We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HM13 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
85.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
366.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
274.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
269.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
242.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
241.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
240.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
206.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
197.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
195.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
194.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
191.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
190.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
187.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
185.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
182.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
182.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
181.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
180.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
173.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
173.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
170.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
166.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
164.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
164.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
162.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
161.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
158.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
158.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
154.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
152.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
152.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
152.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
152.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
151.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
150.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
150.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
149.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
149.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
147.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
147.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
147.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
146.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
145.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
145.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
145.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
144.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
144.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
141.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
139.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
139.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
139.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
137.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
134.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
133.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
132.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
131.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
131.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
130.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
128.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
128.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
128.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
127.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
124.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
124.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
123.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
123.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
122.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
122.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
120.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
119.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
119.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
118.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
118.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
118.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
118.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
117.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
117.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
117.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
117.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
117.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
116.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
116.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
115.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
115.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
114.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
114.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
114.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
114.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
113.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
113.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
113.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
113.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
113.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
112.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
112.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
112.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
112.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
111.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
111.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
111.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
111.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
109.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
108.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
108.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
107.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
106.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
105.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
105.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
105.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
104.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
103.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
103.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
102.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
102.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
101.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
101.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
101.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
99.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
99.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
99.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
98.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
98.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
97.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
97.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
96.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
96.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
96.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
95.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
95.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
95.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
95.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
95.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
95.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
94.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
93.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
92.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
92.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
92.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
91.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
91.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
91.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
90.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
90.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
90.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
90.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
90.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
89.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
89.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
89.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
89.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
89.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
88.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
88.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
87.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
87.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
87.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
86.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
86.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
86.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
86.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
85.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
85.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
85.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
85.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
85.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
84.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
83.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
83.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
82.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
82.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
81.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
81.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
81.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
81.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
80.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
80.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
80.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
79.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
79.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
78.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
78.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
77.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
77.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
77.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
76.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
76.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
76.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
76.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
75.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
74.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
73.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
73.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
73.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
73.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
72.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
72.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
72.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
72.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
72.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
71.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
71.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
70.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
70.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
70.5
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
70.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
70.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
70.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
70.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
69.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
69.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
69.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
69.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
68.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
68.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
68.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
68.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
68.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
67.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
67.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
67.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
67.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
67.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
