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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RBL2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
35.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
28.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
26.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
25.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
24.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
24.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
23.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
23.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
21.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
20.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
20.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
20.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
20.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
19.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
19.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
18.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
18.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
18.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
17.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
17.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
17.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
16.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
16.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
15.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
15.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
15.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
15.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
15.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
14.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
14.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
14.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
14.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
13.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
13.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
13.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
13.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
13.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
13.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
12.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
12.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
12.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
12.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
12.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
12.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
12.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
12.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
12.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
11.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
11.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
11.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
11.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
10.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
10.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
10.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
10.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
10.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
10.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
10.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
10.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
10.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
10.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
10.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
10.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
10.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
10.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
10.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
9.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
9.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
9.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
9.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
9.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
9.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
9.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
9.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
9.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
9.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
9.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
9.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
9.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
9.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
8.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
8.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
8.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
8.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
8.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
8.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
8.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
7.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
7.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
7.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
7.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
7.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
7.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
7.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
7.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
7.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
7.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
7.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
7.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
7.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
7.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
7.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
7.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
7.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
7.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
7.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
7.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
6.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
6.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
6.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
6.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
6.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
6.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
6.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
6.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
6.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
6.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
6.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
6.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
6.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
6.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
6.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
5.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
5.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
5.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
5.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
5.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
5.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
5.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
5.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
5.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
5.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
5.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
5.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
5.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
5.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
5.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
4.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
4.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
4.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
4.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
4.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
4.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
4.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
4.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
4.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
4.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
4.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
4.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
4.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
4.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
3.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
3.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
3.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
3.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
3.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
3.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
3.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
3.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
3.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
3.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
3.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
3.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
3.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
3.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
3.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
3.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
3.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
3.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
3.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
3.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
3.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
3.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
3.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
3.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
3.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
3.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
3.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
3.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
3.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
2.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
2.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
2.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
2.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
2.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
2.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
2.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
2.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
2.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
2.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
2.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
2.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
2.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
2.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
2.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
2.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
2.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
2.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
2.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
