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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
JAG1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
79.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
38.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
37.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
31.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
29.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
28.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
27.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
24.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
19.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
19.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
16.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
15.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
11.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
11.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
10.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
10.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
9.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
9.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
9.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
8.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
8.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
7.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
7.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
7.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
6.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
6.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
6.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
6.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
5.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
5.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
5.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
4.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
4.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
4.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
4.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
4.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
3.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
3.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
3.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
3.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
3.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
2.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
1.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
1.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
JAG1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
151.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
137.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
131.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
125.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
124.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
122.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
122.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
121.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
120.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
118.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
117.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
117.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
117.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
115.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
110.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
108.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
106.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
104.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
104.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
104.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
103.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
102.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
102.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
102.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
102.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
100.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
99.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
99.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
98.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
98.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
95.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
94.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
94.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
93.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
92.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
92.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
92.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
91.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
91.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
91.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
90.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
90.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
89.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
89.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
88.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
87.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
87.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
86.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
86.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
86.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
86.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
85.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
85.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
85.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
84.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
84.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
84.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
84.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
84.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
83.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
83.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
81.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
81.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
81.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
80.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
80.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
80.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
80.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
80.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
79.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
79.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
79.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
78.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
77.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
77.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
77.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
77.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
76.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
76.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
76.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
76.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
75.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
75.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
75.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
74.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
74.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
73.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
72.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
72.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
72.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
72.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
71.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
71.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
71.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
70.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
70.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
70.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
70.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
70.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
70.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
69.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
69.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
69.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
69.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
69.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
69.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
69.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
69.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
69.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
68.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
68.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
67.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
67.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
67.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
66.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
66.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
66.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
66.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
65.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
65.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
65.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
65.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
65.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
65.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
64.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
64.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
64.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
63.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
63.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
63.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
63.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
62.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
62.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
62.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
62.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
62.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
62.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
61.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
60.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
60.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
60.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
60.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
60.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
59.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
59.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
59.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
59.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
59.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
58.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
58.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
58.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
58.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
58.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
58.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
57.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
57.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
57.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
57.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
57.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
57.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
56.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
56.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
56.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
56.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
56.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
55.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
55.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
55.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
55.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
55.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
55.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
54.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
54.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
54.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
54.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
54.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
54.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
54.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
53.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
53.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
53.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
53.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
53.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
53.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
53.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
53.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
52.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
52.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
52.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
52.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
52.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
52.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
51.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
51.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
51.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
51.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
51.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
51.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
51.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
50.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
50.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
50.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
50.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
49.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
49.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
49.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
49.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
49.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
49.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
49.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
48.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
48.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
48.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
48.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
48.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
48.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
48.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
48.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
48.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
48.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
48.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
48.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
47.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
47.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
47.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
47.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
47.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
47.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
47.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
46.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
46.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
46.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
46.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
46.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
46.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
46.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
46.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
46.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
45.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
45.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
45.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
45.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
45.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
45.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
45.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
45.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
45.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
45.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
45.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
44.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
44.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
44.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
44.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
44.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
44.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
44.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
44.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
43.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
43.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
