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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BEX4 is potential prognostic, high expression is favorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
64.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
231.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
149.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
138.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
134.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
133.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
132.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
127.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
116.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
113.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
100.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
100.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
98.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
98.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
95.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
94.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
93.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
91.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
90.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
89.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
88.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
85.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
83.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
81.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
78.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
74.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
73.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
72.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
69.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
69.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
67.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
66.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
65.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
64.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
62.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
50.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
48.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
47.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
47.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
47.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
45.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
44.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
42.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
39.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
35.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
30.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
28.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
27.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
24.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
23.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
22.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
22.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
21.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
21.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
20.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
20.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
16.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
9.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
6.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
5.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
5.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
5.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BEX4 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
186.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
161.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
159.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
154.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
154.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
151.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
126.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
126.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
122.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
120.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
117.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
115.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
115.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
111.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
107.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
105.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
105.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
103.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
103.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
101.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
99.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
96.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
95.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
94.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
93.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
92.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
92.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
91.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
90.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
90.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
90.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
89.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
89.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
88.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
88.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
88.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
88.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
86.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
86.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
86.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
86.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
85.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
84.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
84.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
84.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
83.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
83.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
83.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
83.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
82.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
82.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
82.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
82.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
81.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
81.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
80.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
80.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
79.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
79.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
78.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
78.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
78.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
78.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
77.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
77.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
77.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
77.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
77.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
77.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
77.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
76.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
76.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
75.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
75.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
75.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
75.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
74.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
74.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
74.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
74.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
74.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
73.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
73.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
72.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
72.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
72.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
72.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
72.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
72.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
71.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
71.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
71.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
71.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
71.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
71.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
70.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
70.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
70.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
70.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
70.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
70.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
69.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
69.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
69.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
69.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
69.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
68.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
68.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
68.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
68.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
68.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
68.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
67.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
67.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
67.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
67.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
67.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
67.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
66.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
66.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
65.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
65.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
65.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
65.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
64.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
64.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
64.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
64.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
64.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
64.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
63.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
63.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
63.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
62.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
62.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
62.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
62.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
62.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
61.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
61.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
61.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
61.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
60.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
60.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
60.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
60.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
60.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
60.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
59.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
59.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
59.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
59.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
59.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
59.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
59.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
59.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
59.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
58.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
58.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
58.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
58.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
57.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
57.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
57.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
57.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
57.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
57.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
56.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
56.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
56.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
56.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
56.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
55.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
55.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
55.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
55.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
54.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
54.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
53.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
53.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
52.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
52.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
52.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
52.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
52.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
52.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
52.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
52.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
51.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
51.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
51.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
51.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
50.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
50.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
50.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
50.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
50.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
50.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
50.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
49.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
49.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
49.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
48.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
48.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
48.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
48.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
48.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
47.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
47.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
47.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
47.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
47.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
47.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
46.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
46.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
46.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
46.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
46.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
46.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
45.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
45.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
45.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
45.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
45.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
45.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
45.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
45.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
45.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
44.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
44.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
44.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
44.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
44.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
43.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
43.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
43.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
43.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
43.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
43.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
43.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
42.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
42.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
42.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
42.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
41.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
41.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
41.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
41.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
41.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
41.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
41.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
40.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
40.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
40.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
40.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
40.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
39.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
39.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
38.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
38.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
38.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
38.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
38.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
38.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
38.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
38.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
38.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
37.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
37.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
37.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
37.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
37.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
37.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
37.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
36.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
36.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
36.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
36.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
36.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
36.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
36.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
36.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
35.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
35.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
35.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
35.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
35.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
35.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
35.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
35.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
34.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
34.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
34.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
34.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
34.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
34.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
34.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
34.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
34.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
34.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
34.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
34.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
33.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
33.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
33.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
33.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
33.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
32.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
32.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
32.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
32.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
31.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
31.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
31.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
31.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
31.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
30.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
30.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
30.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
30.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
30.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
29.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
29.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
29.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
29.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
29.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
29.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
29.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
29.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
29.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
29.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
28.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
28.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
28.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
28.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
28.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
28.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
28.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
28.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
28.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
28.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
28.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
27.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
27.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
27.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
27.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
27.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
27.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
27.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
27.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
27.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
27.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
27.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
26.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
26.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
26.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
26.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
26.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
26.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
25.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
25.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
25.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
25.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
25.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
25.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
25.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
25.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
24.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
24.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
24.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
24.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
24.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
24.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
24.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
24.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
24.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
24.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
23.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
23.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
23.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
23.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
23.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
23.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
23.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
23.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
23.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
23.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
22.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
22.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
22.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
