TCGA-P3-A6T2-01A
0 years, male, white, stage:Stage IVA, alive, 2298 days
9.1
TCGA-CV-7427-01A
0 years, female, white, stage:Stage II, dead, 4760 days
9.1
TCGA-CR-6471-01A
0 years, male, white, stage:Stage IVA, dead, 1202 days
9.1
TCGA-CQ-A4C6-01A
0 years, male, asian, stage:Stage II, alive, 1353 days
9.0
TCGA-CQ-A4CB-01A
0 years, male, stage:Stage III, alive, 893 days
9.0
TCGA-CR-7395-01A
0 years, female, white, stage:Stage II, alive, 930 days
8.9
TCGA-CV-7102-01A
0 years, female, white, stage:Stage IVA, dead, 56 days
8.8
TCGA-CR-7368-01A
0 years, male, white, stage:Stage IVA, alive, 1245 days
8.7
TCGA-BB-8596-01A
0 years, female, white, stage:Stage IVA, alive, 2161 days
8.6
TCGA-CV-7261-01A
0 years, male, white, stage:Stage IVA, alive, 1512 days
8.5
TCGA-CR-7394-01A
0 years, male, white, stage:Stage IVA, alive, 1346 days
8.4
TCGA-CV-5436-01A
0 years, male, stage:Stage IVA, dead, 584 days
8.4
TCGA-F7-7848-01A
0 years, male, white, stage:Stage IVA, alive, 1131 days
8.3
TCGA-CR-7374-01A
0 years, female, white, stage:'--, alive, 30 days
8.0
TCGA-CV-6942-01A
0 years, female, white, stage:Stage II, alive, 4282 days
8.0
TCGA-F7-8489-01A
0 years, male, white, stage:Stage II, alive, 658 days
7.9
TCGA-HD-7753-01A
0 years, male, black or african american, stage:Stage I, alive, 866 days
7.9
TCGA-CR-7386-01A
0 years, male, white, stage:Stage IVA, alive, 1430 days
7.8
TCGA-CV-5444-01A
0 years, male, black or african american, stage:Stage IVA, alive, 2437 days
7.7
TCGA-CV-6952-01A
0 years, female, white, stage:Stage IVA, dead, 185 days
7.6
TCGA-DQ-7588-01A
0 years, male, white, stage:'--, dead, 427 days
7.6
TCGA-CV-7235-01A
0 years, male, white, stage:Stage II, alive, 2347 days
7.5
TCGA-CR-7371-01A
0 years, female, white, stage:Stage III, dead, 94 days
7.5
TCGA-CV-6955-01A
0 years, female, white, stage:Stage II, dead, 334 days
7.5
TCGA-T2-A6WX-01A
0 years, female, white, stage:'--, dead, 209 days
7.4
TCGA-HD-8635-01A
0 years, female, white, stage:Stage III, alive, 695 days
7.4
TCGA-CV-7254-01A
0 years, male, white, stage:Stage II, dead, 1459 days
7.2
TCGA-CV-6959-01A
0 years, male, white, stage:Stage III, dead, 256 days
7.2
TCGA-P3-A6T4-01A
0 years, male, white, stage:Stage IVA, dead, 62 days
7.0
TCGA-CV-6961-01A
0 years, male, white, stage:Stage II, dead, 76 days
6.9
TCGA-F7-A623-01A
0 years, male, white, stage:Stage IVA, alive, 616 days
6.9
TCGA-CN-4726-01A
0 years, male, white, stage:Stage IVA, dead, 142 days
6.9
TCGA-CQ-A4C7-01A
0 years, male, white, stage:Stage III, dead, 353 days
6.7
TCGA-CV-7104-01A
0 years, female, white, stage:Stage IVA, dead, 393 days
6.6
TCGA-CN-5373-01A
0 years, female, white, stage:Stage I, alive, 1584 days
6.6
TCGA-IQ-A61J-01A
0 years, male, white, stage:Stage IVA, alive, 1021 days
6.6
TCGA-CR-7370-01A
0 years, female, white, stage:'--, alive, 105 days
6.3
TCGA-CN-6010-01A
0 years, male, white, stage:Stage IVA, alive, 1523 days
6.2
TCGA-CV-7411-01A
0 years, female, white, stage:Stage IVA, dead, 2717 days
6.2
TCGA-BA-4078-01A
0 years, male, white, stage:'--, dead, 276 days
6.1
TCGA-CV-6939-01A
0 years, male, white, stage:Stage IVA, dead, 666 days
6.1
TCGA-CV-7236-01A
0 years, female, white, stage:Stage IVA, dead, 144 days
6.1
TCGA-CV-A45T-01A
0 years, female, white, stage:'--, dead, 4856 days
6.0
TCGA-BB-4227-01A
0 years, male, white, stage:Stage IVA, alive, 134 days
5.9
TCGA-TN-A7HL-01A
0 years, male, white, stage:Stage IVA, alive, 619 days
5.9
TCGA-F7-A61V-01A
0 years, male, white, stage:Stage II, alive, 759 days
5.8
TCGA-CV-A45P-01A
0 years, female, white, stage:Stage I, alive, 639 days
5.8
TCGA-CV-7097-01A
0 years, male, white, stage:Stage II, dead, 385 days
5.7
TCGA-CQ-6219-01A
0 years, female, white, stage:Stage IVA, dead, 479 days
5.7
TCGA-D6-A4ZB-01A
0 years, male, white, stage:Stage III, alive, 376 days
5.7
TCGA-CV-7089-01A
