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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FBXO31 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
89.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
72.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
58.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
58.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
52.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
51.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
48.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
45.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
45.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
42.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
42.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
40.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
36.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
36.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
35.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
35.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
34.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
33.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
32.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
32.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
32.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
31.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
31.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
30.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
29.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
28.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
28.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
28.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
28.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
28.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
27.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
27.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
26.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
24.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
24.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
22.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
22.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
22.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
21.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
21.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
21.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
20.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
20.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
19.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
19.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
19.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
18.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
17.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
16.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
16.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
16.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
16.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
15.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
15.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
15.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
15.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
15.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
14.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
14.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
14.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
14.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
14.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
13.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
12.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
12.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
12.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
12.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
12.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
11.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
11.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
11.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
11.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
11.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
11.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
11.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
11.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
10.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
10.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
10.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
10.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
10.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
10.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
9.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
9.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
9.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
9.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
9.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
8.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
8.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
8.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
8.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
8.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
8.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
8.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
8.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
8.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
8.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
8.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
8.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
8.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
8.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
8.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
7.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
7.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
7.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
7.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
7.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
7.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
7.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
7.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
7.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
7.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
7.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
7.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
7.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
7.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
7.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
7.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
7.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
7.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
7.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
7.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
7.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
7.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
7.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
7.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
7.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
7.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
7.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
7.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
6.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
6.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
6.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
6.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
6.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
6.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
6.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
6.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
6.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
6.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
6.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
6.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
6.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
6.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
6.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
6.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
6.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
6.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
6.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
6.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
6.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
6.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
6.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
6.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
6.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
5.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
5.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
5.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
5.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
5.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
5.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
5.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
5.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
5.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
5.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
5.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
5.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
5.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
5.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
5.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
5.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
5.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
5.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
4.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
4.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
4.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
4.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
4.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
4.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
4.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
4.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
4.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
4.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
4.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
4.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
4.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
4.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
4.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
4.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
4.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
4.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
4.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
4.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