43.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
43.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
43.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
43.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
43.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
43.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
43.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
43.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
43.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
43.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
43.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
42.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
42.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
42.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
42.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
42.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
42.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
41.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
41.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
41.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
41.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
41.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
40.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
40.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
40.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
40.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
40.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
40.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
40.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
40.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
40.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
40.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
40.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
39.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
39.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
39.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
39.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
39.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
39.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
39.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
39.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
39.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
39.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
39.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
38.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
38.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
38.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
38.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
38.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
38.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
38.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
38.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
38.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
37.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
37.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
37.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
37.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
37.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
36.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
36.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
36.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
36.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
36.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
36.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
35.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
35.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
35.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
35.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
35.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
35.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
35.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
35.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
35.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
35.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
35.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
35.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
34.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
34.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
34.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
34.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
34.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
34.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
34.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
33.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
33.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
33.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
33.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
33.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
33.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
33.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
33.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
33.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
33.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
33.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
33.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
32.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
32.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
32.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
32.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
32.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
32.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
32.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
32.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
32.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
32.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
32.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
31.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
31.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
31.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
31.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
31.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
31.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
31.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
31.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
31.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
31.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
31.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
31.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
31.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
30.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
30.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
30.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
30.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
29.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
29.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
29.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
29.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
29.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
29.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
29.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
29.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
28.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
28.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
28.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
28.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
28.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
27.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
27.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
27.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
27.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
27.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
27.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
26.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
26.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
26.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
26.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
26.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
26.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
26.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
25.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
25.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
25.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
25.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
25.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
25.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
25.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
24.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
24.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
24.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
24.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
24.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
24.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
23.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
23.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
23.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
23.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
23.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
23.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
22.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
22.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
22.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
22.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
21.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
21.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
20.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
20.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
20.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
20.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
20.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
20.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
19.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
19.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
19.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
18.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
18.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
17.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
17.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
17.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
17.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
17.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
17.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
17.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
17.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
16.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
16.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
16.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
16.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
16.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
15.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
15.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
15.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
15.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
15.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
15.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
15.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
15.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
15.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
14.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
14.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
13.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
13.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
13.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
12.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
12.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
12.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
12.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
11.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
10.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
9.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
9.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
8.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
7.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
7.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
6.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
6.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
5.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
5.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
5.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
4.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
4.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
2.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
JAG1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
137.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
108.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
104.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
99.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
96.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
96.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
93.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
92.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
86.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
85.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
84.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
84.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
83.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
81.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
80.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
79.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
78.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
74.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
74.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
73.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
70.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
68.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
68.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
68.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
66.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
64.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
63.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
63.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
63.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
61.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
59.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
59.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
57.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
56.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
56.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
55.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
55.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
54.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
54.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
53.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
53.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
53.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
52.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
52.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
51.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
51.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
50.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
49.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
48.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
47.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
46.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
46.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
45.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
43.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
41.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
41.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
40.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
39.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
38.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
38.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
37.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
37.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
36.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
36.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
35.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
34.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
33.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
33.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
32.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
32.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
31.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
31.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
30.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
29.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