0 years, male, white, stage:Stage IVA, dead, 1972 days
5.6
TCGA-D6-6826-01A
0 years, female, white, stage:Stage IVA, dead, 348 days
5.5
TCGA-CV-A6JN-01A
0 years, male, white, stage:'--, alive, 906 days
5.4
TCGA-BA-6870-01A
0 years, female, black or african american, stage:'--, dead, 451 days
5.3
TCGA-CR-7399-01A
0 years, female, white, stage:Stage IVA, alive, 181 days
5.3
TCGA-CR-7402-01A
0 years, male, white, stage:'--, alive, 911 days
5.3
TCGA-C9-A480-01A
0 years, female, asian, stage:Stage III, alive, 386 days
5.2
TCGA-BA-5557-01A
0 years, female, stage:Stage III, alive, 623 days
5.2
TCGA-CR-7388-01A
0 years, female, white, stage:'--, dead, 823 days
5.2
TCGA-CN-4736-01A
0 years, female, white, stage:'--, dead, 395 days
5.2
TCGA-UF-A7JD-01A
0 years, male, stage:Stage IVA, dead, 739 days
5.2
TCGA-CN-6992-01A
0 years, male, white, stage:Stage IVA, alive, 1066 days
5.1
TCGA-MZ-A6I9-01A
0 years, male, white, stage:'--, dead, 489 days
5.1
TCGA-CN-4725-01A
0 years, male, white, stage:Stage II, alive, 1157 days
5.1
TCGA-CR-6477-01A
0 years, female, white, stage:'--, alive, 514 days
5.1
TCGA-CR-7389-01A
0 years, male, black or african american, stage:'--, alive, 392 days
5.0
TCGA-CQ-6222-01A
0 years, male, white, stage:Stage IVA, alive, 2016 days
4.9
TCGA-CV-7255-01A
0 years, female, white, stage:Stage IVA, dead, 64 days
4.9
TCGA-CV-A45Z-01A
0 years, male, white, stage:'--, dead, 1466 days
4.9
TCGA-BA-5151-01A
0 years, male, white, stage:Stage IVA, alive, 722 days
4.9
TCGA-CV-7435-01A
0 years, female, white, stage:Stage IVA, dead, 4680 days
4.8
TCGA-CV-7263-01A
0 years, male, black or african american, stage:Stage II, dead, 560 days
4.8
TCGA-CN-6998-01A
0 years, male, white, stage:Stage IVA, dead, 357 days
4.6
TCGA-CV-7177-01A
0 years, female, white, stage:Stage II, dead, 663 days
4.6
TCGA-MT-A67D-01A
0 years, male, white, stage:Stage II, alive, 56 days
4.6
TCGA-CV-6943-01A
0 years, male, white, stage:Stage III, dead, 602 days
4.6
TCGA-CV-6945-01A
0 years, male, white, stage:Stage IVA, dead, 366 days
4.4
TCGA-CN-6016-01A
0 years, male, white, stage:Stage IVA, alive, 1443 days
4.4
TCGA-CQ-7068-01A
0 years, female, white, stage:Stage II, alive, 1309 days
4.4
TCGA-MT-A67F-01A
0 years, female, white, stage:Stage IVA, alive, 384 days
4.4
TCGA-IQ-A61O-01A
0 years, male, white, stage:Stage IVA, dead, 421 days
4.4
TCGA-UF-A7JK-01A
0 years, male, stage:Stage IVA, dead, 424 days
4.3
TCGA-CR-7404-01A
0 years, male, white, stage:'--, alive, 1472 days
4.3
TCGA-CV-A45V-01A
0 years, female, white, stage:Stage IVA, dead, 32 days
4.3
TCGA-BA-A4IF-01A
0 years, male, white, stage:'--, alive, 895 days
4.2
TCGA-BA-5559-01A
0 years, male, white, stage:'--, dead, 2083 days
4.2
TCGA-BB-A5HY-01A
0 years, male, white, stage:Stage IVA, dead, 321 days
4.2
TCGA-DQ-5625-01A
0 years, female, white, stage:'--, dead, 1133 days
4.1
TCGA-CV-7416-01A
0 years, female, white, stage:Stage IVA, dead, 763 days
4.0
TCGA-CR-5248-01A
0 years, male, white, stage:'--, alive, 1663 days
3.9
TCGA-HD-A6HZ-01A
0 years, female, white, stage:Stage III, alive, 111 days
3.8
TCGA-CQ-6220-01A
0 years, male, white, stage:Stage III, dead, 985 days
3.8
TCGA-QK-A6IJ-01A
0 years, male, white, stage:Stage III, alive, 387 days
3.8
TCGA-CN-5355-01A
0 years, male, black or african american, stage:Stage IVA, alive, 1278 days
3.7
TCGA-CV-6441-01A
0 years, male, white, stage:Stage III, dead, 292 days
3.7
TCGA-CV-7446-01A
0 years, male, white, stage:Stage IVA, dead, 1093 days
3.6
TCGA-P3-A6T0-01A
0 years, female, white, stage:Stage IVA, alive, 578 days
3.6
TCGA-BA-A6DG-01A
0 years, male, white, stage:'--, dead, 69 days
3.5
TCGA-CV-7248-01A
0 years, female, black or african american, stage:Stage IVA, dead, 521 days
3.5
TCGA-CN-5356-01A
0 years, male, white, stage:Stage III, alive, 1409 days
3.3
TCGA-CV-7418-01A
