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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ESRP2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
78.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
53.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
49.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
44.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
43.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
40.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
38.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
38.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
35.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
31.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
30.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
30.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
29.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
29.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
29.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
29.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
29.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
29.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
28.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
27.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
27.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
27.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
27.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
26.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
25.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
25.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
25.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
25.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
25.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
25.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
25.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
24.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
24.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
24.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
24.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
23.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
23.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
23.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
23.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
22.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
22.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
22.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
22.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
22.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
22.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
22.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
21.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
21.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
21.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
21.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
20.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
20.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
20.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
20.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
20.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
20.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
20.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
20.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
19.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
19.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
19.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
19.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
19.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
19.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
19.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
19.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
19.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
19.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
19.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
18.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
18.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
18.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
18.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
18.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
17.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
17.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
17.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
17.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
17.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
17.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
17.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
16.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
16.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
16.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
16.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
16.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
16.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
16.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
16.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
16.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
15.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
15.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
15.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
15.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
15.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
15.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
15.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
15.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
15.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
15.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
14.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
14.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
14.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
14.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
14.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
14.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
14.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
14.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
14.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
14.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
14.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
14.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
14.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
13.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
13.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
13.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
13.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
13.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
13.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
13.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
13.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
12.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
12.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
12.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
12.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
12.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
12.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
12.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
12.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
12.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
12.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
12.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
12.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
12.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
12.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
12.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
12.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
12.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
12.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
12.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
11.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
11.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
11.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
11.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
11.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
11.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
11.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
11.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
11.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
11.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
11.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
10.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
10.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
10.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
10.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
10.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
10.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
10.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
10.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
10.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
10.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
10.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
10.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
10.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
10.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
10.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
10.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
10.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
9.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
9.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
9.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
9.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
9.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
9.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
9.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
9.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
9.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
9.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
9.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
9.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
9.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
9.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
9.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
9.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
9.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
9.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
9.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
8.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
8.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
8.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
8.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
8.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
8.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
8.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
8.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
8.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
8.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
8.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
8.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
8.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
8.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
8.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
7.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
7.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