28.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
28.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
28.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
26.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
26.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
26.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
26.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
24.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
24.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
20.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
19.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
18.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
17.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
16.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
14.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
13.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
13.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
13.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
11.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
11.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
6.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
JAG1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
132.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
119.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
117.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
84.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
81.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
75.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
74.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
73.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
72.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
72.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
72.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
71.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
71.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
69.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
67.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
67.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
66.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
66.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
59.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
59.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
57.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
55.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
53.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
50.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
46.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
45.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
45.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
43.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
40.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
39.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
39.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
39.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
38.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
38.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
36.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
36.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
36.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
36.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
35.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
35.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
34.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
34.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
34.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
33.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
32.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
32.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
32.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
32.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
31.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
30.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
29.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
29.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
29.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
29.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
29.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
28.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
28.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
28.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
27.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
27.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
27.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
27.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
27.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
27.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
26.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
26.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
26.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
25.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
25.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
25.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
25.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
25.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
25.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
24.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
24.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
23.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
22.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
22.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
22.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
22.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
22.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
21.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
21.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
21.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
21.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
21.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
21.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
21.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
21.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
20.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
20.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
20.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
20.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
19.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
19.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
19.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
18.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
18.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
18.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
17.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
17.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
17.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
17.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
17.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
17.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
17.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
16.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
16.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
16.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
16.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
16.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
16.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
15.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
15.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
15.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
15.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
15.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
14.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
14.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
14.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
14.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
14.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
14.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
14.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
14.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
14.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
13.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
13.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
13.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
13.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
13.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
13.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
13.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
13.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
12.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
12.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
12.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
12.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
12.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
12.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
12.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
12.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
12.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
11.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
11.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
11.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
11.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
11.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
11.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
11.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
11.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
11.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
11.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
11.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
11.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
10.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
10.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
10.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
10.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
10.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
10.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
10.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
10.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
10.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
9.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
9.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
9.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
9.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
9.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
9.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
9.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
9.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
9.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
8.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
8.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
8.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
8.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
8.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
8.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
7.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
7.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
7.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
7.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
7.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
7.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
7.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
7.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
7.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
7.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
6.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
6.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
6.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
6.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
6.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
6.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
6.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
6.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
5.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
5.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
5.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
5.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
5.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
5.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
5.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
4.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
4.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
3.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
3.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
3.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
1.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
1.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
1.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
1.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0000640003
Tumor
1.6
CPT0077490003
Tumor
1.3
CPT0088630003
Tumor
1.2
CPT0076330003
Tumor
1.1
CPT0079480003
Tumor
1.0
CPT0012080003
Tumor
1.0
CPT0088900003
Tumor
1.0
CPT0025230003
Tumor
0.9
CPT0071150004
Tumor
0.9
CPT0009000003
Tumor
0.8
CPT0001260009
Tumor
0.8
CPT0092790003
Tumor
0.8
CPT0012370003
Tumor
0.8
CPT0063630003
Tumor
0.8
CPT0077110003
Tumor
0.8
CPT0025350003
Tumor
0.7
CPT0075720003
Tumor
0.7
CPT0065810003
Tumor
0.7
CPT0079270003
Tumor
0.7
CPT0088760003
Tumor
0.7
CPT0026410003
Tumor
0.7
CPT0006440003
Tumor
0.7
CPT0065870003
Tumor
0.7
CPT0088970003
Tumor
0.7
CPT0025880003
Tumor
0.7
CPT0085670003
Tumor
0.6
CPT0025580004
Tumor
0.6
CPT0086820003
Tumor
0.6
CPT0012670003
Tumor
0.5
CPT0065930003
Tumor
0.5
CPT0014370004
Tumor
0.5
CPT0000870016
Tumor
0.5
CPT0011240003
Tumor
0.5
CPT0079230003
Tumor
0.5
CPT0019130003
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0078830003
Tumor
0.5
CPT0086870003
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0015910003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0089020003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0081600003
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0075130003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0010110003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0086360003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0012640003
Normal
0.1
CPT0020020001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0000780007
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0084560003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0078660003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0000790001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0025290003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0011410003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0079180003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0077140001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0001180009
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0012920003
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0086890003
Normal
-0.3
CPT0001340003
Tumor
-0.3
CPT0088500001
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0000660001
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0081880003
Tumor
-0.3
CPT0088570001
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0012280003
Tumor
-0.3
CPT0007470001
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0019990003
Tumor
-0.3
CPT0025050003
Tumor
-0.3
CPT0092310003
Normal
-0.4
CPT0025610001
Normal
-0.4
CPT0066430001
Normal
-0.4
CPT0084590001
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0000890001
Normal
-0.4
CPT0006730001
Normal
-0.4
CPT0075570001
Normal
-0.4
CPT0082010001
Normal
-0.4
CPT0088710001
Normal
-0.4
CPT0078510003
Tumor
-0.4
CPT0009080003
Normal
-0.4
CPT0078800003
Tumor
-0.4
CPT0086830003
Normal
-0.4
CPT0086030003
Tumor
-0.4
CPT0086950003
Tumor
-0.4
CPT0092290003
Tumor
-0.5
CPT0092190003
Normal
-0.5
CPT0092160003
Tumor
-0.5
CPT0023710001
Normal
-0.5
CPT0006530001
Normal
-0.5
CPT0017450001
Normal
-0.5
CPT0089040001
Normal
-0.5
CPT0012090003
Normal
-0.5
CPT0025060001
Normal
-0.5
CPT0024680001
Normal
-0.5
CPT0086970003
Normal
-0.5
CPT0069160003
Tumor
-0.6
CPT0013790003
Normal
-0.6
CPT0010160003
Tumor
-0.6
CPT0078530001
Normal
-0.6
CPT0007860003
Tumor
-0.6
CPT0012290003
Normal
-0.6
CPT0010170001
Normal
-0.6
CPT0078840001
Normal
-0.6
CPT0014160003
Tumor
-0.6
CPT0012570003
Normal
-0.6
CPT0088550004
Tumor
-0.6
CPT0065820001
Normal
-0.6
CPT0020120003
Tumor
-0.6
CPT0086370003
Normal
-0.7
CPT0064400001
Normal
-0.7
CPT0088780001
Normal
-0.7
CPT0075560003
Tumor
-0.7
CPT0006630003
Tumor
-0.7
CPT0089460004
Tumor
-0.7
CPT0066470004
Tumor
-0.8
CPT0079380003
Tumor
-0.8
CPT0092800003
Normal
-0.8
CPT0018250001
Normal
-0.8
CPT0024670003
Tumor
-0.9
CPT0023690003
Tumor
-1.1
CPT0078930003
Tumor
-1.1
CPT0065750003
Tumor
-1.1
CPT0015730003
Tumor
-2.1
CPT0087040003
Tumor
N/A
CPT0002270011
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0077320001
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0087050003
Normal
N/A
CPT0079430001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