0 years, male, black or african american, stage:Stage IVA, dead, 789 days
3.2
TCGA-CN-6989-01A
0 years, male, white, stage:Stage IVA, dead, 980 days
3.2
TCGA-P3-A6T7-01A
0 years, male, white, stage:Stage IVA, dead, 487 days
3.2
TCGA-CN-A6V6-01A
0 years, male, white, stage:Stage IVA, alive, 635 days
3.1
TCGA-CV-A465-01A
0 years, male, white, stage:Stage III, dead, 215 days
3.1
TCGA-CV-7180-01A
0 years, male, white, stage:Stage II, dead, 327 days
3.0
TCGA-MZ-A7D7-01A
0 years, male, white, stage:Stage IVA, alive, 547 days
3.0
TCGA-CQ-7065-01A
0 years, male, asian, stage:Stage II, alive, 1628 days
3.0
TCGA-BB-4217-01A
0 years, male, black or african american, stage:Stage IVA, alive, 187 days
3.0
TCGA-CV-5440-01A
0 years, male, white, stage:Stage IVA, alive, 3270 days
3.0
TCGA-D6-A6EK-01A
0 years, male, white, stage:Stage III, alive, 875 days
3.0
TCGA-CR-7369-01A
0 years, male, white, stage:Stage IVA, dead, 1090 days
2.8
TCGA-CR-7365-01A
0 years, male, white, stage:Stage IVA, alive, 1191 days
2.8
TCGA-CQ-A4C9-01A
0 years, male, stage:Stage III, alive, 707 days
2.8
TCGA-CN-A498-01A
0 years, female, white, stage:Stage III, dead, 773 days
2.8
TCGA-CV-6951-01A
0 years, male, white, stage:Stage IVA, dead, 915 days
2.8
TCGA-IQ-A61H-01A
0 years, male, white, stage:Stage II, alive, 1138 days
2.8
TCGA-CV-7101-01A
0 years, male, white, stage:Stage II, dead, 160 days
2.8
TCGA-QK-AA3J-01A
0 years, male, black or african american, stage:Stage I, alive, 466 days
2.8
TCGA-BA-5555-01A
0 years, male, black or african american, stage:Stage IVA, alive, 520 days
2.7
TCGA-BA-A6DJ-01A
0 years, male, asian, stage:Stage IVA, dead, 407 days
2.6
TCGA-QK-AA3K-01A
0 years, male, black or african american, stage:Stage IVA, alive, 253 days
2.6
TCGA-UF-A7JA-01A
0 years, female, white, stage:Stage IVA, alive, 2265 days
2.5
TCGA-CV-7242-01A
0 years, female, white, stage:Stage II, alive, 1095 days
2.5
TCGA-UF-A7JJ-01A
0 years, male, stage:Stage IVA, alive, 549 days
2.5
TCGA-D6-6823-01A
0 years, male, white, stage:Stage II, alive, 701 days
2.4
TCGA-CN-4723-01A
0 years, male, white, stage:Stage IVA, alive, 1699 days
2.4
TCGA-H7-7774-01A
0 years, female, white, stage:Stage IVA, alive, 407 days
2.4
TCGA-D6-6825-01A
0 years, male, white, stage:Stage I, alive, 491 days
2.4
TCGA-CN-6012-01A
0 years, male, white, stage:Stage IVA, alive, 1460 days
2.3
TCGA-CN-5363-01A
0 years, male, black or african american, stage:Stage IVB, dead, 253 days
2.3
TCGA-IQ-A6SH-01A
0 years, male, black or african american, stage:Stage III, alive, 471 days
2.3
TCGA-F7-A61W-01A
0 years, male, asian, stage:Stage IVA, alive, 14 days
2.1
TCGA-H7-A76A-01A
0 years, male, white, stage:'--, alive, 637 days
2.1
TCGA-CN-A63T-01A
0 years, male, white, stage:Stage IVA, alive, 225 days
2.1
TCGA-CV-5434-01A
0 years, male, black or african american, stage:Stage IVA, dead, 3314 days
2.1
TCGA-BA-6871-01A
0 years, male, white, stage:'--, dead, 108 days
2.1
TCGA-CQ-A4CI-01A
0 years, male, white, stage:Stage III, alive, 950 days
2.0
TCGA-CV-A45R-01A
0 years, male, white, stage:Stage III, alive, 5480 days
2.0
TCGA-CV-A45U-01A
0 years, male, white, stage:Stage IVA, dead, 1079 days
2.0
TCGA-CV-6950-01A
0 years, male, white, stage:Stage IVA, dead, 459 days
2.0
TCGA-CV-A45O-01A
0 years, male, white, stage:'--, alive, 851 days
2.0
TCGA-UF-A7J9-01A
0 years, male, white, stage:Stage IVA, alive, 1358 days
2.0
TCGA-CV-7103-01A
0 years, male, white, stage:Stage IVA, dead, 1591 days
2.0
TCGA-UF-A71A-01A
0 years, male, white, stage:Stage IVA, dead, 86 days
1.9
TCGA-CV-A45W-01A
0 years, male, white, stage:Stage II, dead, 1398 days
1.9
TCGA-HD-A633-01A
0 years, male, white, stage:Stage IVA, alive, 421 days
1.9
TCGA-CV-A6JD-01A
0 years, female, white, stage:'--, dead, 182 days
1.9
TCGA-CN-6021-01A
0 years, female, white, stage:'--, dead, 276 days
1.8
TCGA-CR-6482-01A
