HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:21.9 nTPM
HPA Brain:25.6 nTPM
GTEx:21.9 nTPM
FANTOM5:45.3 Scaled Tags Per Million
Pig:4.3 nTPM
Mouse:5.9 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038892Antibody HPA038893
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 25.6
Sample id Sample description nTPM
Hippocampus
nTPM: 21.7
2529 Female, age 94, left hemisphere 24.6
1898 Male, age 80, left hemisphere 22.6
2621 Female, age 67, right hemisphere 22.4
2148 Female, age 91, left hemisphere 20.8
1911 Female, age 85, right hemisphere 20.6
1855 Male, age 76, left hemisphere 19.1
Dentate gyrus
nTPM: 22.4
2528 Male, age 74, both hemispheres 24.9
2530 Female, age 94, left hemisphere 24.7
2010 Male, age 76, both hemispheres 22.4
2246 Female, age 85, both hemispheres 22.1
2531 Female, age 67, both hemispheres 21.9
1927 Female, age 91, both hemispheres 18.6
Entorhinal gyrus
nTPM: 25.6
2686 Male, age 75, right hemisphere 32.6
2764 Male, age 80, right hemisphere 28.5
2117 Female, age 91, right hemisphere 27.2
2613 Female, age 94, left hemisphere 24.1
1787 Male, age 76, left hemisphere 23.1
1938 Female, age 85, left hemisphere 17.8
Hippocampus, CA1
nTPM: 19.3
2082 Female, age 91, right hemisphere 23.3
2527 Male, age 74, both hemispheres 22.6
1873 Female, age 85, both hemispheres 21.0
2749 Male, age 80, left hemisphere 17.1
2045 Male, age 76, both hemispheres 12.6
Hippocampus, CA2
nTPM: 23.4
2437 Female, age 94, left hemisphere 27.4
1963 Male, age 80, left hemisphere 25.9
1940 Female, age 85, left hemisphere 24.6
2113 Female, age 91, right hemisphere 22.4
2249 Male, age 74, both hemispheres 22.4
1892 Male, age 76, both hemispheres 17.5
Hippocampus, CA3
nTPM: 21.7
2861 Female, age 67, both hemispheres 26.7
1891 Female, age 85, both hemispheres 24.6
2620 Female, age 94, left hemisphere 22.3
2137 Male, age 80, left hemisphere 19.2
1867 Male, age 76, both hemispheres 19.1
2436 Male, age 74, both hemispheres 18.3
Parahippocampal cortex
nTPM: 25.6
2622 Female, age 67, right hemisphere 31.0
2693 Female, age 94, both hemispheres 27.7
2532 Female, age 72, left hemisphere 27.6
2692 Male, age 74, both hemispheres 27.1
2250 Female, age 67, right hemisphere 26.1
1990 Female, age 91, right hemisphere 25.6
1850 Male, age 80, both hemispheres 24.1
2245 Female, age 91, both hemispheres 23.1
1933 Female, age 85, both hemispheres 22.3
2018 Male, age 76, both hemispheres 21.4
Perirhinal gyrus
nTPM: 22.8
2521 Female, age 94, right hemisphere 25.8
1794 Male, age 80, right hemisphere 23.6
2848 Male, age 76, right hemisphere 21.7
1847 Female, age 91, left hemisphere 21.6
1841 Female, age 85, right hemisphere 21.5
Subiculum
nTPM: 25.6
2042 Male, age 76, both hemispheres 31.9
2619 Male, age 74, both hemispheres 28.0
2438 Female, age 94, left hemisphere 24.4
1977 Female, age 85, both hemispheres 23.5
1901 Male, age 80, both hemispheres 23.2
2729 Female, age 91, right hemisphere 22.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 21.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.9
Samples: 197

Max nTPM: 42.5
Min nTPM: 8.6
Std nTPM: 5.0
Median nTPM: 21.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 42.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 41.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 39.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 37.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 37.1
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 36.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 34.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 32.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 31.5
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 30.8
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 30.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 45.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.3
FF:10153-102I9 76 years, female 61.6
FF:10169-103B7 60 years, female 29.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 4.3
Pig sample Sample description nTPM
Subiculum
nTPM: 4.3
Samples: 4

Max nTPM: 5.0
Min nTPM: 3.2
Sample A Female 4.8
Sample B Female 3.2
Sample C Male 4.2
Sample D Male 5.0
Dorsal hippocampus
nTPM: 3.2
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.7
Sample A Female 3.2
Sample B Female 2.7
Sample C Male 3.1
Sample D Male 3.7
Entorhinal cortex
nTPM: 3.8
Samples: 4

Max nTPM: 5.1
Min nTPM: 2.7
Sample A Female 4.6
Sample B Female 2.8
Sample C Male 5.1
Sample D Male 2.7
Ventral hippocampus
nTPM: 3.8
Samples: 4

Max nTPM: 5.1
Min nTPM: 3.1
Sample A Female 3.1
Sample B Female 3.2
Sample C Male 5.1
Sample D Male 3.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 5.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.9
Samples: 4

Max nTPM: 6.9
Min nTPM: 4.5
Sample A Male 6.6
Sample B Male 6.9
Sample C Female 5.5
Sample D Female 4.5
Hippocampal formation
nTPM: 5.6
Samples: 4

Max nTPM: 7.2
Min nTPM: 4.5
Sample A Male 7.2
Sample B Male 6.1
Sample C Female 4.5
Sample D Female 4.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
71656803 Antisense, RP_050927_04_D02, Mouse strain C57BL/6J (56 days, male) 1.7
74274686 Antisense, RP_050927_04_D02, Mouse strain C57BL/6J (56 days, male) 0.7

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