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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
19.7
nTPM
HPA Brain:
47.0
nTPM
GTEx:
19.7
nTPM
FANTOM5:
85.5
Scaled Tags Per Million
Pig:
29.0
nTPM
Mouse:
13.4
nTPM
Allen mouse:
1.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
47.0
Sample id
Sample description
nTPM
Amygdala nTPM: 39.8
2695
Female, age 67, right hemisphere
68.0
2814
Male, age 76, right hemisphere
43.3
2517
Female, age 94, left hemisphere
35.2
2514
Male, age 75, right hemisphere
33.4
1987
Female, age 91, left hemisphere
19.4
Basal amygdala nTPM: 36.3
2827
Female, age 67, right hemisphere
62.4
2609
Male, age 75, right hemisphere
39.1
1955
Male, age 76, both hemispheres
31.3
2110
Male, age 80, left hemisphere
31.1
2685
Female, age 94, left hemisphere
29.9
2243
Female, age 91, right hemisphere
23.9
Central amygdala nTPM: 40.1
2826
Female, age 94, left hemisphere
61.7
2515
Male, age 75, right hemisphere
45.1
1905
Male, age 76, both hemispheres
40.9
2239
Male, age 80, left hemisphere
29.5
2701
Female, age 91, right hemisphere
23.1
Corticomedial amygdala nTPM: 32.2
2428
Male, age 75, right hemisphere
44.2
2535
Female, age 67, right hemisphere
42.0
2429
Female, age 94, left hemisphere
30.3
2240
Male, age 76, both hemispheres
29.9
2829
Male, age 80, left hemisphere
25.7
2242
Female, age 91, right hemisphere
20.8
Lateral amygdala nTPM: 47.0
2830
Female, age 67, right hemisphere
94.6
2534
Female, age 94, left hemisphere
51.7
2516
Male, age 75, right hemisphere
46.9
1883
Male, age 76, both hemispheres
35.3
2256
Male, age 80, left hemisphere
28.6
2255
Female, age 91, right hemisphere
24.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
19.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 19.7
Samples: 152
Max nTPM: 116.3
Min nTPM: 1.3
Std nTPM: 16.6
Median nTPM: 14.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
116.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
82.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
69.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
67.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
66.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
58.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
57.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
57.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
55.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
47.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
45.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
41.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
41.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
40.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
39.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
39.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
39.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
36.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
34.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
34.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
33.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
33.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
31.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
31.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
30.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
30.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
30.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
30.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
30.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
29.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
28.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
28.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
28.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
27.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
26.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
25.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
25.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
25.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
25.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
24.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
23.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
23.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
23.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
22.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
21.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
20.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
20.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
20.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
20.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
20.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
19.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
19.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
19.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
19.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
18.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
18.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
18.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
18.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
18.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
18.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
18.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
17.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
17.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
17.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
17.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
16.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
16.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
15.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
15.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
15.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
15.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
15.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
15.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
15.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
15.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
14.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
14.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
14.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
14.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
13.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
13.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
13.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
13.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
13.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
13.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
13.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
12.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
12.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
12.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
12.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
12.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
12.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
12.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
12.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
11.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
11.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
11.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
11.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
11.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
10.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
10.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
10.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
10.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
10.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
10.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
10.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
10.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
10.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
10.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
10.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
10.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
10.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
9.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
9.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
9.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
9.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
9.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
9.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
8.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
8.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
8.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
7.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
7.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
7.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
7.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
7.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
7.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
7.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
6.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
6.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
6.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
6.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
6.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
6.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
6.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
6.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
6.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
6.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
5.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
5.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
5.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
5.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
5.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
4.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
3.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
2.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
2.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
2.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
2.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
2.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
2.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
1.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
13.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 13.4
Samples: 4
Max nTPM: 15.5
Min nTPM: 11.9
Sample A
Male
12.3
Sample B
Male
11.9
Sample C
Female
15.5
Sample D
Female
13.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.