0 years, male, black or african american, stage:'--, alive, 345 days
1.8
TCGA-CR-5249-01A
0 years, female, white, stage:Stage II, alive, 1152 days
1.8
TCGA-BA-6869-01A
0 years, male, white, stage:Stage III, alive, 644 days
1.8
TCGA-CR-7364-01A
0 years, male, white, stage:Stage III, alive, 1435 days
1.8
TCGA-BA-A4IG-01A
0 years, male, white, stage:'--, alive, 855 days
1.7
TCGA-TN-A7HJ-01A
0 years, male, white, stage:Stage IVA, alive, 403 days
1.7
TCGA-CN-6013-01A
0 years, male, white, stage:Stage IVA, dead, 727 days
1.7
TCGA-QK-A64Z-01A
0 years, female, white, stage:Stage IVA, dead, 641 days
1.7
TCGA-CN-A6V7-01A
0 years, male, white, stage:Stage IVA, alive, 594 days
1.7
TCGA-CR-6467-01A
0 years, male, white, stage:Stage III, alive, 1777 days
1.6
TCGA-D6-A6EN-01A
0 years, male, white, stage:Stage III, alive, 687 days
1.6
TCGA-CR-5243-01A
0 years, male, white, stage:'--, alive, 2562 days
1.6
TCGA-HD-A6I0-01A
0 years, male, white, stage:Stage IVA, alive, 210 days
1.6
TCGA-CV-6940-01A
0 years, female, white, stage:Stage III, dead, 804 days
1.5
TCGA-BA-A6DE-01A
0 years, female, white, stage:Stage II, alive, 440 days
1.5
TCGA-QK-A6II-01A
0 years, male, white, stage:Stage IVA, dead, 284 days
1.5
TCGA-UF-A7JS-01A
0 years, male, white, stage:Stage IVA, dead, 680 days
1.5
TCGA-CQ-6221-01A
0 years, male, white, stage:'--, alive, 1000 days
1.5
TCGA-BA-A6DI-01A
0 years, male, black or african american, stage:'--, dead, 336 days
1.5
TCGA-BB-A6UM-01A
0 years, male, white, stage:Stage III, alive, 393 days
1.4
TCGA-CN-A641-01A
0 years, male, white, stage:Stage IVA, alive, 367 days
1.4
TCGA-T2-A6WZ-01A
0 years, male, white, stage:'--, dead, 484 days
1.4
TCGA-D6-6517-01A
0 years, male, white, stage:Stage III, alive, 292 days
1.4
TCGA-CV-5976-01A
0 years, male, white, stage:Stage IVA, alive, 1478 days
1.4
TCGA-D6-8569-01A
0 years, male, white, stage:Stage II, alive, 770 days
1.3
TCGA-CQ-6224-01A
0 years, male, white, stage:Stage IVA, alive, 1721 days
1.3
TCGA-CV-6436-01A
0 years, male, white, stage:Stage IVA, alive, 1899 days
1.3
TCGA-UF-A7JF-01A
0 years, male, white, stage:Stage IVA, alive, 1686 days
1.3
TCGA-CR-7398-01A
0 years, female, white, stage:Stage II, alive, 156 days
1.3
TCGA-BA-6873-01A
0 years, male, white, stage:Stage IVA, alive, 122 days
1.3
TCGA-D6-A6EO-01A
0 years, male, white, stage:Stage IVA, alive, 759 days
1.3
TCGA-QK-A8Z7-01A
0 years, male, black or african american, stage:Stage IVA, alive, 392 days
1.3
TCGA-UF-A71D-01A
0 years, female, white, stage:Stage IVA, alive, 1461 days
1.3
TCGA-BB-4223-01A
0 years, male, white, stage:Stage IVA, alive, 3221 days
1.2
TCGA-CV-5432-01A
0 years, male, white, stage:Stage III, alive, 3930 days
1.2
TCGA-CX-7219-01A
0 years, male, black or african american, stage:Stage IVA, alive, 1045 days
1.2
TCGA-BA-A4II-01A
0 years, male, white, stage:Stage II, alive, 918 days
1.2
TCGA-4P-AA8J-01A
0 years, male, black or african american, stage:Stage IVA, alive, 102 days
1.2
TCGA-CV-7433-01A
0 years, male, white, stage:Stage IVA, dead, 601 days
1.2
TCGA-QK-A8ZA-01A
0 years, male, black or african american, stage:'--, dead, 371 days
1.2
TCGA-QK-A6VC-01A
0 years, female, black or african american, stage:Stage IVA, alive, 600 days
1.1
TCGA-CN-6020-01A
0 years, male, black or african american, stage:Stage III, dead, 205 days
1.1
TCGA-BA-5153-01A
0 years, male, white, stage:'--, dead, 1762 days
1.1
TCGA-CV-7430-01A
0 years, male, white, stage:Stage IVA, dead, 495 days
1.1
TCGA-CQ-6225-01A
0 years, male, white, stage:Stage III, dead, 403 days
1.1
TCGA-CN-A63W-01A
0 years, female, white, stage:Stage IVA, dead, 377 days
1.1
TCGA-HD-7831-01A
0 years, male, white, stage:Stage IVA, alive, 667 days
1.1
TCGA-CR-6472-01A
0 years, male, white, stage:'--, alive, 1050 days
1.1
TCGA-CN-4728-01A
0 years, male, white, stage:Stage IVA, alive, 1724 days
1.1