2.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
2.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
2.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
2.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
2.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
2.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
1.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
1.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
1.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
1.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
1.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
1.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
1.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
1.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
1.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
1.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
1.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
0.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
0.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
0.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
0.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
0.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
0.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
0.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
0.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
0.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
0.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
0.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
0.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
0.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
0.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
0.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
0.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
0.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
0.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
0.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
0.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
0.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
0.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
0.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
0.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
0.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
0.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
0.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
0.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
0.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
0.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
0.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
0.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
0.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
0.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
0.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
0.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
0.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
0.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
0.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
0.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
0.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
0.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
0.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
0.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
0.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
0.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
0.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
0.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
0.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
0.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
0.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
0.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
0.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
0.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
0.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
0.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
0.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
0.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
0.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
0.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
0.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
0.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
0.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
0.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
0.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RBL2 is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.7
Number of samples
231
Samples
Sample
Description
TPM
DO45105
0 years, male, NA, stage:1, alive, 1680 days
45.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
41.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
39.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
38.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
38.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
37.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
37.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
37.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
36.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
36.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
36.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
35.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
35.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
35.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
35.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
34.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
34.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
34.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
34.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
34.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
33.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
33.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
32.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
32.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
32.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
32.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
31.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
31.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
31.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
31.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
31.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
31.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
31.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
31.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
30.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
30.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
30.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
30.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
30.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
30.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
30.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
29.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
29.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
29.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
29.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
29.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
29.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
28.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
28.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
28.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
28.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
28.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
28.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
28.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
27.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
27.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
27.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
27.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
27.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
26.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
26.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
26.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
26.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
26.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
26.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
26.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
25.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
25.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
25.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
25.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
25.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
25.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
25.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
24.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
24.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
24.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
24.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
24.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
24.5
DO50793
0 years, male, NA, stage:4, alive, 540 days
24.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
24.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
23.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
23.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
23.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
23.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
23.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
22.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
22.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
22.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
22.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
22.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
22.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
22.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
22.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
22.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
22.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
22.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
21.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
21.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
21.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
21.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
21.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
21.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
21.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
21.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
20.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
20.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
20.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
20.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
20.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
20.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
20.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
20.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
20.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
19.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
19.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
19.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