4.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
4.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
4.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
4.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
4.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
4.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
4.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
4.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
4.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
4.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
4.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
4.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
4.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
4.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
4.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
4.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
3.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
3.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
3.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
3.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
3.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
3.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
3.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
3.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
3.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
3.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
3.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
3.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
3.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
3.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
3.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
3.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
3.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
3.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
3.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
3.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
3.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
3.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
3.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
3.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
3.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
3.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
3.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
3.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
3.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
2.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
2.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
2.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
2.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
2.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
2.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
2.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
2.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
2.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
2.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
2.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
2.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
2.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
2.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
2.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
2.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
2.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
2.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
2.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
2.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
2.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
2.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
2.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
2.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
2.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
2.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
2.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
2.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
2.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
1.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
1.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
1.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
1.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
1.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
1.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
1.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
1.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
1.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
0.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FBXO31 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.2
Number of samples
231
Samples
Sample
Description
TPM
DO45281
0 years, male, NA, stage:4, alive, 750 days
158.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
144.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
116.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
116.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
101.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
101.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
97.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
91.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
91.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
89.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
84.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
84.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
76.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
76.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
72.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
68.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
67.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
65.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
64.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
63.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
62.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
61.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
56.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
56.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
55.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
55.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
54.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
53.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
52.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
51.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
47.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
47.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
46.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
43.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
42.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
42.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
42.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
41.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
39.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
39.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
38.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
38.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
37.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
37.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
36.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
35.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
35.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
35.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
34.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
33.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
33.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
31.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
31.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
30.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
30.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
29.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
29.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
28.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
28.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
28.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
27.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
27.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
27.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
25.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
25.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
24.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
24.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
23.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
23.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
22.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
22.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
22.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
22.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
21.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
21.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
21.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
21.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
21.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
20.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
20.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
20.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
20.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
20.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
20.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
20.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
20.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
19.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
19.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
19.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
18.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
18.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
18.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
18.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
18.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
18.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
17.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
17.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
17.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
17.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
17.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
16.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
16.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
16.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
16.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
16.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
16.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
16.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
15.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