TCGA-HD-7229-01A
0 years, male, white, stage:Stage IVA, alive, 1027 days
1.0
TCGA-T3-A92M-01A
0 years, male, black or african american, stage:Stage IVA, alive, 417 days
1.0
TCGA-DQ-7591-01A
0 years, male, white, stage:'--, alive, 622 days
1.0
TCGA-CV-A461-01A
0 years, male, white, stage:'--, dead, 2064 days
0.9
TCGA-CN-4729-01A
0 years, male, white, stage:Stage III, alive, 392 days
0.9
TCGA-UF-A71B-01A
0 years, male, white, stage:Stage IVA, alive, 1506 days
0.9
TCGA-CR-6487-01A
0 years, male, white, stage:Stage I, alive, 234 days
0.8
TCGA-D6-A74Q-01A
0 years, male, white, stage:Stage IVA, alive, 710 days
0.8
TCGA-CV-6960-01A
0 years, male, black or african american, stage:Stage III, dead, 862 days
0.8
TCGA-CV-A6JU-01A
0 years, female, white, stage:Stage IVB, alive, 110 days
0.8
TCGA-HD-A4C1-01A
0 years, female, black or african american, stage:Stage IVA, alive, 11 days
0.8
TCGA-BA-A8YP-01A
0 years, male, black or african american, stage:Stage IVB, alive, 499 days
0.8
TCGA-CV-7100-01A
0 years, male, white, stage:Stage III, dead, 274 days
0.8
TCGA-CQ-7071-01A
0 years, female, white, stage:Stage III, alive, 1311 days
0.8
TCGA-UF-A7JV-01A
0 years, female, white, stage:Stage IVA, dead, 90 days
0.8
TCGA-BA-A6DD-01A
0 years, male, black or african american, stage:Stage IVA, dead, 173 days
0.8
TCGA-CN-4731-01A
0 years, female, white, stage:Stage IVA, dead, 998 days
0.8
TCGA-F7-A620-01A
0 years, male, white, stage:Stage III, alive, 543 days
0.8
TCGA-CN-A63U-01A
0 years, male, white, stage:Stage IVA, alive, 964 days
0.8
TCGA-D6-A6EQ-01A
0 years, male, white, stage:Stage IVA, alive, 368 days
0.7
TCGA-RS-A6TO-01A
0 years, female, white, stage:Stage IVA, dead, 387 days
0.7
TCGA-CV-7421-01A
0 years, male, white, stage:Stage IVA, dead, 2 days
0.7
TCGA-CX-7086-01A
0 years, male, black or african american, stage:Stage III, alive, 573 days
0.7
TCGA-CR-5250-01A
0 years, male, white, stage:'--, alive, 799 days
0.7
TCGA-CV-6937-01A
0 years, male, white, stage:Stage II, dead, 624 days
0.7
TCGA-BB-A6UO-01A
0 years, female, white, stage:Stage IVA, dead, 268 days
0.7
TCGA-CV-7252-01A
0 years, female, black or african american, stage:Stage IVA, dead, 151 days
0.7
TCGA-KU-A66S-01A
0 years, female, white, stage:Stage III, dead, 406 days
0.7
TCGA-IQ-A61G-01A
0 years, male, white, stage:Stage IVA, alive, 360 days
0.7
TCGA-CN-5374-01A
0 years, female, white, stage:Stage IVA, dead, 1732 days
0.7
TCGA-CR-6481-01A
0 years, male, white, stage:'--, alive, 311 days
0.7
TCGA-CN-4739-01A
0 years, male, white, stage:Stage IVA, dead, 1394 days
0.7
TCGA-T2-A6X0-01A
0 years, male, white, stage:'--, alive, 216 days
0.7
TCGA-CN-4742-01A
0 years, female, white, stage:Stage IVA, dead, 397 days
0.6
TCGA-H7-A6C4-01A
0 years, female, white, stage:Stage IVA, dead, 414 days
0.6
TCGA-CN-A63V-01A
0 years, male, white, stage:Stage IVA, alive, 679 days
0.6
TCGA-CN-6997-01A
0 years, male, white, stage:Stage IVA, dead, 988 days
0.6
TCGA-DQ-5629-01A
0 years, male, white, stage:'--, dead, 941 days
0.6
TCGA-CN-A499-01A
0 years, female, white, stage:Stage II, alive, 717 days
0.6
TCGA-CV-5978-01A
0 years, female, black or african american, stage:Stage IVB, dead, 215 days
0.6
TCGA-CR-5247-01A
0 years, male, black or african american, stage:'--, alive, 358 days
0.6
TCGA-CV-7415-01A
0 years, male, white, stage:Stage IVA, dead, 695 days
0.6
TCGA-BB-4228-01A
0 years, male, white, stage:Stage III, alive, 559 days
0.6
TCGA-CV-A6K1-01A
0 years, male, white, stage:Stage IVA, alive, 685 days
0.6
TCGA-CV-A45X-01A
0 years, male, white, stage:Stage IVA, dead, 198 days
0.6
TCGA-CQ-5333-01A
0 years, male, white, stage:Stage II, dead, 341 days
0.6
TCGA-CV-7413-01A
0 years, female, white, stage:Stage II, dead, 294 days
0.5
TCGA-CN-5364-01A
0 years, male, white, stage:Stage IVA, dead, 493 days
0.5
TCGA-CV-6962-01A
