HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.7 nTPM
HPA Brain:15.0 nTPM
GTEx:11.7 nTPM
FANTOM5:31.5 Scaled Tags Per Million
Pig:23.1 nTPM
Mouse:23.6 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 15.0
Sample id Sample description nTPM
Hippocampus
nTPM: 13.2
2529 Female, age 94, left hemisphere 14.8
1898 Male, age 80, left hemisphere 14.1
2621 Female, age 67, right hemisphere 13.0
1855 Male, age 76, left hemisphere 12.7
1911 Female, age 85, right hemisphere 12.4
2148 Female, age 91, left hemisphere 11.9
Dentate gyrus
nTPM: 13.9
2010 Male, age 76, both hemispheres 16.8
2528 Male, age 74, both hemispheres 16.1
2530 Female, age 94, left hemisphere 13.7
1927 Female, age 91, both hemispheres 13.0
2531 Female, age 67, both hemispheres 12.3
2246 Female, age 85, both hemispheres 11.3
Entorhinal gyrus
nTPM: 11.9
2117 Female, age 91, right hemisphere 14.3
1787 Male, age 76, left hemisphere 13.7
2686 Male, age 75, right hemisphere 11.9
2764 Male, age 80, right hemisphere 11.5
2613 Female, age 94, left hemisphere 10.2
1938 Female, age 85, left hemisphere 9.6
Hippocampus, CA1
nTPM: 12.9
2527 Male, age 74, both hemispheres 15.6
1873 Female, age 85, both hemispheres 14.6
2045 Male, age 76, both hemispheres 13.7
2749 Male, age 80, left hemisphere 10.7
2082 Female, age 91, right hemisphere 9.7
Hippocampus, CA2
nTPM: 14.8
1963 Male, age 80, left hemisphere 17.8
1892 Male, age 76, both hemispheres 15.1
2437 Female, age 94, left hemisphere 15.0
2113 Female, age 91, right hemisphere 14.6
2249 Male, age 74, both hemispheres 14.5
1940 Female, age 85, left hemisphere 11.8
Hippocampus, CA3
nTPM: 15.0
1867 Male, age 76, both hemispheres 16.5
1891 Female, age 85, both hemispheres 16.3
2436 Male, age 74, both hemispheres 15.4
2861 Female, age 67, both hemispheres 14.9
2620 Female, age 94, left hemisphere 14.0
2137 Male, age 80, left hemisphere 13.0
Parahippocampal cortex
nTPM: 12.6
2622 Female, age 67, right hemisphere 14.6
2692 Male, age 74, both hemispheres 14.6
2018 Male, age 76, both hemispheres 14.5
1990 Female, age 91, right hemisphere 13.6
1850 Male, age 80, both hemispheres 12.7
2245 Female, age 91, both hemispheres 12.3
2532 Female, age 72, left hemisphere 11.7
2693 Female, age 94, both hemispheres 11.5
2250 Female, age 67, right hemisphere 11.3
1933 Female, age 85, both hemispheres 8.7
Perirhinal gyrus
nTPM: 9.6
1847 Female, age 91, left hemisphere 10.8
2521 Female, age 94, right hemisphere 9.7
1841 Female, age 85, right hemisphere 9.5
2848 Male, age 76, right hemisphere 9.5
1794 Male, age 80, right hemisphere 8.6
Subiculum
nTPM: 13.7
2438 Female, age 94, left hemisphere 15.1
2729 Female, age 91, right hemisphere 14.7
2619 Male, age 74, both hemispheres 14.6
2042 Male, age 76, both hemispheres 14.5
1901 Male, age 80, both hemispheres 13.4
1977 Female, age 85, both hemispheres 10.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.7
Samples: 197

Max nTPM: 21.0
Min nTPM: 7.6
Std nTPM: 1.9
Median nTPM: 11.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 21.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 20.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 19.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 16.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 15.7
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 15.5
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 15.1
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 14.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 14.8
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 14.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 14.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 31.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.5
FF:10153-102I9 76 years, female 35.1
FF:10169-103B7 60 years, female 28.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 23.1
Pig sample Sample description nTPM
Subiculum
nTPM: 21.2
Samples: 4

Max nTPM: 22.7
Min nTPM: 20.5
Sample A Female 22.7
Sample B Female 20.7
Sample C Male 20.5
Sample D Male 20.7
Dorsal hippocampus
nTPM: 23.1
Samples: 4

Max nTPM: 27.5
Min nTPM: 21.1
Sample A Female 27.5
Sample B Female 21.1
Sample C Male 21.9
Sample D Male 21.8
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 23.2
Min nTPM: 17.9
Sample A Female 23.2
Sample B Female 17.9
Sample C Male 19.0
Sample D Male 22.2
Ventral hippocampus
nTPM: 22.3
Samples: 4

Max nTPM: 26.2
Min nTPM: 19.8
Sample A Female 26.2
Sample B Female 19.8
Sample C Male 21.2
Sample D Male 21.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 23.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.8
Samples: 4

Max nTPM: 24.9
Min nTPM: 20.9
Sample A Male 21.4
Sample B Male 23.8
Sample C Female 24.9
Sample D Female 20.9
Hippocampal formation
nTPM: 23.6
Samples: 4

Max nTPM: 24.5
Min nTPM: 22.2
Sample A Male 24.3
Sample B Male 23.3
Sample C Female 22.2
Sample D Female 24.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
68638077 Antisense, RP_050126_02_B09, Mouse strain C57BL/6J (56 days, male) 0.9

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