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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLS3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
100.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
195.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
185.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
182.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
174.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
170.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
161.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
160.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
159.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
158.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
155.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
146.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
135.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
134.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
131.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
131.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
129.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
129.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
127.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
126.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
125.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
122.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
122.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
122.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
120.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
119.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
117.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
117.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
116.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
113.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
107.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
107.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
103.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
102.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
102.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
101.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
99.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
92.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
84.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
82.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
78.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
76.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
76.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
76.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
74.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
72.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
72.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
63.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
60.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
58.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
56.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
55.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
55.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
55.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
54.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
50.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
48.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
45.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
43.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
38.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
35.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
33.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
32.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
30.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLS3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
59.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
284.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
249.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
227.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
202.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
190.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
185.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
185.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
182.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
172.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
159.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
155.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
151.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
149.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
148.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
141.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
134.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
133.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
132.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
131.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
129.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
129.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
128.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
128.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
125.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
125.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
124.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
123.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
123.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
120.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
119.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
117.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
117.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
116.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
116.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
115.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
114.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
114.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
113.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
112.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
112.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
111.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
111.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
110.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
109.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
109.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
108.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
107.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
106.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
105.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
103.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
103.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
101.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
99.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
99.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
98.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
97.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
96.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
96.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
95.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
94.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
94.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
94.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
94.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
93.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
92.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
92.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
92.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
92.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
91.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
90.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
90.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
90.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
90.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
89.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
88.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
88.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
87.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
87.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
87.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
86.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
86.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
86.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
86.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
85.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
85.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
85.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
85.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
84.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
84.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
84.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
84.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
84.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
83.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
83.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
83.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
83.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
82.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
81.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
81.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
81.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
81.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
80.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
80.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
80.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
80.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
79.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
79.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
79.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
79.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
79.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
79.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
78.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
78.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
78.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
77.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
77.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
77.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
77.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
77.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
77.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
76.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
76.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
76.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
76.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
75.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
75.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
75.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
75.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
75.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
74.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
74.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
73.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
73.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
73.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
73.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
72.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
72.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
72.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
72.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
71.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
71.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
71.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
71.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
71.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
70.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
70.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
70.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
69.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
69.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
69.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
69.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
69.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
68.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
68.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
68.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
68.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
68.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
67.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
67.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
67.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
67.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
66.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
66.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
66.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
66.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
66.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
66.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
66.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
65.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
65.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
65.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
65.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
65.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
64.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
64.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
64.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
64.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
64.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
64.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
64.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
64.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
64.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
64.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
64.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
63.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
63.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
63.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
63.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
63.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
63.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
62.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
62.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
62.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
62.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
61.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
61.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
61.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
61.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
61.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
61.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
61.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
61.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
61.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
61.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
61.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
61.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
60.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
60.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
60.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
60.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
60.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
59.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
59.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
59.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
59.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
59.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
58.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
58.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
58.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
58.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
58.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
58.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
58.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
58.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
58.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
57.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
57.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
57.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
56.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
56.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
56.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
56.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
56.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
56.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
56.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
56.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
56.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
55.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
55.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
55.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
55.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
55.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
55.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
55.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
55.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
55.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
54.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
54.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
54.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
54.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
54.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
54.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
54.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
54.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
54.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
54.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
54.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
53.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
53.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
53.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