0 years, male, white, stage:Stage IVA, dead, 126 days
0.5
TCGA-CQ-5332-01A
0 years, male, white, stage:Stage III, dead, 317 days
0.5
TCGA-CV-5443-01A
0 years, male, black or african american, stage:Stage III, alive, 2784 days
0.5
TCGA-BA-4076-01A
0 years, male, white, stage:'--, dead, 415 days
0.5
TCGA-CR-6480-01A
0 years, male, white, stage:'--, alive, 362 days
0.5
TCGA-UF-A71E-01A
0 years, male, white, stage:Stage IVA, dead, 1504 days
0.5
TCGA-P3-A6T6-01A
0 years, male, white, stage:Stage IVA, dead, 395 days
0.5
TCGA-CV-A460-01A
0 years, male, white, stage:'--, dead, 1838 days
0.5
TCGA-BA-5152-01A
0 years, male, white, stage:Stage IVA, alive, 1288 days
0.5
TCGA-CV-6935-01A
0 years, male, white, stage:Stage IVA, dead, 295 days
0.5
TCGA-BA-4074-01A
0 years, male, white, stage:Stage IVA, dead, 462 days
0.5
TCGA-P3-A5QF-01A
0 years, male, white, stage:Stage IVA, dead, 330 days
0.5
TCGA-UF-A7JC-01A
0 years, male, white, stage:Stage IVA, dead, 546 days
0.5
TCGA-CN-A497-01A
0 years, male, stage:Stage III, alive, 1065 days
0.4
TCGA-CX-7082-01A
0 years, male, white, stage:Stage IVA, dead, 11 days
0.4
TCGA-F7-A622-01A
0 years, male, white, stage:Stage III, dead, 359 days
0.4
TCGA-HD-7754-01A
0 years, male, white, stage:Stage IVA, alive, 783 days
0.4
TCGA-CV-7424-01A
0 years, male, asian, stage:Stage IVA, dead, 453 days
0.4
TCGA-UF-A7JO-01A
0 years, female, white, stage:Stage IVA, dead, 631 days
0.4
TCGA-CN-5366-01A
0 years, male, white, stage:Stage IVA, dead, 360 days
0.4
TCGA-QK-A8Z8-01A
0 years, female, black or african american, stage:Stage IVC, dead, 171 days
0.4
TCGA-BA-6872-01A
0 years, male, white, stage:'--, dead, 384 days
0.4
TCGA-P3-A5Q5-01A
0 years, male, white, stage:Stage IVA, alive, 910 days
0.4
TCGA-CR-7385-01A
0 years, male, white, stage:'--, alive, 997 days
0.4
TCGA-BA-7269-01A
0 years, male, white, stage:Stage III, alive, 1273 days
0.4
TCGA-CV-7422-01A
0 years, female, white, stage:Stage IVA, dead, 1037 days
0.4
TCGA-CV-7440-01A
0 years, male, white, stage:Stage II, dead, 675 days
0.4
TCGA-CR-6491-01A
0 years, male, black or african american, stage:Stage IVA, alive, 693 days
0.4
TCGA-C9-A47Z-01A
0 years, female, asian, stage:Stage III, dead, 191 days
0.4
TCGA-CV-6941-01A
0 years, male, white, stage:Stage III, dead, 342 days
0.4
TCGA-BB-A5HU-01A
0 years, male, white, stage:Stage IVA, alive, 782 days
0.3
TCGA-CQ-7072-01A
0 years, male, white, stage:Stage II, alive, 2359 days
0.3
TCGA-CN-6024-01A
0 years, male, white, stage:Stage IVA, dead, 337 days
0.3
TCGA-CN-A49C-01A
0 years, male, white, stage:'--, alive, 645 days
0.3
TCGA-P3-A5Q6-01A
0 years, male, white, stage:Stage IVA, dead, 480 days
0.3
TCGA-CV-5431-01A
0 years, male, white, stage:Stage IVA, dead, 522 days
0.3
TCGA-UF-A719-01A
0 years, male, stage:Stage II, alive, 1663 days
0.3
TCGA-CQ-6228-01A
0 years, female, white, stage:Stage IVA, dead, 456 days
0.3
TCGA-CR-7390-01A
0 years, male, white, stage:Stage IVA, alive, 1508 days
0.3
TCGA-CR-6493-01A
0 years, male, black or african american, stage:Stage IVA, dead, 282 days
0.3
TCGA-CV-6933-01A
0 years, male, white, stage:Stage III, dead, 2741 days
0.3
TCGA-CN-4727-01A
0 years, male, white, stage:Stage IVA, alive, 1560 days
0.3
TCGA-BB-4225-01A
0 years, male, white, stage:'--, alive, 146 days
0.2
TCGA-QK-A6V9-01A
0 years, male, white, stage:Stage II, alive, 833 days
0.2
TCGA-CV-5435-01A
0 years, male, white, stage:Stage IVA, dead, 2319 days
0.2
TCGA-DQ-5631-01A
0 years, male, white, stage:'--, dead, 548 days
0.2
TCGA-QK-A6IH-01A
0 years, female, white, stage:Stage IVB, alive, 653 days
0.2
TCGA-CQ-5324-01A
0 years, male, white, stage:Stage III, alive, 1593 days
0.2
TCGA-BB-A5HZ-01A
0 years, male, white, stage:Stage IVA, alive, 827 days
0.2
TCGA-BA-A6D8-01A
0 years, male, black or african american, stage:Stage IVA, alive, 850 days
0.2
TCGA-CN-6988-01A