67.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
66.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
66.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
66.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
66.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
66.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
65.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
65.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
65.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
65.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
65.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
65.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
65.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
63.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
63.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
63.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
63.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
62.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
62.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
62.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
62.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
61.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
61.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
61.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
60.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
60.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
60.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
60.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
60.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
59.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
59.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
59.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
59.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
58.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
57.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
57.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
57.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
57.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
56.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
56.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
56.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
55.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
54.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
54.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
53.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
53.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
53.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
52.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
52.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
52.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
52.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
51.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
51.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
49.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
49.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
49.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
49.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
47.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
47.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
46.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
46.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
45.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
45.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
44.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
44.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
44.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
44.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
44.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
44.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
43.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
43.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
43.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
42.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
42.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
42.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
42.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
41.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
40.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
40.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
40.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
39.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
38.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
37.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
36.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
36.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
36.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
35.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
34.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
34.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
33.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
33.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
32.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
32.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
31.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
31.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
31.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
30.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
27.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
27.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
27.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
26.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
25.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
25.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
24.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
24.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
22.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
21.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
21.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
20.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
20.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
20.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
20.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
18.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
17.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
16.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
16.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
15.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
14.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
14.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
12.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
11.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
10.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
9.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
9.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
8.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
8.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
6.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
5.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
4.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
3.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HM13 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
96.8
Number of samples
231
Samples
Sample
Description
TPM
DO45127
0 years, male, NA, stage:3, dead, 420 days
271.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
244.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
226.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
206.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
198.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
194.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
186.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
186.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
184.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
183.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
170.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
167.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
163.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
163.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
162.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
160.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
159.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
158.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
157.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
155.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
151.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
150.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
149.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
147.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
145.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
143.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
142.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
141.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
140.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
138.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
137.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
137.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
136.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
136.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
136.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
135.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
132.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
132.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
132.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
130.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
129.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
128.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
127.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
127.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
125.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
124.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
122.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
122.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
121.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
119.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
118.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
118.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
117.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
117.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
117.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
116.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
116.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
116.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
114.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
114.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
113.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
113.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
112.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
111.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
110.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
110.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
110.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
109.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
108.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
106.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
106.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
105.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
105.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
105.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
105.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
104.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
103.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
103.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
103.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
101.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
101.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
101.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
100.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
100.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
100.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
99.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
99.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
98.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
98.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
97.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
97.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
97.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
97.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