53.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
53.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
53.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
53.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
53.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
52.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
52.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
52.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
52.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
52.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
52.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
52.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
52.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
52.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
52.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
52.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
52.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
51.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
51.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
51.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
51.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
51.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
51.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
51.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
51.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
51.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
51.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
50.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
50.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
50.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
50.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
50.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
50.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
50.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
50.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
50.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
49.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
49.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
49.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
49.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
49.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
49.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
48.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
48.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
48.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
48.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
48.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
48.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
47.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
47.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
47.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
47.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
47.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
47.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
47.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
47.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
47.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
47.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
47.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
46.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
46.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
46.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
46.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
46.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
46.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
45.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
45.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
45.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
45.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
45.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
45.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
44.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
44.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
44.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
44.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
44.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
44.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
44.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
44.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
44.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
43.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
43.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
43.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
43.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
42.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
42.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
42.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
42.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
42.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
42.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
42.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
41.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
41.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
41.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
41.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
41.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
41.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
41.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
41.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
41.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
41.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
41.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
41.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
41.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
40.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
40.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
40.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
40.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
40.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
40.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
40.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
39.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
39.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
39.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
38.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
38.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
38.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
38.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
38.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
38.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
38.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
38.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
38.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
38.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
38.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
38.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
37.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
37.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
37.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
37.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
37.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
37.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
37.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
37.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
36.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
36.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
36.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
36.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
35.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
35.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
35.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
35.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
35.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
35.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
34.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
34.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
34.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
34.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
34.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
34.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
34.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
34.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
33.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
33.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
33.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
33.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
33.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
33.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
33.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
32.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
32.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
31.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
31.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
31.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
31.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
31.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
31.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
31.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
31.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
31.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
31.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
30.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
30.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
30.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
30.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
30.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
30.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
30.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
30.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
30.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
29.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
29.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
29.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
29.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
29.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
28.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
28.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
28.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
28.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
28.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
28.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
28.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
27.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
27.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
27.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
27.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
26.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
26.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
26.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
26.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
26.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
26.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
26.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
26.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
26.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
26.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
25.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
25.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
25.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
25.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
25.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
25.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
24.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
24.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
23.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
23.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
23.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
23.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
22.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
22.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
21.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
21.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
21.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
20.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
20.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
19.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
19.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
19.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
19.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
19.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
18.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
18.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
18.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
17.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
17.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
16.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
16.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
15.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
14.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
14.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
14.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
13.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
13.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
10.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
10.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
10.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLS3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
60.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
193.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
133.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
121.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
118.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
114.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
109.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
99.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
97.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
94.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
92.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
90.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
86.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
85.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
84.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
83.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
82.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
81.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
81.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
81.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
77.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
76.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
76.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
76.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
75.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
75.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
73.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
73.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
72.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
71.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
69.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
69.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
68.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
67.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
67.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
66.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
66.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
65.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
65.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
65.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
64.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
63.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
62.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
62.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
61.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
58.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
58.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
58.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
57.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
56.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
56.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
56.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
55.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
54.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
54.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
53.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
53.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
52.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
51.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
51.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
49.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
49.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
49.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
49.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
48.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
48.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
48.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
47.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
46.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
46.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
44.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
42.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
42.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
41.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
41.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
41.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
40.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
40.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
39.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
39.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
39.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
38.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
36.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
