We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DNAJC3 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
116.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
89.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
86.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
64.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
54.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
53.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
53.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
48.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
47.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
47.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
45.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
43.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
43.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
42.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
41.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
41.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
40.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
39.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
39.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
38.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
38.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
37.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
37.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
36.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
36.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
35.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
35.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
35.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
35.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
34.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
34.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
34.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
34.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
33.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
33.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
33.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
33.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
32.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
32.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
32.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
32.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
31.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
31.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
31.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
31.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
31.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
31.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
30.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
30.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
29.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
29.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
29.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
29.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
29.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
29.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
29.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
29.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
29.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
28.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
28.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
28.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
27.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
27.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
27.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
27.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
27.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
26.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
26.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
26.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
26.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
26.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
26.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
25.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
25.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
25.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
25.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
25.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
25.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
24.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
24.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
24.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
24.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
24.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
24.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
24.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
24.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
24.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
23.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
23.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
23.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
23.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
23.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
23.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
23.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
23.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
23.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
23.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
22.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
22.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
22.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
22.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
22.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
22.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
22.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
22.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
22.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
22.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
22.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
21.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
21.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
21.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
21.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
21.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
21.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
21.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
21.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
21.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
21.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
21.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
21.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
21.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
21.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
20.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
20.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
20.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
20.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
20.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
20.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
20.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
20.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
20.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
20.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
19.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
19.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
19.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
19.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
19.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
19.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
19.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
19.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
19.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
19.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
19.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
19.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
19.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
19.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
19.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
19.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
19.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
18.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
18.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
18.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
18.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
18.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
18.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
18.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
18.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
18.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
18.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
18.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
18.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
18.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
18.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
18.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
18.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
18.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
17.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
17.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
17.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
17.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
17.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
17.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
17.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
17.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
17.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
17.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
17.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
17.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
17.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
16.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
16.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
16.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
16.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
16.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
16.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
16.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
16.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
16.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
16.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
16.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
16.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
16.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
15.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
15.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
15.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
15.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
15.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
15.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
15.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
15.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
15.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
15.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
15.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
15.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
15.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
14.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
14.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
14.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
14.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
14.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
14.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
14.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
14.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
14.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
14.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
14.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
14.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
14.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
14.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
14.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