96.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
96.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
96.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
96.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
96.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
95.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
95.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
94.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
94.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
94.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
93.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
93.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
93.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
93.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
93.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
93.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
92.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
92.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
91.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
91.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
91.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
91.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
90.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
90.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
90.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
89.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
89.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
89.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
88.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
87.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
87.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
87.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
87.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
86.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
86.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
86.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
86.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
86.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
86.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
86.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
86.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
85.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
85.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
85.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
84.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
83.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
83.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
83.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
82.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
80.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
80.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
80.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
80.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
79.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
79.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
79.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
78.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
78.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
78.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
78.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
77.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
77.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
77.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
76.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
76.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
76.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
76.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
75.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
75.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
74.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
74.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
73.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
73.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
72.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
72.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
71.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
71.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
71.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
71.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
71.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
70.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
69.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
69.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
69.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
69.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
68.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
68.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
67.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
67.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
67.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
66.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
65.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
65.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
65.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
64.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
63.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
63.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
63.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
62.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
62.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
61.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
61.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
61.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
61.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
60.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
58.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
57.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
56.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
56.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
56.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
54.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
54.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
54.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
54.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
53.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
53.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
51.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
51.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
50.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
50.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
50.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
49.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
49.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
49.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
49.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
48.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
47.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
47.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
47.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
47.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
45.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
43.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
41.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
41.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
40.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
38.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
35.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
31.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
123
Tumor
1.2
357
Tumor
1.0
171
Tumor
1.0
851
Tumor
0.9
223
Tumor
0.9
435
Tumor
0.8
647
Tumor
0.8
567
Tumor
0.7
1013
Tumor
0.7
527
Tumor
0.7
724
Normal
0.7
351
Tumor
0.7
923
Tumor
0.6
147
Tumor
0.6
331
Tumor
0.6
745
Tumor
0.6
635
Tumor
0.6
571
Tumor
0.6
713
Tumor
0.6
967
Tumor
0.5
1021
Tumor
0.5
883
Tumor
0.5
525
Tumor
0.5
227
Tumor
0.5
865
Tumor
0.5
815
Tumor
0.5
573
Tumor
0.5
135
Tumor
0.4
983
Tumor
0.4
743
Tumor
0.4
413
Tumor
0.4
363
Tumor
0.4
411
Tumor
0.4
367
Tumor
0.4
697
Tumor
0.4
537
Tumor
0.4
211
Tumor
0.3
963
Tumor
0.3
217
Tumor
0.3
277
Tumor
0.3
685
Tumor
0.3
665
Tumor
0.3
913
Tumor
0.3
145
Tumor
0.3
937
Tumor
0.3
383
Tumor
0.3
431
Tumor
0.2
311
Tumor
0.2
355
Tumor
0.2
375
Tumor
0.2
557
Tumor
0.2
451
Tumor
0.2
443
Tumor
0.2
915
Tumor
0.2
727
Tumor
0.2
283
Tumor
0.2
953
Tumor
0.2
1015
Tumor
0.2
857
Tumor
0.2
497
Tumor
0.2
395
Tumor
0.2
353
Tumor
0.2
433
Tumor
0.2
187
Tumor
0.1
125
Tumor
0.1
1025
Tumor
0.1
445
Tumor
0.1
285
Tumor
0.1
1045
Tumor
0.1
261
Tumor
0.1
1027
Tumor
0.1
863
Tumor
0.1
327
Tumor
0.1
861
Tumor
0.1
387
Tumor
0.1
483
Tumor
0.1
447
Tumor
0.1
491
Tumor
0.1
185
Tumor
0.1
617
Tumor
0.1
385
Tumor
0.1
1014
Normal
0.1
455
Tumor
0.0
925
Tumor
0.0
535
Tumor
0.0
721
Tumor
0.0
465
Tumor
0.0
1043
Tumor
0.0
213
Tumor
0.0
137
Tumor
0.0
493
Tumor
0.0
978
Normal
0.0
467
Tumor
0.0
341
Tumor
0.0
671
Tumor
0.0
267
Tumor
0.0
1026
Normal
0.0
515
Tumor
0.0
477
Tumor
0.0
917
Tumor
0.0
944
Normal
0.0
113
Tumor
0.0
817
Tumor
0.0
517
Tumor
0.0
415
Tumor
0.0
191
Tumor
-0.1
221
Tumor
-0.1
641
Tumor
-0.1
881
Tumor
-0.1
955
Tumor
-0.1
195
Tumor
-0.1
558
Normal
-0.1
421
Tumor
-0.1
661
Tumor
-0.1
536
Normal
-0.1
1044
Normal
-0.1
473
Tumor
-0.1
977
Tumor
-0.1
284
Normal
-0.1
393
Tumor
-0.1
313
Tumor
-0.1
912
Normal
-0.1
563
Tumor
-0.1
481
Tumor
-0.1
984
Normal
-0.1
777
Tumor
-0.1
368
Normal
-0.1
314
Normal
-0.1
965
Tumor
-0.1
873
Tumor
-0.1
1031
Tumor
-0.1
938
Normal
-0.1
785
Tumor
-0.1
975
Tumor
-0.1
813
Tumor
-0.1
572
Normal
-0.1
126
Normal
-0.1
427
Tumor
-0.1
1042
Normal
-0.1
463
Tumor
-0.1
228
Normal
-0.1
545
Tumor
-0.1
356
Normal
-0.1
943
Tumor
-0.1
332
Normal
-0.1
391
Tumor
-0.1
278
Normal
-0.2
494
Normal
-0.2
976
Normal
-0.2
161
Tumor
-0.2
663
Tumor
-0.2
615
Tumor
-0.2
212
Normal
-0.2
921
Tumor
-0.2
964
Normal
-0.2
452
Normal
-0.2
728
Normal
-0.2
814
Normal
-0.2
574
Normal
-0.2
981
Tumor
-0.2
568
Normal
-0.2
412
Normal
-0.2
636
Normal
-0.2
918
Normal
-0.2
911
Tumor
-0.2
262
Normal
-0.2
466
Normal
-0.2
188
Normal
-0.2
112
Tumor
-0.2
823
Tumor
-0.2
648
Normal
-0.2
696
Normal
-0.2
523
Tumor
-0.2
271
Tumor
-0.2
471
Tumor
-0.2
1016
Normal
-0.2
966
Normal
-0.2
956
Normal
-0.2
737
Tumor
-0.2
864
Normal
-0.2
224
Normal
-0.2
528
Normal
-0.2
524
Normal
-0.2
723
Tumor
-0.2
328
Normal
-0.2
142
Normal
-0.2
868
Normal
-0.2
878
Normal
-0.2
534
Normal
-0.2
866
Normal
-0.2
1041
Tumor
-0.2
434
Normal
-0.2
232
Normal
-0.2
492
Normal
-0.2
1032
Normal
-0.2
365
Tumor
-0.2
392
Normal
-0.2
186
Normal
-0.2
286
Normal
-0.2
914
Normal
-0.3
1022
Normal
-0.3
513
Tumor
-0.3
526
Normal
-0.3
487
Tumor
-0.3
698
Normal
-0.3
298
Normal
-0.3
514
Normal
-0.3
564
Normal
-0.3
877
Tumor
-0.3
257
Tumor
-0.3
862
Normal
-0.3
231
Tumor
-0.3
958
Normal
-0.3
867
Tumor
-0.3
554
Normal
-0.3
1028
Normal
-0.3
312
Normal
-0.3
258
Normal
-0.3
952
Normal
-0.3
461
Tumor
-0.3
488
Normal
-0.3
533
Tumor
-0.3
722
Normal
-0.3
742
Normal
-0.3
662
Normal
-0.3
968
Normal
-0.3
297
Tumor
-0.3
498
Normal
-0.3
124
Normal
-0.3
468
Normal
-0.3
352
Normal
-0.3
738
Normal
-0.3
916
Normal
-0.3
478
Normal
-0.3
416
Normal
-0.3
446
Normal
-0.3
268
Normal
-0.3
384
Normal
-0.3
672
Normal
-0.3
686
Normal
-0.3
132
Normal
-0.3
362
Normal
-0.3
148
Normal
-0.3
874
Normal
-0.3
361
Tumor
-0.3
954
Normal
-0.3
364
Normal
-0.3
982
Normal
-0.3
111
Normal
-0.3
272
Normal
-0.3
376
Normal
-0.3
172
Normal
-0.3
922
Normal
-0.3
755
Tumor
-0.3
741
Tumor
-0.4
474
Normal
-0.4
448
Normal
-0.4
546
Normal
-0.4
786
Normal
-0.4
388
Normal
-0.4
1046
Normal
-0.4
642
Normal
-0.4
957
Tumor
-0.4
464
Normal
-0.4
926
Normal
-0.4
518
Normal
-0.4
343
Tumor
-0.4
354
Normal
-0.4
358
Normal
-0.4
852
Normal
-0.4
627
Tumor
-0.4
366
Normal
-0.4
456
Normal
-0.4
462
Normal
-0.4
664
Normal
-0.4
414
Normal
-0.4
884
Normal
-0.4
628
Normal
-0.4
714
Normal
-0.4
666
Normal
-0.4
146
Normal
-0.4
482
Normal
-0.4
744
Normal
-0.4
136
Normal
-0.4
138
Normal
-0.4
114
Normal
-0.4
127
Tumor
-0.4
396
Normal
-0.4
444
Normal
-0.4
484
Normal
-0.4
432
Normal
-0.4
882
Normal
-0.4
816
Normal
-0.4
715
Tumor
-0.4
716
Normal
-0.4
162
Normal
-0.4
553
Tumor
-0.4
538
Normal
-0.5
425
Tumor
-0.5
422
Normal
-0.5
778
Normal
-0.5
616
Normal
-0.5
618
Normal
-0.5
951
Tumor
-0.5
423
Tumor
-0.5
128
Normal
-0.5
426
Normal
-0.5
436
Normal
-0.5
196
Normal
-0.5
394
Normal
-0.5
746
Normal
-0.5
424
Normal
-0.5
386
Normal
-0.5
344
Normal
-0.5
218
Normal
-0.5
695
Tumor
-0.5
472
Normal
-0.5
214
Normal
-0.5
756
Normal
-0.5
342
Normal
-0.5
516
Normal
-0.6
141
Tumor
-0.6
924
Normal
-0.6
428
Normal
-0.6
192
Normal
-0.6
222
Normal
-0.6
818
Normal
-0.6
131
Tumor
-0.6
858
Normal
-0.7
824
Normal
-0.7
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