0 years, male, white, stage:Stage IVA, alive, 318 days
0.2
TCGA-CV-6953-01A
0 years, female, white, stage:Stage III, dead, 1641 days
0.2
TCGA-D6-A6ES-01A
0 years, male, white, stage:Stage IVA, alive, 389 days
0.2
TCGA-QK-A6VB-01A
0 years, male, white, stage:Stage IVA, alive, 641 days
0.2
TCGA-T2-A6X2-01A
0 years, male, white, stage:Stage III, alive, 987 days
0.2
TCGA-BB-4224-01A
0 years, male, white, stage:Stage IVA, alive, 278 days
0.2
TCGA-CV-7429-01A
0 years, male, white, stage:Stage IVA, dead, 107 days
0.2
TCGA-CR-6473-01A
0 years, male, white, stage:'--, alive, 1125 days
0.2
TCGA-UF-A7JT-01A
0 years, female, white, stage:Stage IVA, dead, 993 days
0.2
TCGA-BB-8601-01A
0 years, male, black or african american, stage:Stage III, alive, 624 days
0.2
TCGA-T3-A92N-01A
0 years, male, black or african american, stage:Stage IVA, dead, 95 days
0.2
TCGA-CN-6995-01A
0 years, male, white, stage:Stage IVA, dead, 112 days
0.1
TCGA-IQ-A6SG-01A
0 years, female, white, stage:Stage III, alive, 579 days
0.1
TCGA-UP-A6WW-01A
0 years, male, white, stage:'--, alive, 518 days
0.1
TCGA-CV-7095-01A
0 years, female, stage:Stage II, dead, 572 days
0.1
TCGA-CV-6433-01A
0 years, male, white, stage:Stage II, alive, 641 days
0.1
TCGA-CV-7253-01A
0 years, male, black or african american, stage:Stage IVA, dead, 361 days
0.1
TCGA-CV-A6K2-01A
0 years, male, white, stage:Stage IVA, dead, 317 days
0.1
TCGA-CV-5441-01A
0 years, male, white, stage:Stage IVA, alive, 2886 days
0.1
TCGA-CV-5966-01A
0 years, female, white, stage:Stage IVA, dead, 545 days
0.1
TCGA-BA-A6DL-01A
0 years, male, white, stage:'--, alive, 623 days
0.1
TCGA-TN-A7HI-01A
0 years, male, white, stage:Stage IVA, alive, 412 days
0.1
TCGA-CV-7250-01A
0 years, male, white, stage:Stage IVA, dead, 2900 days
0.1
TCGA-CV-7432-01A
0 years, male, white, stage:Stage II, dead, 2570 days
0.1
TCGA-KU-A66T-01A
0 years, female, white, stage:Stage IVA, alive, 552 days
0.1
TCGA-CV-A6JT-01A
0 years, male, white, stage:Stage II, alive, 852 days
0.1
TCGA-F7-A624-01A
0 years, male, white, stage:Stage II, alive, 378 days
0.1
TCGA-IQ-A61I-01A
0 years, male, black or african american, stage:Stage IVA, dead, 2 days
0.1
TCGA-HD-A634-01A
0 years, male, white, stage:Stage IVA, dead, 130 days
0.1
TCGA-CN-A6UY-01A
0 years, male, white, stage:Stage IVA, alive, 713 days
0.1
TCGA-P3-A6T3-01A
0 years, male, white, stage:Stage IVA, dead, 577 days
0.1
TCGA-KU-A6H7-01A
0 years, female, white, stage:Stage IVA, alive, 586 days
0.1
TCGA-RS-A6TP-01A
0 years, male, white, stage:Stage II, alive, 516 days
0.0
TCGA-CV-7437-01A
0 years, male, stage:Stage II, dead, 506 days
0.0
TCGA-CV-A6JM-01A
0 years, male, white, stage:'--, dead, 194 days
0.0
TCGA-BA-A6DA-01A
0 years, female, white, stage:Stage IVA, alive, 351 days
0.0
TCGA-CV-A45Q-01A
0 years, female, white, stage:'--, dead, 5152 days
0.0
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HEAD AND NECK SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
183
Samples
Sample ID
Sample type
nRPX
CPT0245350003
Tumor
2.4
CPT0220620003
Normal
2.1
CPT0226250004
Tumor
1.9
CPT0013250003
Normal
1.8
C3N-01758-04
Normal
1.7
CPT0256560003
Tumor
1.7
CPT0235470002
Normal
1.6
CPT0195880003
Normal
1.6
CPT0162890003
Tumor
1.5
CPT0245140003
Normal
1.5
CPT0169920003
Normal
1.5
CPT0245190003
Normal
1.4
CPT0196060003
Normal
1.4
CPT0245410003
Normal
1.4
CPT0236640003
Normal
1.3
CPT0235920003
Normal
1.3
CPT0226090003
Normal
1.3
CPT0177220003
Normal
1.2
CPT0190860003
Normal
1.1
CPT0084650004
Normal
1.1
CPT0223460003
Normal
1.1
CPT0013460003
Normal
1.1
CPT0226450003
Normal
1.1
CPT0222200003
Normal
1.1
CPT0199830003
Normal
1.0
CPT0123280003
Normal
1.0
C3N-04279-05
Normal
0.9
CPT0245130003
Tumor
0.8
CPT0196040003
Tumor
0.8
CPT0163490003
Normal
0.8
CPT0245020003
Normal
0.8
CPT0201860004
Normal
0.8
CPT0163160003
Tumor
0.8
CPT0195700003
Normal
0.7
CPT0163020003