14.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
14.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
14.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
13.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
13.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
13.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
13.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
13.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
13.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
13.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
13.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
13.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
13.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
13.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
13.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
13.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
12.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
12.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
12.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
12.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
12.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
12.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
12.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
12.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
12.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
12.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
12.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
12.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
12.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
12.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
12.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
12.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
12.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
12.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
12.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
12.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
12.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
12.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
12.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
12.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
11.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
11.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
11.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
11.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
11.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
11.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
11.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
11.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
11.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
11.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
11.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
11.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
10.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
10.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
10.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
10.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
10.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
10.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
10.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
10.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
10.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
10.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
10.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
10.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
10.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
10.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
9.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
9.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
9.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
9.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
9.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
9.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
9.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
9.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
9.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
9.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
9.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
9.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
8.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
8.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
8.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
8.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
8.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
8.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
8.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
8.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
8.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
8.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
8.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
8.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
8.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
7.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
7.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
7.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
7.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
7.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
7.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
7.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
7.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
7.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
7.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
6.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
6.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
6.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
6.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
6.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
6.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
6.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
6.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
6.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
6.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
6.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
6.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
6.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
5.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
5.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
5.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
5.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
5.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
4.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
4.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
4.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
3.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DNAJC3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.5
Number of samples
231
Samples
Sample
Description
TPM
DO48723
0 years, male, NA, stage:1, alive, 600 days
84.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
62.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
48.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
42.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
42.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
39.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
37.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
36.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
35.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
34.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
32.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
32.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
32.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
30.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
29.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
29.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
29.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
29.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
28.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
28.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
27.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
27.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
26.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
26.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
26.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
26.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
25.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
25.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
24.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
24.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
24.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
24.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
23.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
23.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
23.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
23.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
23.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
23.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
22.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
22.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
22.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
22.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
22.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
22.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
22.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
21.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
21.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
21.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
21.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
21.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
21.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
20.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
20.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
20.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
20.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
20.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
20.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
20.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
20.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
20.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
19.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
19.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
19.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
19.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
19.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
19.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
19.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
19.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
18.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
18.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
18.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
18.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
18.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
18.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
18.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
18.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
18.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
18.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
18.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
18.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
18.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
18.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
18.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
18.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
18.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
18.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
17.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
17.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
17.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
17.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
17.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
17.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
17.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
17.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
17.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
17.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
17.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