36.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
35.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
34.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
34.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
33.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
32.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
31.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
31.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
31.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
28.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
26.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
24.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
16.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
15.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLS3 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
232.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
190.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
183.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
165.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
136.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
135.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
132.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
128.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
123.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
120.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
117.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
108.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
107.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
103.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
98.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
97.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
95.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
95.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
93.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
90.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
87.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
81.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
80.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
80.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
80.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
80.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
79.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
79.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
77.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
75.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
70.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
70.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
69.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
67.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
67.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
63.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
62.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
61.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
61.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
60.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
60.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
59.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
57.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
56.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
54.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
54.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
53.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
53.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
53.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
52.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
52.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
52.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
52.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
50.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
48.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
48.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
47.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
45.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
44.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
43.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
42.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
42.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
42.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
42.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
42.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
41.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
41.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
40.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
40.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
39.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
39.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
38.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
38.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
37.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
37.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
37.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
36.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
36.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
36.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
35.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
35.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
35.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
35.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
34.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
34.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
34.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
34.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
34.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
34.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
34.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
33.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
33.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
33.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
33.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
33.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
32.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
31.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
31.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
31.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
30.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
30.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
30.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
29.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
29.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
29.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
29.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
29.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
28.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
27.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
27.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
27.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
27.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
27.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
27.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
27.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
27.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
27.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
26.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
26.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
26.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
25.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
25.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
25.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
25.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
25.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
25.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
25.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
24.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
24.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
24.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
24.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
24.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
24.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
24.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
23.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
23.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
23.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
22.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
22.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
22.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
21.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
21.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
21.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
21.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
20.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
20.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
20.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
20.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
20.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
20.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
20.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
20.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
20.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
20.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
20.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
20.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
20.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
19.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
19.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
19.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
19.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
19.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
19.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
19.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
18.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
18.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
18.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
18.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
18.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
17.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
17.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
17.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
17.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
17.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
17.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
17.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
17.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
17.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
17.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
17.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
16.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
16.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
16.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
16.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
16.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
15.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
15.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
15.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
15.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
15.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
15.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
15.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
15.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
15.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
15.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
14.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
13.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
13.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
13.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
13.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
13.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
13.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
13.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
12.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
12.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
12.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
11.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
11.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
11.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
10.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
10.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
10.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
10.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
10.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
10.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
9.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
9.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
9.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
9.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
9.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
9.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
8.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
8.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
8.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
7.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
7.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
7.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
7.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
5.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
5.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
5.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
5.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
4.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
4.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
4.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
4.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
3.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
3.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
2.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002270011
Tumor
1.1
CPT0084560003
Tumor
1.0
CPT0079510001
Normal
0.9
CPT0066480003
Tumor
0.7
CPT0079180003
Tumor
0.7
CPT0069190001
Normal
0.6
CPT0076350001
Normal
0.5
CPT0012640003
Normal
0.5
CPT0024680001
Normal
0.5
CPT0011240003
Tumor
0.5
CPT0006530001
Normal
0.5
CPT0021240003
Tumor
0.5
CPT0025060001
Normal
0.5
CPT0077320001
Normal
0.5
CPT0079300001
Normal
0.4
CPT0010120001
Normal
0.4
CPT0002370001
Normal
0.4
CPT0078660003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0007870001
Normal
0.4
CPT0069160003
Tumor
0.4
CPT0001350001
Normal
0.4
CPT0017850003
Tumor
0.4
CPT0009020003
Normal
0.4
CPT0084590001
Normal
0.4
CPT0012090003
Normal
0.4
CPT0025920001
Normal
0.4
CPT0001190001
Normal
0.4
CPT0066430001
Normal
0.4
CPT0092190003
Normal
0.4
CPT0012920003
Normal
0.4
CPT0000660001
Normal
0.3
CPT0086890003
Normal
0.3
CPT0001230001
Normal
0.3
CPT0012290003
Normal
0.3
CPT0066520001
Normal
0.3
CPT0012670003
Tumor
0.3
CPT0017450001
Normal
0.3
CPT0079430001
Normal
0.3
CPT0063640001
Normal
0.3
CPT0014470001
Normal
0.3
CPT0077500001
Normal
0.3
CPT0078940001
Normal
0.3
CPT0065450001
Normal
0.3
CPT0063330001
Normal
0.3
CPT0001550001
Normal
0.3
CPT0018250001
Normal
0.3
CPT0065820001
Normal
0.3
CPT0069010001
Normal
0.3
CPT0075570001
Normal
0.3
CPT0007470001
Normal
0.3
CPT0026420001
Normal
0.3
CPT0009080003
Normal
0.3
CPT0075170001
Normal
0.3
CPT0019160001
Normal
0.3
CPT0086830003
Normal
0.3
CPT0000890001
Normal
0.3
CPT0079000001
Normal
0.3
CPT0092310003
Normal
0.3
CPT0001510001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0001270001
Normal
0.2
CPT0088920001
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0077140001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0082010001
Normal
0.2
CPT0023360001
Normal
0.2
CPT0076330003
Tumor
0.2
CPT0086970003
Normal
0.2
CPT0010170001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0006730001
Normal
0.2
CPT0012770003
Normal
0.2
CPT0064400001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0025610001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0012570003
Normal
0.1
CPT0088630003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0013790003
Normal
0.1
CPT0020020001
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0015910003
Tumor
0.0
CPT0088550004
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0014350001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0063630003
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0020120003
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0012280003
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0077310003
Tumor
-0.3
CPT0026410003
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0069000003
Tumor
-0.3
CPT0079270003
Tumor
-0.3
CPT0088480003
Tumor
-0.3
CPT0065870003
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0014450004
Tumor
-0.3
CPT0001180009
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0086820003
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0065750003
Tumor
-0.3
CPT0012550003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0012180003
Tumor
-0.3
CPT0006900003
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0065810003
Tumor
-0.4
CPT0065430003
Tumor
-0.4
CPT0002350011
Tumor
-0.4
CPT0085670003
Tumor
-0.4
CPT0075130003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0010160003
Tumor
-0.4
CPT0001340003
Tumor
-0.5
CPT0086950003
Tumor
-0.5
CPT0065930003
Tumor
-0.5
CPT0015810003
Tumor
-0.5
CPT0007320003
Tumor
-0.5
CPT0077110003
Tumor
-0.5
CPT0025580004
Tumor
-0.5
CPT0064370003
Tumor
-0.5
CPT0092790003
Tumor
-0.5
CPT0079380003
Tumor
-0.5
CPT0063320003
Tumor
-0.5
CPT0078990003
Tumor
-0.5
CPT0000870016
Tumor
-0.5
CPT0010110003
Tumor
-0.5
CPT0001540009
Tumor
-0.5
CPT0092160003
Tumor
-0.5
CPT0006630003
Tumor
-0.5
CPT0011410003
Tumor
-0.6
CPT0014160003
Tumor
-0.6
CPT0014370004
Tumor
-0.6
CPT0079410003
Tumor
-0.6
CPT0012900004
Tumor
-0.6
CPT0019130003
Tumor
-0.6
CPT0071150004
Tumor
-0.7
CPT0086360003
Tumor
-0.7
CPT0009000003
Tumor
-0.7
CPT0001220008
Tumor
-0.7
CPT0089460004
Tumor
-0.7
CPT0001260009
Tumor
-0.7
CPT0012370003
Tumor
-0.7
CPT0078930003
Tumor
-0.8
CPT0006440003
Tumor
-0.8
CPT0009060003
Tumor
-0.8
CPT0025110003
Tumor
-0.8
CPT0078800003
Tumor
-0.9
CPT0078830003
Tumor
-0.9
CPT0001500009
Tumor
-1.0
CPT0015730003
Tumor
-1.0
CPT0088970003
Tumor
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.