22.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
22.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
22.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
22.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
22.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
22.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
22.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
22.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
22.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
22.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
21.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
21.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
21.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
21.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
21.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
21.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
21.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
21.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
20.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
20.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
20.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
20.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
20.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
20.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
20.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
20.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
20.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
19.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
19.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
19.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
19.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
19.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
18.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
18.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
18.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
18.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
18.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
18.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
18.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
18.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
18.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
17.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
17.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
17.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
17.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
17.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
17.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
17.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
16.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
16.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
16.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
16.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
16.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
15.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
15.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
15.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
15.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
15.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
15.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
15.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
14.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
14.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
14.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
14.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
13.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
13.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
13.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
13.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
13.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
13.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
13.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
12.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
12.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
12.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
12.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
11.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
10.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
10.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
10.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
10.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
10.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
10.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
10.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
9.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
8.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
8.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
6.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
6.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
6.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
5.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
5.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
4.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BEX4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
44.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
180.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
123.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
102.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
101.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
89.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
89.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
88.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
86.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
85.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
84.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
84.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
81.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
79.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
77.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
75.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
73.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
72.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
72.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
69.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
68.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
67.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
65.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
65.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
64.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
60.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
60.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
58.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
58.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
58.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
58.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
56.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
55.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
55.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
54.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
50.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
49.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
47.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
47.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
47.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
47.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
45.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
44.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
44.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
44.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
43.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
43.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
43.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
43.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
42.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
41.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
40.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
39.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
38.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
36.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
32.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
32.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
31.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
31.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
31.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
30.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
30.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
29.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
29.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
28.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
26.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
25.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
24.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
24.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
24.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
23.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
22.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
21.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
21.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
21.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
21.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
18.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
17.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
17.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
17.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
17.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
16.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
15.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
15.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
15.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
14.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
14.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
13.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
13.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
13.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
13.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
11.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
11.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
10.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
10.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
9.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BEX4 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
194.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
177.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
172.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
172.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
150.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
149.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
147.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
146.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
129.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
123.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
117.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
115.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
115.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
113.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
113.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
112.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
111.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
105.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
103.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
101.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
98.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
98.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
97.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
96.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
96.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
95.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
93.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
91.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
90.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
90.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
87.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
87.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
86.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
85.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
85.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
85.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
84.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
83.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
82.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
82.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
82.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
82.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
81.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
81.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
79.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
79.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
79.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
77.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
77.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
76.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
76.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
75.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
75.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
75.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
75.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
75.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
75.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
74.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
74.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
73.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
73.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
73.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
72.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
72.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
72.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
72.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
71.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
70.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
69.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
69.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
69.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
69.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
69.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
68.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
68.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
67.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
67.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
66.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
66.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
65.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
65.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
65.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
65.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
65.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
65.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
64.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
64.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
64.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
64.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
63.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
62.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
62.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
62.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
61.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
61.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
61.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
60.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
60.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
60.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
60.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
59.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
59.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
59.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
58.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
58.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
58.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
58.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
58.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
58.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
57.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
57.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
57.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
56.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
56.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
56.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
56.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
55.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
55.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
55.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
54.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
54.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
53.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
53.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
53.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
53.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
53.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
52.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
52.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
52.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
51.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
51.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
51.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
51.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
51.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
50.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
50.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
49.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
49.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
49.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
48.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
47.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
47.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
47.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
47.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
47.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
47.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
46.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
46.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
46.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
46.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
45.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
45.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
44.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
44.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
44.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
44.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
44.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
43.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
43.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
42.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
42.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
42.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
42.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
42.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
42.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
42.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
42.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
41.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
41.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
41.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
41.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
40.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
40.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
40.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
40.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
39.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
39.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
39.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
39.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
39.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
39.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
39.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
38.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
38.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
37.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
37.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
37.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
37.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
36.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
36.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
36.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
35.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
35.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
35.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
35.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
34.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
34.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
34.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
34.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
33.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
33.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
33.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
33.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
32.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
32.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
32.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
32.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
32.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
31.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
31.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
31.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
30.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
30.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
30.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
30.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
29.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
29.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
29.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
29.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
28.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
28.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
28.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
28.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
28.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
27.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
27.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
27.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
27.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
26.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
26.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
25.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
25.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
25.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
24.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
24.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
24.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
23.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
23.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
22.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
22.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
22.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
21.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
21.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
21.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
20.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
20.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
20.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
20.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
19.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
18.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
17.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
17.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
17.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
16.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
15.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
14.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
14.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
14.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
12.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
9.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
8.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
8.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
4.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
4.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
4.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
2.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
2.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
1.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