Normal
0.7
CPT0088010003
Normal
0.7
CPT0162940003
Tumor
0.7
CPT0094580003
Normal
0.7
CPT0248350003
Normal
0.7
CPT0088080003
Normal
0.7
CPT0245560003
Normal
0.7
CPT0243140004
Normal
0.6
CPT0011320003
Normal
0.6
CPT0245460003
Normal
0.6
CPT0242000004
Normal
0.6
CPT0123190003
Normal
0.6
CPT0199890003
Normal
0.6
CPT0163530003
Tumor
0.5
CPT0195860003
Tumor
0.5
CPT0094280004
Tumor
0.5
CPT0013030003
Normal
0.4
CPT0226400003
Normal
0.4
CPT0127050003
Tumor
0.4
CPT0226270003
Normal
0.4
CPT0008930003
Tumor
0.4
CPT0236870003
Normal
0.4
CPT0177200003
Tumor
0.4
CPT0194790003
Tumor
0.4
CPT0177390003
Tumor
0.3
CPT0008960003
Normal
0.3
CPT0194260003
Normal
0.3
CPT0237150003
Normal
0.3
C3N-04276-06
Normal
0.3
CPT0177010003
Tumor
0.3
CPT0229220002
Normal
0.3
CPT0278700002
Normal
0.2
CPT0169740004
Normal
0.2
CPT0088430003
Normal
0.1
CPT0163800003
Normal
0.1
CPT0163860003
Normal
0.1
CPT0169730003
Tumor
0.1
CPT0199880003
Tumor
0.1
CPT0094420004
Tumor
0.1
CPT0244890004
Tumor
0.1
CPT0237640003
Normal
0.0
CPT0246620003
Tumor
0.0
CPT0245300003
Tumor
0.0
CPT0163170003
Normal
0.0
C3N-02693-06
Normal
0.0
CPT0163240003
Tumor
0.0
CPT0226350003
Normal
-0.1
CPT0245400003
Tumor
-0.1
CPT0245230004
Tumor
-0.1
CPT0163250003
Normal
-0.1
CPT0123260003
Tumor
-0.1
C3N-04275-05
Normal
-0.1
CPT0163430003
Normal
-0.2
CPT0177710003
Tumor
-0.2
CPT0163610003
Normal
-0.2
CPT0281470002
Normal
-0.2
CPT0244940004
Tumor
-0.2
CPT0226030003
Tumor
-0.2
CPT0024810003
Tumor
-0.2
C3N-01859-04
Normal
-0.3
CPT0194960003
Tumor
-0.3
CPT0223450003
Tumor
-0.3
CPT0123180003
Tumor
-0.3
CPT0194420003
Tumor
-0.3
CPT0243090003
Tumor
-0.3
CPT0011290003
Tumor
-0.3
CPT0245600003
Tumor
-0.3
CPT0008520008
Tumor
-0.3
CPT0163840003
Tumor
-0.3
CPT0199700003
Tumor
-0.3
CPT0222180003
Tumor
-0.4
CPT0163480003
Tumor
-0.4
CPT0226130003
Tumor
-0.4
C3N-00295-05
Normal
-0.4
CPT0245500003
Tumor
-0.4
C3N-00857-05
Normal
-0.4
CPT0237500003
Normal
-0.4
CPT0245730003
Tumor
-0.4
CPT0246540003
Tumor
-0.5
CPT0199710003
Normal
-0.5
CPT0226390003
Tumor
-0.5
CPT0094350004
Tumor
-0.5
CPT0013430003
Tumor
-0.5
CPT0245180003
Tumor
-0.5
CPT0245010003
Tumor
-0.6
CPT0163790003
Tumor
-0.6
C3N-01620-05
Normal
-0.6
CPT0008630003
Tumor
-0.6
CPT0261520003
Tumor
-0.6
CPT0245060004
Tumor
-0.6
CPT0088410003
Tumor
-0.6
CPT0194800003
Normal
-0.6
CPT0162990004
Tumor
-0.6
CPT0207870004
Tumor
-0.7
CPT0176770003
Tumor
-0.7
CPT0169640003
Tumor
-0.7
CPT0222360003
Tumor
-0.7
CPT0220610003
Tumor
-0.7
CPT0163600003
Tumor
-0.7
CPT0088060004
Tumor
-0.7
CPT0190850003
Tumor
-0.8
CPT0087820003
Tumor
-0.8
CPT0201830004
Tumor
-0.8
CPT0246670003
Tumor
-0.8
CPT0169890003
Tumor
-0.8
CPT0236620003
Tumor
-0.8
CPT0199820003
Tumor
-0.9
CPT0163650003
Tumor
-0.9
CPT0245450003
Tumor
-0.9
CPT0013000004
Tumor
-0.9
CPT0226440003
Tumor
-0.9
CPT0011130005
Tumor
-0.9
CPT0248330003
Tumor
-0.9
CPT0194250003
Tumor
-1.0
CPT0248520003
Tumor
-1.0
CPT0250310003
Tumor
-1.0
CPT0087990003
Tumor
-1.0
CPT0235460003
Tumor
-1.0
CPT0013210004
Tumor
-1.0
CPT0241980004
Tumor
-1.1
CPT0223970003
Tumor
-1.1
CPT0245550003
Tumor
-1.1
CPT0163340003
Tumor
-1.1
CPT0095040003
Tumor
-1.1
CPT0237480004
Tumor
-1.1
CPT0226340003
Tumor
-1.1
CPT0237620004
Tumor
-1.1
CPT0084630009
Tumor
-1.2
CPT0094560004
Tumor
-1.2
CPT0013130003
Tumor
-1.2
CPT0163090003
Tumor
-1.2
CPT0236850004
Tumor
-1.3
CPT0245680003
Tumor
-1.3
CPT0245630003
Tumor
-1.4
CPT0184530003
Tumor
-1.5
CPT0163740003
Tumor
-1.5
CPT0163410003
Tumor
-1.5
CPT0196210003
Tumor
-1.5
CPT0163910003
Tumor
-1.6
CPT0163720003
Normal
-1.7
CPT0246590003
Tumor
-1.7
CPT0237130004
Tumor
-1.9
CPT0235910003
Tumor
-2.2
CPT0195680003
Tumor
-2.3
CPT0094490004
Tumor
-2.3
CPT0229230003
Normal
N/A
CPT0169750003
Normal
N/A
CPT0229210003
Tumor
N/A
CPT0229190003
Tumor
N/A
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HEAD AND NECK CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