17.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
17.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
17.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
17.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
17.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
16.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
16.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
16.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
16.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
16.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
16.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
16.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
16.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
15.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
15.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
15.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
15.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
15.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
15.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
15.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
15.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
15.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
15.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
15.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
15.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
15.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
15.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
15.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
15.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
15.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
15.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
15.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
15.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
14.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
14.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
14.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
14.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
14.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
14.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
14.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
14.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
14.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
14.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
14.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
14.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
14.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
14.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
14.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
14.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
14.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
13.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
13.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
13.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
13.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
13.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
13.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
13.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
13.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
13.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
13.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
13.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
13.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
13.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
13.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
13.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
13.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
13.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
13.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
13.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
12.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
12.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
12.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
12.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
12.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
12.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
12.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
12.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
12.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
12.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
12.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
12.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
12.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
12.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
12.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
12.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
12.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
11.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
11.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
11.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
11.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
11.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
11.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
11.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
11.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
11.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
11.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
11.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
11.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
10.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
10.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
10.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
10.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
10.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
10.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
10.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
10.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
10.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
10.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
9.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
9.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
9.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
9.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
9.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
9.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
9.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
9.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
9.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
9.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
8.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
8.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
8.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
8.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
7.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
7.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
7.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
7.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
7.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
6.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
6.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
5.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
4.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
4.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
4.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
135
Tumor
1.7
227
Tumor
1.6
877
Tumor
1.1
777
Tumor
1.0
863
Tumor
1.0
445
Tumor
1.0
523
Tumor
1.0
467
Tumor
1.0
697
Tumor
1.0
1027
Tumor
0.9
813
Tumor
0.9
923
Tumor
0.8
713
Tumor
0.7
257
Tumor
0.7
963
Tumor
0.6
351
Tumor
0.6
743
Tumor
0.6
1025
Tumor
0.6
393
Tumor
0.6
557
Tumor
0.5
851
Tumor
0.5
567
Tumor
0.5
865
Tumor
0.5
497
Tumor
0.5
487
Tumor
0.5
745
Tumor
0.4
357
Tumor
0.4
571
Tumor
0.4
131
Tumor
0.4
187
Tumor
0.4
737
Tumor
0.4
147
Tumor
0.4
517
Tumor
0.4
1021
Tumor
0.4
553
Tumor
0.4
515
Tumor
0.4
473
Tumor
0.4
721
Tumor
0.4
125
Tumor
0.3
355
Tumor
0.3
491
Tumor
0.3
983
Tumor
0.3
195
Tumor
0.3
663
Tumor
0.3
481
Tumor
0.3
1043
Tumor
0.3
857
Tumor
0.3
817
Tumor
0.2
395
Tumor
0.2
433
Tumor
0.2
823
Tumor
0.2
951
Tumor
0.2
554
Normal
0.2
814
Normal
0.2
191
Tumor
0.2
218
Normal
0.2
696
Normal
0.2
353
Tumor
0.2
466
Normal
0.2
527
Tumor
0.2
615
Tumor
0.2
944
Normal
0.1
311
Tumor
0.1
957
Tumor
0.1
392
Normal
0.1
635
Tumor
0.1
286
Normal
0.1
411
Tumor
0.1
223
Tumor
0.1
277
Tumor
0.1
327
Tumor
0.1
535
Tumor
0.1
1016
Normal
0.1
917
Tumor
0.1
375
Tumor
0.1
1044
Normal
0.1
953
Tumor
0.1
137
Tumor
0.1
415
Tumor
0.1
526
Normal
0.1
368
Normal
0.1
113
Tumor
0.1
723
Tumor
0.1
471
Tumor
0.1
451
Tumor
0.1
161
Tumor
0.0
1015
Tumor
0.0
524
Normal
0.0
572
Normal
0.0
461
Tumor
0.0
435
Tumor
0.0
462
Normal
0.0
536
Normal
0.0
528
Normal
0.0
112
Tumor
0.0
1014
Normal
0.0
518
Normal
0.0
1026
Normal
0.0
738
Normal
0.0
573
Tumor
0.0
943
Tumor
0.0
228
Normal
0.0
141
Tumor
0.0
261
Tumor
0.0
636
Normal
0.0
385
Tumor
0.0
545
Tumor
0.0
558
Normal
0.0
728
Normal
0.0
665
Tumor
0.0
955
Tumor
0.0
873
Tumor
0.0
686
Normal
0.0
937
Tumor
0.0
331
Tumor
0.0
952
Normal
0.0
514
Normal
0.0
448
Normal
0.0
284
Normal
0.0
722
Normal
0.0
285
Tumor
-0.1
727
Tumor
-0.1
981
Tumor
-0.1
778
Normal
-0.1
387
Tumor
-0.1
537
Tumor
-0.1
742
Normal
-0.1
455
Tumor
-0.1
617
Tumor
-0.1
534
Normal
-0.1
271
Tumor
-0.1
493
Tumor
-0.1
1022
Normal
-0.1
741
Tumor
-0.1
698
Normal
-0.1
492
Normal
-0.1
443
Tumor
-0.1
815
Tumor
-0.1
484
Normal
-0.1
618
Normal
-0.1
142
Normal
-0.1
568
Normal
-0.1
714
Normal
-0.1
977
Tumor
-0.1
356
Normal
-0.1
494
Normal
-0.1
328
Normal
-0.1
363
Tumor
-0.1
967
Tumor
-0.1
755
Tumor
-0.1
966
Normal
-0.1
978
Normal
-0.1
866
Normal
-0.1
145
Tumor
-0.1
616
Normal
-0.1
446
Normal
-0.1
376
Normal
-0.1
968
Normal
-0.1
423
Tumor
-0.1
488
Normal
-0.1
685
Tumor
-0.1
756
Normal
-0.1
915
Tumor
-0.1
111
Normal
-0.2
1013
Tumor
-0.2
746
Normal
-0.2
628
Normal
-0.2
868
Normal
-0.2
212
Normal
-0.2
816
Normal
-0.2
864
Normal
-0.2
452
Normal
-0.2
938
Normal
-0.2
785
Tumor
-0.2
661
Tumor
-0.2
447
Tumor
-0.2
232
Normal
-0.2
642
Normal
-0.2
313
Tumor
-0.2
412
Normal
-0.2
984
Normal
-0.2
436
Normal
-0.2
641
Tumor
-0.2
217
Tumor
-0.2
148
Normal
-0.2
965
Tumor
-0.2
468
Normal
-0.2
396
Normal
-0.2
912
Normal
-0.2
332
Normal
-0.2
786
Normal
-0.2
128
Normal
-0.2
267
Tumor
-0.2
394
Normal
-0.2
1032
Normal
-0.2
852
Normal
-0.2
861
Tumor
-0.2
314
Normal
-0.2
672
Normal
-0.2
343
Tumor
-0.2
924
Normal
-0.2
426
Normal
-0.2
352
Normal
-0.2
627
Tumor
-0.2
546
Normal
-0.2
724
Normal
-0.2
878
Normal
-0.2
474
Normal
-0.2
574
Normal
-0.2
516
Normal
-0.2
464
Normal
-0.2
231
Tumor
-0.2
716
Normal
-0.2
964
Normal
-0.2
862
Normal
-0.2
956
Normal
-0.2
414
Normal
-0.3
364
Normal
-0.3
413
Tumor
-0.3
874
Normal
-0.3
171
Tumor
-0.3
358
Normal
-0.3
354
Normal
-0.3
344
Normal
-0.3
478
Normal
-0.3
926
Normal
-0.3
695
Tumor
-0.3
124
Normal
-0.3
564
Normal
-0.3
975
Tumor
-0.3
123
Tumor
-0.3
647
Tumor
-0.3
648
Normal
-0.3
664
Normal
-0.3
538
Normal
-0.3
211
Tumor
-0.3
136
Normal
-0.3
214
Normal
-0.3
982
Normal
-0.3
533
Tumor
-0.3
498
Normal
-0.3
922
Normal
-0.3
186
Normal
-0.3
867
Tumor
-0.3
422
Normal
-0.3
914
Normal
-0.3
472
Normal
-0.3
342
Normal
-0.3
1042
Normal
-0.3
172
Normal
-0.3
386
Normal
-0.3
666
Normal
-0.3
432
Normal
-0.3
671
Tumor
-0.3
916
Normal
-0.3
482
Normal
-0.3
431
Tumor
-0.3
1028
Normal
-0.3
224
Normal
-0.3
883
Tumor
-0.3
744
Normal
-0.4
483
Tumor
-0.4
976
Normal
-0.4
662
Normal
-0.4
127
Tumor
-0.4
1041
Tumor
-0.4
954
Normal
-0.4
1031
Tumor
-0.4
456
Normal
-0.4
925
Tumor
-0.4
918
Normal
-0.4
258
Normal
-0.4
958
Normal
-0.4
388
Normal
-0.4
196
Normal
-0.4
114
Normal
-0.4
428
Normal
-0.4
513
Tumor
-0.4
1046
Normal
-0.4
434
Normal
-0.4
132
Normal
-0.4
416
Normal
-0.4
424
Normal
-0.4
824
Normal
-0.4
818
Normal
-0.4
882
Normal
-0.4
427
Tumor
-0.4
138
Normal
-0.4
367
Tumor
-0.4
421
Tumor
-0.4
162
Normal
-0.4
298
Normal
-0.4
283
Tumor
-0.4
525
Tumor
-0.4
262
Normal
-0.5
384
Normal
-0.5
362
Normal
-0.5
858
Normal
-0.5
444
Normal
-0.5
185
Tumor
-0.5
921
Tumor
-0.5
126
Normal
-0.5
365
Tumor
-0.5
192
Normal
-0.5
361
Tumor
-0.5
278
Normal
-0.5
222
Normal
-0.5
913
Tumor
-0.5
463
Tumor
-0.5
425
Tumor
-0.5
312
Normal
-0.5
297
Tumor
-0.5
884
Normal
-0.5
911
Tumor
-0.6
272
Normal
-0.6
146
Normal
-0.6
715
Tumor
-0.6
213
Tumor
-0.6
477
Tumor
-0.6
268
Normal
-0.6
221
Tumor
-0.6
366
Normal
-0.6
1045
Tumor
-0.7
188
Normal
-0.7
881
Tumor
-0.7
391
Tumor
-0.7
465
Tumor
-0.8
563
Tumor
-0.9
383
Tumor
-0.9
341
Tumor
-0.9
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