7.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
7.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
7.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
7.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
7.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
7.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
7.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
7.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
7.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
7.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
7.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
7.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
7.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
7.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
7.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
7.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
7.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
7.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
7.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
7.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
7.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
7.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
7.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
7.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
6.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
6.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
6.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
6.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
6.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
6.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
6.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
6.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
6.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
6.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
6.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
6.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
6.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
6.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
6.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
6.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
6.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
6.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
6.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
6.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
5.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
5.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
5.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
5.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
5.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
5.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
5.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
5.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
5.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
5.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
5.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
5.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
5.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
5.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
5.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
5.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
5.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
5.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
5.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
5.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
5.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
4.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
4.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
4.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
4.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
4.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
4.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
4.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
4.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
4.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
4.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
4.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
4.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
4.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
4.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
4.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
4.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
3.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
3.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
3.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
3.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
3.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
3.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
3.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
3.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
3.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
3.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
3.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
3.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
3.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
3.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
2.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
1.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
1.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
1.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
1.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
0.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ESRP2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.3
Number of samples
231
Samples
Sample
Description
TPM
DO45107
0 years, female, NA, stage:2, alive, 1710 days
62.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
54.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
53.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
52.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
50.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
49.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
43.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
43.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
41.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
41.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
40.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
39.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
39.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
37.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
35.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
34.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
34.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
33.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
32.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
32.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
31.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
31.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
31.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
31.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
30.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
30.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
30.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
29.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
29.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
29.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
28.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
28.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
28.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
27.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
27.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
27.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
27.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
26.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
26.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
26.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
25.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
25.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
25.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
24.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
24.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
24.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
24.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
24.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
24.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
24.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
24.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
23.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
22.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
22.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
22.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
22.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
22.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
22.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
22.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
22.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
21.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
21.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
21.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
21.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
21.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
21.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
21.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
21.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
21.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
20.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
20.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
20.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
20.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
20.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
20.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
20.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
20.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
20.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
20.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
20.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
20.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
20.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
20.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
20.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
19.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
19.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
19.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
19.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
19.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
19.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
19.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
19.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
19.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
19.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
18.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
18.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
18.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
18.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
18.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
18.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
18.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
18.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
18.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
18.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
17.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