15.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
15.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
14.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
14.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
14.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
14.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
14.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
14.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
13.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
13.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
13.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
13.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
13.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
13.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
13.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
13.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
13.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
13.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
13.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
12.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
12.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
12.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
12.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
12.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
12.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
12.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
12.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
12.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
11.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
11.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
11.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
11.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
11.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
11.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
11.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
11.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
11.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
11.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
11.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
11.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
10.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
10.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
10.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
10.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
10.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
10.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
10.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
10.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
10.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
10.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
9.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
9.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
9.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
9.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
9.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
9.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
9.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
9.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
9.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
9.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
8.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
8.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
8.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
8.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
8.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
8.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
8.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
8.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
8.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
8.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
8.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
8.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
8.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
8.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
8.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
8.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
8.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
7.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
7.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
7.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
7.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
7.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
7.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
7.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
7.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
7.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
7.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
6.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
6.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
6.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
6.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
6.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
6.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
6.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
6.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
6.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
6.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
6.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
6.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
6.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
6.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
5.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
5.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
5.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
5.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
5.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
5.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
5.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
5.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
5.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
4.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
4.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
4.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
4.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
4.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
4.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
4.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
3.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
3.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
1041
Tumor
2.4
351
Tumor
1.7
965
Tumor
1.5
911
Tumor
1.5
715
Tumor
1.4
141
Tumor
1.2
861
Tumor
1.2
867
Tumor
1.2
685
Tumor
1.2
481
Tumor
1.1
136
Normal
1.1
146
Normal
1.1
724
Normal
1.1
142
Normal
1.0
353
Tumor
1.0
354
Normal
1.0
493
Tumor
1.0
268
Normal
1.0
473
Tumor
0.9
618
Normal
0.9
1032
Normal
0.9
231
Tumor
0.9
137
Tumor
0.9
483
Tumor
0.8
478
Normal
0.8
915
Tumor
0.8
138
Normal
0.8
352
Normal
0.8
641
Tumor
0.8
214
Normal
0.7
877
Tumor
0.7
617
Tumor
0.7
145
Tumor
0.7
261
Tumor
0.7
628
Normal
0.7
916
Normal
0.7
865
Tumor
0.7
132
Normal
0.6
1022
Normal
0.6
1026
Normal
0.6
162
Normal
0.6
222
Normal
0.6
1031
Tumor
0.6
1028
Normal
0.6
958
Normal
0.6
727
Tumor
0.6
858
Normal
0.6
976
Normal
0.6
918
Normal
0.6
186
Normal
0.6
135
Tumor
0.6
862
Normal
0.6
873
Tumor
0.6
344
Normal
0.5
881
Tumor
0.5
882
Normal
0.5
755
Tumor
0.5
131
Tumor
0.5
257
Tumor
0.5
342
Normal
0.5
884
Normal
0.5
218
Normal
0.5
148
Normal
0.5
627
Tumor
0.5
878
Normal
0.5
721
Tumor
0.5
172
Normal
0.5
212
Normal
0.5
912
Normal
0.5
883
Tumor
0.5
951
Tumor
0.4
492
Normal
0.4
728
Normal
0.4
262
Normal
0.4
815
Tumor
0.4
868
Normal
0.4
913
Tumor
0.4
738
Normal
0.4
482
Normal
0.4
285
Tumor
0.4
267
Tumor
0.4
341
Tumor
0.4
484
Normal
0.4
272
Normal
0.4
211
Tumor
0.4
498
Normal
0.4
188
Normal
0.4
642
Normal
0.4
196
Normal
0.4
975
Tumor
0.3
914
Normal
0.3
938
Normal
0.3
756
Normal
0.3
744
Normal
0.3
217
Tumor
0.3
472
Normal
0.3
963
Tumor
0.3
232
Normal
0.3
924
Normal
0.3
271
Tumor
0.3
395
Tumor
0.3
874
Normal
0.3
636
Normal
0.3
723
Tumor
0.3
955
Tumor
0.3
742
Normal
0.3
462
Normal
0.3
696
Normal
0.2
221
Tumor
0.2
195
Tumor
0.2
474
Normal
0.2
778
Normal
0.2
357
Tumor
0.2
1042
Normal
0.2
857
Tumor
0.2
227
Tumor
0.2
864
Normal
0.2
471
Tumor
0.2
716
Normal
0.2
954
Normal
0.2
713
Tumor
0.2
824
Normal
0.2
686
Normal
0.2
852
Normal
0.2
258
Normal
0.2
968
Normal
0.2
477
Tumor
0.2
741
Tumor
0.2
786
Normal
0.2
487
Tumor
0.2
956
Normal
0.2
966
Normal
0.2
818
Normal
0.2
191
Tumor
0.2
714
Normal
0.2
386
Normal
0.2
488
Normal
0.2
192
Normal
0.1
461
Tumor
0.1
816
Normal
0.1
1027
Tumor
0.1
743
Tumor
0.1
943
Tumor
0.1
964
Normal
0.1
161
Tumor
0.0
497
Tumor
0.0
228
Normal
0.0
385
Tumor
0.0
616
Normal
0.0
952
Normal
0.0
1025
Tumor
0.0
746
Normal
0.0
823
Tumor
0.0
866
Normal
0.0
635
Tumor
0.0
284
Normal
0.0
851
Tumor
0.0
171
Tumor
-0.1
494
Normal
-0.1
925
Tumor
-0.1
695
Tumor
-0.1
722
Normal
-0.1
1021
Tumor
-0.1
491
Tumor
-0.1
286
Normal
-0.1
944
Normal
-0.2
213
Tumor
-0.2
814
Normal
-0.2
223
Tumor
-0.2
396
Normal
-0.2
777
Tumor
-0.2
224
Normal
-0.2
358
Normal
-0.2
813
Tumor
-0.3
185
Tumor
-0.3
957
Tumor
-0.3
187
Tumor
-0.3
391
Tumor
-0.3
392
Normal
-0.3
785
Tumor
-0.4
388
Normal
-0.4
387
Tumor
-0.4
817
Tumor
-0.4
923
Tumor
-0.4
394
Normal
-0.4
926
Normal
-0.4
615
Tumor
-0.5
921
Tumor
-0.5
147
Tumor
-0.5
917
Tumor
-0.5
283
Tumor
-0.6
737
Tumor
-0.6
393
Tumor
-0.6
863
Tumor
-0.7
343
Tumor
-0.7
967
Tumor
-1.0
937
Tumor
-1.1
745
Tumor
-1.3
546
Normal
-1.4
538
Normal
-1.4
554
Normal
-1.5
953
Tumor
-1.7
534
Normal
-1.7
528
Normal
-1.7
553
Tumor
-2.1
545
Tumor
-2.3
537
Tumor
-2.5
527
Tumor
-3.1
533
Tumor
-3.3
922
Normal
-3.4
111
Normal
N/A
112
Tumor
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
361
Tumor
N/A
362
Normal
N/A
363
Tumor
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
125
Tumor
N/A
367
Tumor
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
383
Tumor
N/A
384
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
1013
Tumor
N/A
1044
Normal
N/A
1043
Tumor
N/A
297
Tumor
N/A
298
Normal
N/A
977
Tumor
N/A
978
Normal
N/A
981
Tumor
N/A
982
Normal
N/A
983
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
1045
Tumor
N/A
513
Tumor
N/A
514
Normal
N/A
515
Tumor
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
648
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
413
Tumor
N/A
414
Normal
N/A
535
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
416
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
423
Tumor
N/A
665
Tumor
N/A
424
Normal
N/A
666
Normal
N/A
425
Tumor
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
312
Normal
N/A
433
Tumor
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
444
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
455
Tumor
N/A
697
Tumor
N/A
456
Normal
N/A
698
Normal
N/A
463
Tumor
N/A
464
Normal
N/A
465
Tumor
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