19.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
19.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
19.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
19.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
19.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
19.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
19.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
19.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
19.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
19.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
19.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
18.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
18.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
18.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
18.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
18.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
18.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
18.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
17.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
17.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
17.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
17.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
17.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
17.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
17.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
17.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
17.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
16.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
16.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
16.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
16.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
16.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
16.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
16.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
16.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
16.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
16.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
16.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
15.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
15.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
15.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
15.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
15.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
15.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
15.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
15.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
14.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
14.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
14.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
14.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
14.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
14.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
14.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
14.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
14.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
13.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
13.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
13.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
13.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
13.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
13.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
13.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
13.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
13.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
12.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
12.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
12.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
12.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
12.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
12.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
12.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
12.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
12.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
12.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
11.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
11.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
11.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
11.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
11.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
11.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
11.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
11.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
10.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
10.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
10.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
10.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
10.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
10.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
10.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
9.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
9.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
9.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
9.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
9.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
9.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
9.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
8.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
8.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
8.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
8.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
8.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
8.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
7.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
7.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
7.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
6.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
6.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
6.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
6.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
5.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
5.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
4.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
3.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
2.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
192
Normal
0.7
956
Normal
0.6
354
Normal
0.6
814
Normal
0.5
393
Tumor
0.5
396
Normal
0.5
672
Normal
0.5
352
Normal
0.5
277
Tumor
0.5
487
Tumor
0.5
358
Normal
0.5
741
Tumor
0.5
813
Tumor
0.5
342
Normal
0.4
394
Normal
0.4
112
Tumor
0.4
977
Tumor
0.4
383
Tumor
0.4
328
Normal
0.4
464
Normal
0.4
445
Tumor
0.4
478
Normal
0.4
452
Normal
0.3
388
Normal
0.3
392
Normal
0.3
185
Tumor
0.3
635
Tumor
0.3
436
Normal
0.3
467
Tumor
0.3
975
Tumor
0.3
497
Tumor
0.3
451
Tumor
0.3
344
Normal
0.3
217
Tumor
0.3
432
Normal
0.3
195
Tumor
0.3
444
Normal
0.3
778
Normal
0.3
433
Tumor
0.3
526
Normal
0.3
456
Normal
0.3
482
Normal
0.3
386
Normal
0.3
984
Normal
0.3
861
Tumor
0.3
434
Normal
0.3
616
Normal
0.3
376
Normal
0.3
188
Normal
0.3
723
Tumor
0.3
468
Normal
0.3
455
Tumor
0.3
353
Tumor
0.3
785
Tumor
0.3
863
Tumor
0.3
463
Tumor
0.3
963
Tumor
0.3
981
Tumor
0.3
461
Tumor
0.3
161
Tumor
0.2
867
Tumor
0.2
332
Normal
0.2
666
Normal
0.2
368
Normal
0.2
366
Normal
0.2
298
Normal
0.2
146
Normal
0.2
976
Normal
0.2
912
Normal
0.2
742
Normal
0.2
1014
Normal
0.2
777
Tumor
0.2
1041
Tumor
0.2
744
Normal
0.2
356
Normal
0.2
221
Tumor
0.2
351
Tumor
0.2
481
Tumor
0.2
472
Normal
0.2
738
Normal
0.2
697
Tumor
0.2
716
Normal
0.2
364
Normal
0.2
516
Normal
0.2
937
Tumor
0.2
127
Tumor
0.2
443
Tumor
0.2
746
Normal
0.2
186
Normal
0.2
365
Tumor
0.2
425
Tumor
0.2
416
Normal
0.2
873
Tumor
0.2
172
Normal
0.2
312
Normal
0.2
786
Normal
0.2
755
Tumor
0.2
232
Normal
0.2
484
Normal
0.2
715
Tumor
0.2
1027
Tumor
0.2
1031
Tumor
0.2
874
Normal
0.2
923
Tumor
0.2
664
Normal
0.2
123
Tumor
0.2
466
Normal
0.2
268
Normal
0.2
955
Tumor
0.2
648
Normal
0.2
492
Normal
0.2
642
Normal
0.2
636
Normal
0.2
882
Normal
0.2
714
Normal
0.2
147
Tumor
0.2
213
Tumor
0.2
375
Tumor
0.2
517
Tumor
0.2
421
Tumor
0.2
756
Normal
0.2
1045
Tumor
0.2
536
Normal
0.1
113
Tumor
0.1
686
Normal
0.1
724
Normal
0.1
135
Tumor
0.1
141
Tumor
0.1
428
Normal
0.1
921
Tumor
0.1
554
Normal
0.1
446
Normal
0.1
224
Normal
0.1
187
Tumor
0.1
387
Tumor
0.1
462
Normal
0.1
474
Normal
0.1
171
Tumor
0.1
978
Normal
0.1
665
Tumor
0.1
982
Normal
0.1
913
Tumor
0.1
341
Tumor
0.1
535
Tumor
0.1
695
Tumor
0.1
1015
Tumor
0.1
884
Normal
0.1
862
Normal
0.1
414
Normal
0.1
391
Tumor
0.1
261
Tumor
0.1
395
Tumor
0.1
131
Tumor
0.1
696
Normal
0.1
1046
Normal
0.1
914
Normal
0.1
918
Normal
0.1
628
Normal
0.1
574
Normal
0.1
488
Normal
0.1
384
Normal
0.1
524
Normal
0.1
641
Tumor
0.1
964
Normal
0.1
615
Tumor
0.1
284
Normal
0.1
662
Normal
0.1
191
Tumor
0.1
412
Normal
0.1
1044
Normal
0.1
498
Normal
0.1
938
Normal
0.1
278
Normal
0.1
868
Normal
0.1
142
Normal
0.1
924
Normal
0.1
958
Normal
0.1
491
Tumor
0.1
422
Normal
0.1
272
Normal
0.1
426
Normal
0.1
145
Tumor
0.1
314
Normal
0.1
111
Normal
0.1
231
Tumor
0.1
514
Normal
0.1
427
Tumor
0.1
857
Tumor
0.1
218
Normal
0.1
647
Tumor
0.1
361
Tumor
0.1
878
Normal
0.1
721
Tumor
0.1
448
Normal
0.1
211
Tumor
0.1
124
Normal
0.1
823
Tumor
0.1
728
Normal
0.1
362
Normal
0.1
471
Tumor
0.1
663
Tumor
0.1
916
Normal
0.1
518
Normal
0.1
864
Normal
0.1
865
Tumor
0.0
698
Normal
0.0
737
Tumor
0.0
162
Normal
0.0
1025
Tumor
0.0
267
Tumor
0.0
534
Normal
0.0
685
Tumor
0.0
431
Tumor
0.0
196
Normal
0.0
951
Tumor
0.0
132
Normal
0.0
966
Normal
0.0
271
Tumor
0.0
922
Normal
0.0
564
Normal
0.0
866
Normal
0.0
572
Normal
0.0
713
Tumor
0.0
222
Normal
0.0
618
Normal
0.0
1042
Normal
0.0
527
Tumor
0.0
297
Tumor
0.0
258
Normal
0.0
967
Tumor
0.0
423
Tumor
0.0
877
Tumor
0.0
571
Tumor
0.0
968
Normal
0.0
546
Normal
0.0
331
Tumor
0.0
494
Normal
0.0
513
Tumor
0.0
286
Normal
0.0
538
Normal
0.0
545
Tumor
0.0
138
Normal
0.0
816
Normal
0.0
533
Tumor
0.0
415
Tumor
0.0
424
Normal
0.0
671
Tumor
0.0
411
Tumor
0.0
881
Tumor
0.0
228
Normal
0.0
435
Tumor
0.0
413
Tumor
0.0
447
Tumor
0.0
1016
Normal
0.0
943
Tumor
0.0
1028
Normal
0.0
262
Normal
0.0
745
Tumor
0.0
311
Tumor
0.0
148
Normal
0.0
136
Normal
0.0
858
Normal
0.0
1026
Normal
0.0
563
Tumor
0.0
126
Normal
-0.1
952
Normal
-0.1
957
Tumor
-0.1
125
Tumor
-0.1
852
Normal
-0.1
627
Tumor
-0.1
883
Tumor
-0.1
367
Tumor
-0.1
944
Normal
-0.1
128
Normal
-0.1
477
Tumor
-0.1
917
Tumor
-0.1
553
Tumor
-0.1
214
Normal
-0.1
727
Tumor
-0.1
515
Tumor
-0.1
818
Normal
-0.1
385
Tumor
-0.1
911
Tumor
-0.1
722
Normal
-0.1
528
Normal
-0.1
824
Normal
-0.1
568
Normal
-0.1
965
Tumor
-0.1
815
Tumor
-0.1
283
Tumor
-0.1
915
Tumor
-0.1
327
Tumor
-0.1
493
Tumor
-0.1
817
Tumor
-0.1
954
Normal
-0.1
137
Tumor
-0.2
743
Tumor
-0.2
1021
Tumor
-0.2
558
Normal
-0.2
212
Normal
-0.2
114
Normal
-0.2
926
Normal
-0.2
1022
Normal
-0.2
1032
Normal
-0.2
1043
Tumor
-0.2
483
Tumor
-0.2
223
Tumor
-0.2
343
Tumor
-0.2
617
Tumor
-0.2
525
Tumor
-0.2
1013
Tumor
-0.2
465
Tumor
-0.2
661
Tumor
-0.2
983
Tumor
-0.2
257
Tumor
-0.3
925
Tumor
-0.3
355
Tumor
-0.3
363
Tumor
-0.3
473
Tumor
-0.3
851
Tumor
-0.3
557
Tumor
-0.3
285
Tumor
-0.4
573
Tumor
-0.5
567
Tumor
-0.5
227
Tumor
-0.5
523
Tumor
-0.5
537
Tumor
-0.6
313
Tumor
-0.7
357
Tumor
-1.0
953
Tumor
-1.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