17.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
17.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
17.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
17.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
17.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
17.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
17.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
17.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
16.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
16.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
16.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
16.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
16.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
16.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
16.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
16.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
16.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
16.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
16.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
16.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
16.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
15.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
15.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
15.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
15.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
15.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
15.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
15.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
15.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
15.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
15.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
14.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
14.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
14.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
14.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
14.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
14.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
13.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
13.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
13.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
13.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
13.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
13.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
13.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
12.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
12.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
12.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
12.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
12.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
12.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
12.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
12.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
12.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
12.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
12.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
11.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
11.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
11.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
11.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
11.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
11.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
11.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
11.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
11.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
11.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
11.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
11.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
11.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
10.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
10.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
10.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
10.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
10.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
10.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
10.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
10.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
10.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
9.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
9.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
9.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
9.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
9.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
9.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
9.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
9.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
9.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
8.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
8.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
8.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
8.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
8.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
8.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
8.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
7.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
7.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
7.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
7.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
7.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
7.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
6.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
6.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
6.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
6.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
6.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
6.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
6.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
5.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
5.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
5.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
5.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
5.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
5.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
5.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
4.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
4.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
4.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
4.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
3.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
3.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
3.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
267
Tumor
1.0
951
Tumor
0.8
824
Normal
0.6
452
Normal
0.6
746
Normal
0.6
1031
Tumor
0.6
568
Normal
0.6
112
Tumor
0.5
913
Tumor
0.5
466
Normal
0.5
817
Tumor
0.5
342
Normal
0.5
376
Normal
0.5
938
Normal
0.5
564
Normal
0.5
464
Normal
0.5
186
Normal
0.5
858
Normal
0.5
862
Normal
0.5
221
Tumor
0.5
955
Tumor
0.5
964
Normal
0.5
358
Normal
0.5
113
Tumor
0.5
314
Normal
0.5
742
Normal
0.5
618
Normal
0.5
484
Normal
0.5
436
Normal
0.5
477
Tumor
0.5
278
Normal
0.5
148
Normal
0.5
648
Normal
0.4
922
Normal
0.4
728
Normal
0.4
1046
Normal
0.4
866
Normal
0.4
172
Normal
0.4
388
Normal
0.4
878
Normal
0.4
456
Normal
0.4
494
Normal
0.4
366
Normal
0.4
258
Normal
0.4
142
Normal
0.4
944
Normal
0.4
534
Normal
0.4
196
Normal
0.4
546
Normal
0.4
422
Normal
0.4
353
Tumor
0.4
698
Normal
0.4
356
Normal
0.4
162
Normal
0.4
465
Tumor
0.4
984
Normal
0.4
868
Normal
0.4
222
Normal
0.4
433
Tumor
0.4
132
Normal
0.4
1014
Normal
0.4
128
Normal
0.4
664
Normal
0.4
1032
Normal
0.4
864
Normal
0.4
723
Tumor
0.4
954
Normal
0.4
744
Normal
0.4
472
Normal
0.4
468
Normal
0.4
1016
Normal
0.4
636
Normal
0.3
362
Normal
0.3
572
Normal
0.3
518
Normal
0.3
818
Normal
0.3
874
Normal
0.3
1026
Normal
0.3
426
Normal
0.3
352
Normal
0.3
354
Normal
0.3
1028
Normal
0.3
738
Normal
0.3
286
Normal
0.3
462
Normal
0.3
914
Normal
0.3
882
Normal
0.3
642
Normal
0.3
617
Tumor
0.3
368
Normal
0.3
672
Normal
0.3
474
Normal
0.3
616
Normal
0.3
232
Normal
0.3
138
Normal
0.3
912
Normal
0.3
1025
Tumor
0.3
448
Normal
0.3
924
Normal
0.3
327
Tumor
0.3
446
Normal
0.3
714
Normal
0.3
722
Normal
0.3
412
Normal
0.3
786
Normal
0.3
1045
Tumor
0.3
298
Normal
0.3
952
Normal
0.3
214
Normal
0.3
136
Normal
0.3
114
Normal
0.3
574
Normal
0.3
428
Normal
0.3
111
Normal
0.3
662
Normal
0.3
958
Normal
0.3
982
Normal
0.3
1022
Normal
0.3
628
Normal
0.3
392
Normal
0.3
394
Normal
0.2
1042
Normal
0.2
526
Normal
0.2
976
Normal
0.2
332
Normal
0.2
778
Normal
0.2
514
Normal
0.2
956
Normal
0.2
1041
Tumor
0.2
364
Normal
0.2
721
Tumor
0.2
756
Normal
0.2
727
Tumor
0.2
482
Normal
0.2
666
Normal
0.2
141
Tumor
0.2
414
Normal
0.2
396
Normal
0.2
516
Normal
0.2
884
Normal
0.2
488
Normal
0.2
124
Normal
0.2
411
Tumor
0.2
937
Tumor
0.2
852
Normal
0.2
344
Normal
0.2
384
Normal
0.2
554
Normal
0.2
328
Normal
0.2
528
Normal
0.2
227
Tumor
0.2
975
Tumor
0.2
968
Normal
0.2
272
Normal
0.2
416
Normal
0.2
713
Tumor
0.2
424
Normal
0.2
341
Tumor
0.2
277
Tumor
0.2
926
Normal
0.2
647
Tumor
0.2
571
Tumor
0.2
146
Normal
0.2
816
Normal
0.2
696
Normal
0.2
432
Normal
0.2
921
Tumor
0.2
218
Normal
0.2
481
Tumor
0.1
312
Normal
0.1
627
Tumor
0.1
686
Normal
0.1
147
Tumor
0.1
228
Normal
0.1
918
Normal
0.1
188
Normal
0.1
558
Normal
0.1
463
Tumor
0.1
635
Tumor
0.1
517
Tumor
0.1
867
Tumor
0.1
284
Normal
0.1
487
Tumor
0.1
262
Normal
0.1
1044
Normal
0.1
857
Tumor
0.1
434
Normal
0.1
716
Normal
0.1
423
Tumor
0.1
413
Tumor
0.1
386
Normal
0.1
557
Tumor
0.1
695
Tumor
0.1
873
Tumor
0.1
978
Normal
0.1
966
Normal
0.1
925
Tumor
0.1
271
Tumor
0.0
785
Tumor
0.0
415
Tumor
0.0
538
Normal
0.0
493
Tumor
0.0
916
Normal
0.0
755
Tumor
0.0
171
Tumor
0.0
524
Normal
0.0
478
Normal
0.0
268
Normal
0.0
641
Tumor
0.0
212
Normal
0.0
126
Normal
0.0
697
Tumor
0.0
395
Tumor
0.0
498
Normal
0.0
963
Tumor
0.0
444
Normal
0.0
883
Tumor
-0.1
741
Tumor
-0.1
361
Tumor
-0.1
443
Tumor
-0.1
492
Normal
-0.1
365
Tumor
-0.1
224
Normal
-0.1
135
Tumor
-0.1
217
Tumor
-0.1
563
Tumor
-0.1
445
Tumor
-0.1
435
Tumor
-0.1
127
Tumor
-0.1
967
Tumor
-0.1
527
Tumor
-0.2
881
Tumor
-0.2
145
Tumor
-0.2
513
Tumor
-0.2
363
Tumor
-0.2
515
Tumor
-0.2
185
Tumor
-0.2
261
Tumor
-0.2
1021
Tumor
-0.2
1015
Tumor
-0.2
187
Tumor
-0.2
431
Tumor
-0.2
877
Tumor
-0.2
331
Tumor
-0.2
467
Tumor
-0.3
685
Tumor
-0.3
231
Tumor
-0.3
137
Tumor
-0.3
553
Tumor
-0.3
745
Tumor
-0.3
192
Normal
-0.3
483
Tumor
-0.3
911
Tumor
-0.3
123
Tumor
-0.3
981
Tumor
-0.3
923
Tumor
-0.3
1043
Tumor
-0.3
823
Tumor
-0.3
473
Tumor
-0.3
865
Tumor
-0.3
191
Tumor
-0.3
421
Tumor
-0.3
533
Tumor
-0.3
355
Tumor
-0.3
861
Tumor
-0.4
777
Tumor
-0.4
615
Tumor
-0.4
131
Tumor
-0.4
497
Tumor
-0.4
393
Tumor
-0.4
977
Tumor
-0.4
536
Normal
-0.4
357
Tumor
-0.4
814
Normal
-0.4
461
Tumor
-0.4
915
Tumor
-0.4
455
Tumor
-0.4
715
Tumor
-0.4
917
Tumor
-0.4
195
Tumor
-0.5
671
Tumor
-0.5
387
Tumor
-0.5
737
Tumor
-0.5
743
Tumor
-0.5
813
Tumor
-0.5
285
Tumor
-0.5
851
Tumor
-0.5
451
Tumor
-0.5
1027
Tumor
-0.5
983
Tumor
-0.5
213
Tumor
-0.5
535
Tumor
-0.5
447
Tumor
-0.5
257
Tumor
-0.5
525
Tumor
-0.5
1013
Tumor
-0.6
661
Tumor
-0.6
427
Tumor
-0.6
161
Tumor
-0.6
545
Tumor
-0.6
957
Tumor
-0.6
391
Tumor
-0.6
367
Tumor
-0.6
471
Tumor
-0.6
537
Tumor
-0.6
523
Tumor
-0.7
965
Tumor
-0.7
383
Tumor
-0.7
223
Tumor
-0.7
943
Tumor
-0.7
567
Tumor
-0.7
385
Tumor
-0.7
343
Tumor
-0.8
573
Tumor
-0.8
863
Tumor
-0.8
425
Tumor
-0.8
297
Tumor
-0.8
125
Tumor
-0.9
375
Tumor
-1.0
491
Tumor
-1.0
283
Tumor
-1.0
663
Tumor
-1.1
313
Tumor
-1.1
953
Tumor
-1.1
351
Tumor
-1.1
815
Tumor
-1.1
311
Tumor
-1.1
665
Tumor
-1.2
724
Normal
-1.2
211
Tumor
-1.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
