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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
411.6
nTPM
HPA Brain:
598.7
nTPM
GTEx:
411.6
nTPM
FANTOM5:
350.9
Scaled Tags Per Million
Pig:
849.7
nTPM
Mouse:
24.7
nTPM
Allen mouse:
12.7
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
598.7
Sample id
Sample description
nTPM
Hippocampus nTPM: 546.6
2621
Female, age 67, right hemisphere
645.6
1898
Male, age 80, left hemisphere
629.5
2148
Female, age 91, left hemisphere
589.6
2529
Female, age 94, left hemisphere
552.6
1855
Male, age 76, left hemisphere
500.9
1911
Female, age 85, right hemisphere
361.6
Dentate gyrus nTPM: 598.7
2530
Female, age 94, left hemisphere
888.1
2531
Female, age 67, both hemispheres
704.2
1927
Female, age 91, both hemispheres
606.3
2246
Female, age 85, both hemispheres
492.7
2010
Male, age 76, both hemispheres
488.7
2528
Male, age 74, both hemispheres
412.4
Entorhinal gyrus nTPM: 526.8
2764
Male, age 80, right hemisphere
683.1
2613
Female, age 94, left hemisphere
593.9
1787
Male, age 76, left hemisphere
518.2
2117
Female, age 91, right hemisphere
468.1
1938
Female, age 85, left hemisphere
452.1
2686
Male, age 75, right hemisphere
445.6
Hippocampus, CA1 nTPM: 491.8
2749
Male, age 80, left hemisphere
727.9
2045
Male, age 76, both hemispheres
493.9
1873
Female, age 85, both hemispheres
444.1
2527
Male, age 74, both hemispheres
436.5
2082
Female, age 91, right hemisphere
356.4
Hippocampus, CA2 nTPM: 491.6
1963
Male, age 80, left hemisphere
679.1
2437
Female, age 94, left hemisphere
605.2
1892
Male, age 76, both hemispheres
482.3
2113
Female, age 91, right hemisphere
431.5
1940
Female, age 85, left hemisphere
418.1
2249
Male, age 74, both hemispheres
333.3
Hippocampus, CA3 nTPM: 513.2
2861
Female, age 67, both hemispheres
780.6
2620
Female, age 94, left hemisphere
664.6
2137
Male, age 80, left hemisphere
503.7
2436
Male, age 74, both hemispheres
436.5
1867
Male, age 76, both hemispheres
387.9
1891
Female, age 85, both hemispheres
305.8
Parahippocampal cortex nTPM: 519.3
2245
Female, age 91, both hemispheres
779.0
2250
Female, age 67, right hemisphere
622.2
2622
Female, age 67, right hemisphere
575.9
2693
Female, age 94, both hemispheres
548.9
2532
Female, age 72, left hemisphere
518.6
1990
Female, age 91, right hemisphere
516.8
1933
Female, age 85, both hemispheres
458.7
1850
Male, age 80, both hemispheres
433.2
2018
Male, age 76, both hemispheres
404.2
2692
Male, age 74, both hemispheres
335.4
Perirhinal gyrus nTPM: 583.0
1794
Male, age 80, right hemisphere
694.3
2521
Female, age 94, right hemisphere
685.7
1847
Female, age 91, left hemisphere
600.1
2848
Male, age 76, right hemisphere
492.9
1841
Female, age 85, right hemisphere
442.1
Subiculum nTPM: 412.4
1977
Female, age 85, both hemispheres
531.1
2619
Male, age 74, both hemispheres
489.8
2438
Female, age 94, left hemisphere
413.9
2729
Female, age 91, right hemisphere
385.8
1901
Male, age 80, both hemispheres
363.9
2042
Male, age 76, both hemispheres
289.7
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
411.6
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 411.6
Samples: 197
Max nTPM: 1218.4
Min nTPM: 25.1
Std nTPM: 215.3
Median nTPM: 391.6
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
1218.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
1037.9
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
939.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
921.0
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
897.7
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
894.2
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
878.0
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
857.3
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
840.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
838.2
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
837.1
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
827.3
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
807.9
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
798.1
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
759.8
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
742.5
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
727.9
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
705.4
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
704.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
699.3
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
695.6
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
690.5
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
673.1
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
670.3
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
653.7
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
651.2
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
650.1
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
649.8
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
642.5
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
640.4
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
638.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
622.2
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
621.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
611.5
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
607.2
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
597.7
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
596.4
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
585.4
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
583.4
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
576.8
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
576.4
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
571.1
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
570.4
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
568.6
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
562.0
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
559.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
554.5
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
549.0
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
545.7
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
541.9
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
541.0
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
538.1
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
531.7
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
530.4
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
525.4
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
505.6
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
504.3
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
492.5
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
490.5
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
489.2
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
488.5
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
486.3
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
484.2
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
482.6
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
481.5
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
478.7
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
473.6
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
465.8
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
464.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
457.6
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
455.6
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
455.2
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
453.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
449.9
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
448.4
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
446.9
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
446.2
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
444.1
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
443.5
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
443.2
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
440.9
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
432.3
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
431.8
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
428.9
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
425.5
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
422.8
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
421.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
415.5
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
413.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
413.2
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
412.6
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
410.3
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
407.6
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
406.4
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
405.2
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
403.9
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
403.5
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
399.3
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
391.6
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
385.4
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
379.4
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
372.6
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
369.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
366.9
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
364.3
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
362.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
360.4
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
359.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
359.7
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
353.5
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
353.1
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
353.0
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
352.2
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
350.7
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
348.9
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
348.0
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
340.1
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
339.8
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
338.3
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
330.6
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
324.3
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
323.4
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
320.8
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
307.8
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
306.6
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
304.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
302.2
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
298.8
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
296.1
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
294.8
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
288.4
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
288.3
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
287.8
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
287.5
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
286.6
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
282.1
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
282.0
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
280.2
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
278.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
275.3
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
270.7
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
268.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
265.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
260.9
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
255.5
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
252.2
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
252.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
251.1
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
249.7
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
247.7
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
247.2
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
242.2
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
241.7
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
240.8
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
237.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
233.0
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
224.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
224.2
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
224.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
218.4
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
216.6
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
216.5
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
208.5
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
204.7
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
201.9
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
200.3
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
198.1
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
196.0
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
195.0
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
189.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
182.2
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
178.5
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
177.9
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
173.2
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
167.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
164.5
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
161.7
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
155.8
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
154.9
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
143.4
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
142.1
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
139.8
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
131.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
129.8
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
124.3
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
111.3
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
103.2
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
103.1
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
98.8
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
96.0
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
92.0
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
84.0
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
74.2
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
61.2
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
59.7
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
37.7
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
25.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
24.7
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 24.7
Samples: 4
Max nTPM: 34.1
Min nTPM: 17.1
Sample A
Male
29.5
Sample B
Male
34.1
Sample C
Female
18.2
Sample D
Female
17.1
Hippocampal formation nTPM: 19.6
Samples: 4
Max nTPM: 25.8
Min nTPM: 14.6
Sample A
Male
16.6
Sample B
Male
21.4
Sample C
Female
14.6
Sample D
Female
25.8
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.