HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:48.0 nTPM
HPA Brain:48.3 nTPM
GTEx:48.0 nTPM
FANTOM5:56.4 Scaled Tags Per Million
Pig:56.0 nTPM
Mouse:270.5 nTPM
Allen mouse:13.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049387
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 48.3
Sample id Sample description nTPM
Hippocampus
nTPM: 38.9
1898 Male, age 80, left hemisphere 49.1
2621 Female, age 67, right hemisphere 42.2
1855 Male, age 76, left hemisphere 38.6
2529 Female, age 94, left hemisphere 38.1
1911 Female, age 85, right hemisphere 33.0
2148 Female, age 91, left hemisphere 32.3
Dentate gyrus
nTPM: 38.1
1927 Female, age 91, both hemispheres 42.3
2530 Female, age 94, left hemisphere 42.2
2010 Male, age 76, both hemispheres 41.9
2528 Male, age 74, both hemispheres 34.0
2531 Female, age 67, both hemispheres 34.0
2246 Female, age 85, both hemispheres 33.9
Entorhinal gyrus
nTPM: 39.6
2764 Male, age 80, right hemisphere 47.6
1938 Female, age 85, left hemisphere 42.1
1787 Male, age 76, left hemisphere 39.5
2117 Female, age 91, right hemisphere 37.4
2613 Female, age 94, left hemisphere 36.4
2686 Male, age 75, right hemisphere 34.8
Hippocampus, CA1
nTPM: 41.3
2749 Male, age 80, left hemisphere 58.3
2527 Male, age 74, both hemispheres 40.0
1873 Female, age 85, both hemispheres 39.4
2045 Male, age 76, both hemispheres 36.3
2082 Female, age 91, right hemisphere 32.5
Hippocampus, CA2
nTPM: 40.2
1892 Male, age 76, both hemispheres 53.7
1963 Male, age 80, left hemisphere 42.5
2249 Male, age 74, both hemispheres 40.6
2437 Female, age 94, left hemisphere 38.1
1940 Female, age 85, left hemisphere 35.0
2113 Female, age 91, right hemisphere 31.5
Hippocampus, CA3
nTPM: 39.3
1867 Male, age 76, both hemispheres 48.9
2137 Male, age 80, left hemisphere 45.8
2436 Male, age 74, both hemispheres 39.5
1891 Female, age 85, both hemispheres 36.9
2620 Female, age 94, left hemisphere 35.0
2861 Female, age 67, both hemispheres 29.6
Parahippocampal cortex
nTPM: 39.7
1850 Male, age 80, both hemispheres 52.3
1990 Female, age 91, right hemisphere 45.9
2250 Female, age 67, right hemisphere 41.2
1933 Female, age 85, both hemispheres 40.7
2245 Female, age 91, both hemispheres 40.6
2532 Female, age 72, left hemisphere 39.1
2018 Male, age 76, both hemispheres 38.0
2693 Female, age 94, both hemispheres 34.2
2692 Male, age 74, both hemispheres 34.0
2622 Female, age 67, right hemisphere 30.9
Perirhinal gyrus
nTPM: 48.3
1847 Female, age 91, left hemisphere 55.7
1794 Male, age 80, right hemisphere 51.0
1841 Female, age 85, right hemisphere 46.8
2521 Female, age 94, right hemisphere 45.1
2848 Male, age 76, right hemisphere 42.7
Subiculum
nTPM: 37.5
1901 Male, age 80, both hemispheres 44.7
1977 Female, age 85, both hemispheres 41.9
2042 Male, age 76, both hemispheres 37.2
2619 Male, age 74, both hemispheres 35.5
2438 Female, age 94, left hemisphere 34.3
2729 Female, age 91, right hemisphere 31.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 48.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.0
Samples: 197

Max nTPM: 82.7
Min nTPM: 27.3
Std nTPM: 11.5
Median nTPM: 45.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 82.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 80.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 79.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 79.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 75.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 74.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 74.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 73.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 73.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 70.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 70.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 56.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.4
FF:10169-103B7 60 years, female 63.3
FF:10153-102I9 76 years, female 49.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 56.0
Pig sample Sample description nTPM
Subiculum
nTPM: 48.2
Samples: 4

Max nTPM: 58.5
Min nTPM: 42.2
Sample A Female 58.5
Sample B Female 45.8
Sample C Male 46.3
Sample D Male 42.2
Dorsal hippocampus
nTPM: 56.0
Samples: 4

Max nTPM: 68.5
Min nTPM: 42.0
Sample A Female 68.5
Sample B Female 58.5
Sample C Male 54.8
Sample D Male 42.0
Entorhinal cortex
nTPM: 53.0
Samples: 4

Max nTPM: 60.4
Min nTPM: 46.0
Sample A Female 56.7
Sample B Female 60.4
Sample C Male 48.9
Sample D Male 46.0
Ventral hippocampus
nTPM: 55.8
Samples: 4

Max nTPM: 66.8
Min nTPM: 39.4
Sample A Female 60.9
Sample B Female 39.4
Sample C Male 66.8
Sample D Male 56.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 270.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 241.2
Samples: 4

Max nTPM: 258.9
Min nTPM: 211.3
Sample A Male 238.5
Sample B Male 258.9
Sample C Female 255.9
Sample D Female 211.3
Hippocampal formation
nTPM: 270.6
Samples: 4

Max nTPM: 303.5
Min nTPM: 247.1
Sample A Male 303.5
Sample B Male 263.4
Sample C Female 247.1
Sample D Female 268.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 13.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.6
81600142 Antisense, RP_080313_02_E10, Mouse strain C57BL/6J (56 days, male) 16.0
69735210 Antisense, RP_050503_02_C10, Mouse strain C57BL/6J (56 days, male) 11.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org