HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:11.6 nTPM
HPA Brain:25.8 nTPM
GTEx:11.6 nTPM
FANTOM5:33.5 Scaled Tags Per Million
Pig:11.8 nTPM
Mouse:18.7 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023383
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 25.8
Sample id Sample description nTPM
Hippocampus
nTPM: 17.3
1898 Male, age 80, left hemisphere 21.7
2621 Female, age 67, right hemisphere 19.9
1911 Female, age 85, right hemisphere 16.4
2529 Female, age 94, left hemisphere 16.1
1855 Male, age 76, left hemisphere 14.9
2148 Female, age 91, left hemisphere 14.8
Dentate gyrus
nTPM: 19.6
2528 Male, age 74, both hemispheres 20.4
2010 Male, age 76, both hemispheres 19.9
2531 Female, age 67, both hemispheres 19.8
1927 Female, age 91, both hemispheres 19.7
2530 Female, age 94, left hemisphere 19.5
2246 Female, age 85, both hemispheres 18.0
Entorhinal gyrus
nTPM: 21.3
1938 Female, age 85, left hemisphere 22.6
2613 Female, age 94, left hemisphere 22.3
2764 Male, age 80, right hemisphere 22.1
1787 Male, age 76, left hemisphere 20.7
2686 Male, age 75, right hemisphere 20.1
2117 Female, age 91, right hemisphere 20.0
Hippocampus, CA1
nTPM: 20.5
2749 Male, age 80, left hemisphere 25.9
1873 Female, age 85, both hemispheres 19.9
2527 Male, age 74, both hemispheres 19.8
2045 Male, age 76, both hemispheres 18.7
2082 Female, age 91, right hemisphere 18.3
Hippocampus, CA2
nTPM: 20.0
1963 Male, age 80, left hemisphere 25.5
1892 Male, age 76, both hemispheres 23.3
2249 Male, age 74, both hemispheres 20.0
2113 Female, age 91, right hemisphere 17.3
2437 Female, age 94, left hemisphere 17.1
1940 Female, age 85, left hemisphere 16.8
Hippocampus, CA3
nTPM: 20.3
2137 Male, age 80, left hemisphere 25.6
2436 Male, age 74, both hemispheres 21.8
2620 Female, age 94, left hemisphere 20.2
1867 Male, age 76, both hemispheres 19.3
1891 Female, age 85, both hemispheres 18.4
2861 Female, age 67, both hemispheres 16.7
Parahippocampal cortex
nTPM: 22.0
1850 Male, age 80, both hemispheres 28.6
2532 Female, age 72, left hemisphere 25.9
2693 Female, age 94, both hemispheres 22.5
1990 Female, age 91, right hemisphere 22.1
2245 Female, age 91, both hemispheres 21.0
2250 Female, age 67, right hemisphere 20.8
2018 Male, age 76, both hemispheres 20.7
2622 Female, age 67, right hemisphere 20.1
1933 Female, age 85, both hemispheres 19.3
2692 Male, age 74, both hemispheres 18.8
Perirhinal gyrus
nTPM: 25.8
1841 Female, age 85, right hemisphere 27.1
1794 Male, age 80, right hemisphere 26.7
1847 Female, age 91, left hemisphere 25.9
2521 Female, age 94, right hemisphere 24.6
2848 Male, age 76, right hemisphere 24.4
Subiculum
nTPM: 18.8
1901 Male, age 80, both hemispheres 21.4
1977 Female, age 85, both hemispheres 21.1
2729 Female, age 91, right hemisphere 18.9
2042 Male, age 76, both hemispheres 18.0
2438 Female, age 94, left hemisphere 17.3
2619 Male, age 74, both hemispheres 15.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.6
Samples: 197

Max nTPM: 25.6
Min nTPM: 5.0
Std nTPM: 3.5
Median nTPM: 10.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 25.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 21.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 21.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 20.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 20.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 20.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 20.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 19.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 19.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 19.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 19.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 33.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.5
FF:10169-103B7 60 years, female 41.5
FF:10153-102I9 76 years, female 25.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 11.8
Pig sample Sample description nTPM
Subiculum
nTPM: 11.9
Samples: 4

Max nTPM: 12.8
Min nTPM: 10.5
Sample A Female 10.5
Sample B Female 12.0
Sample C Male 12.1
Sample D Male 12.8
Dorsal hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 11.9
Min nTPM: 11.0
Sample A Female 11.6
Sample B Female 11.4
Sample C Male 11.0
Sample D Male 11.9
Entorhinal cortex
nTPM: 10.9
Samples: 4

Max nTPM: 11.5
Min nTPM: 10.2
Sample A Female 10.2
Sample B Female 11.1
Sample C Male 10.9
Sample D Male 11.5
Ventral hippocampus
nTPM: 10.9
Samples: 4

Max nTPM: 11.5
Min nTPM: 9.5
Sample A Female 11.0
Sample B Female 11.5
Sample C Male 9.5
Sample D Male 11.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 18.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 21.6
Min nTPM: 14.7
Sample A Male 20.2
Sample B Male 21.6
Sample C Female 18.2
Sample D Female 14.7
Hippocampal formation
nTPM: 18.7
Samples: 4

Max nTPM: 22.8
Min nTPM: 17.1
Sample A Male 22.8
Sample B Male 17.7
Sample C Female 17.1
Sample D Female 17.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
70474905 Antisense, RP_050623_01_C12, Mouse strain C57BL/6J (56 days, male) 0.5

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