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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
540.4
nTPM
FANTOM5:
327.0
Scaled Tags Per Million
Pig:
737.9
nTPM
Allen mouse:
15.5
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
540.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 216.9
1984
Male, age 76, both hemispheres
324.2
2301
Female, age 85, both hemispheres
233.3
2188
Female, age 91, both hemispheres
185.6
2090
Male, age 80, both hemispheres
124.3
Dorsal cochlear nucleus nTPM: 186.7
2187
Female, age 91, both hemispheres
231.7
2058
Male, age 76, both hemispheres
223.1
2370
Male, age 61, both hemispheres
187.6
2802
Male, age 74, right hemisphere
156.5
2378
Male, age 80, both hemispheres
134.5
Dorsal tegmental nucleus nTPM: 219.7
2083
Male, age 80, both hemispheres
281.2
1936
Male, age 76, left hemisphere
255.1
2358
Male, age 61, both hemispheres
205.3
2326
Male, age 74, both hemispheres
137.4
Dorsolateral tegmental area nTPM: 198.7
2654
Male, age 80, both hemispheres
261.1
2141
Male, age 76, both hemispheres
253.4
2751
Female, age 85, both hemispheres
246.1
2360
Male, age 74, both hemispheres
130.1
2337
Male, age 61, both hemispheres
102.7
Kolliker-Fuse nucleus nTPM: 303.4
2163
Male, age 80, both hemispheres
461.4
2793
Female, age 91, left hemisphere
288.3
2315
Male, age 76, right hemisphere
160.5
Lateral lemniscal nuclei nTPM: 424.8
2169
Male, age 76, both hemispheres
554.5
2453
Male, age 74, right hemisphere
540.1
2746
Female, age 85, left hemisphere
417.6
2036
Male, age 80, both hemispheres
315.0
2320
Female, age 91, left hemisphere
296.6
Lateral parabrachial nucleus nTPM: 270.4
2139
Female, age 85, right hemisphere
481.1
2790
Male, age 61, both hemispheres
267.1
2013
Male, age 80, both hemispheres
244.6
2792
Male, age 76, both hemispheres
88.6
Lateral vestibular nucleus nTPM: 345.5
2184
Male, age 76, both hemispheres
474.0
2311
Male, age 80, both hemispheres
217.0
Locus coeruleus nTPM: 425.5
2123
Female, age 91, both hemispheres
681.3
2720
Male, age 74, both hemispheres
594.8
1980
Male, age 76, both hemispheres
398.6
2014
Male, age 55, unknown
388.4
2317
Female, age 72, unknown
352.3
2162
Male, age 80, both hemispheres
349.9
2788
Male, age 74, unknown
213.2
Medial parabrachial nucleus nTPM: 289.0
2156
Male, age 61, both hemispheres
337.5
2854
Male, age 80, both hemispheres
305.7
2170
Female, age 91, both hemispheres
283.6
2463
Female, age 85, right hemisphere
265.8
2786
Male, age 76, both hemispheres
252.4
Medial periolivary nuclei nTPM: 393.9
2171
Female, age 85, both hemispheres
661.8
2063
Male, age 76, both hemispheres
547.2
2791
Male, age 74, right hemisphere
329.8
2458
Female, age 91, both hemispheres
219.5
2081
Male, age 80, both hemispheres
211.0
Motor facial nucleus nTPM: 412.0
2062
Male, age 76, both hemispheres
627.8
2365
Male, age 74, right hemisphere
464.3
2327
Male, age 80, both hemispheres
415.7
2697
Female, age 85, both hemispheres
392.6
2795
Female, age 91, both hemispheres
297.5
2126
Male, age 61, both hemispheres
274.3
Motor trigeminal nucleus nTPM: 307.0
2560
Male, age 74, both hemispheres
383.3
2079
Male, age 80, both hemispheres
377.4
2335
Male, age 61, both hemispheres
289.6
2309
Male, age 76, both hemispheres
268.4
2321
Female, age 91, both hemispheres
216.4
Nuclei of the trapezoid body nTPM: 491.6
2159
Male, age 61, both hemispheres
651.1
2735
Female, age 85, both hemispheres
638.0
1983
Male, age 76, both hemispheres
585.2
2166
Male, age 80, both hemispheres
325.1
2368
Female, age 91, both hemispheres
258.4
Nucleus raphe magnus nTPM: 540.4
2160
Male, age 61, both hemispheres
770.7
2172
Female, age 85, both hemispheres
717.6
2455
Male, age 74, both hemispheres
661.1
2051
Male, age 76, both hemispheres
444.4
2328
Male, age 80, both hemispheres
389.2
2459
Female, age 91, both hemispheres
259.2
Paramedian reticular nucleus nTPM: 356.9
2050
Female, age 85, both hemispheres
493.3
2313
Male, age 61, both hemispheres
404.8
2057
Male, age 80, both hemispheres
356.5
2052
Male, age 76, both hemispheres
172.8
Pedunculopontine tegmental nucleus nTPM: 248.2
1921
Female, age 85, both hemispheres
278.9
2334
Male, age 80, both hemispheres
265.3
2338
Male, age 61, both hemispheres
200.4
Pontine nuclei nTPM: 484.5
2787
Female, age 85, both hemispheres
817.7
2727
Male, age 61, right hemisphere
644.1
1968
Male, age 76, left hemisphere
579.6
1863
Male, age 55, unknown
521.2
2109
Female, age 72, unknown
465.3
2454
Male, age 74, left hemisphere
318.5
2115
Male, age 80, left hemisphere
292.4
2319
Female, age 91, both hemispheres
236.9
Pontine raphe nucleus nTPM: 344.0
2122
Female, age 85, midline
403.6
2853
Male, age 76, midline
284.5
Posteroventral cochlear nucleus nTPM: 191.3
2752
Female, age 85, both hemispheres
378.4
2070
Male, age 76, both hemispheres
265.4
2371
Male, age 61, both hemispheres
179.5
2341
Male, age 80, both hemispheres
83.9
2135
Female, age 91, both hemispheres
49.5
Principal sensory trigeminal nucleus nTPM: 442.1
2158
Male, age 61, both hemispheres
682.1
2008
Male, age 80, left hemisphere
449.8
2324
Male, age 76, both hemispheres
396.4
2367
Female, age 91, left hemisphere
239.9
Reticular pontine nucleus, caudal nTPM: 321.6
2332
Male, age 80, right hemisphere
484.4
2092
Male, age 76, both hemispheres
394.4
2457
Female, age 91, both hemispheres
228.0
2559
Male, age 74, both hemispheres
179.4
Reticular pontine nucleus, oral nTPM: 310.4
2361
Male, age 74, both hemispheres
426.4
2012
Female, age 85, both hemispheres
401.6
1939
Male, age 80, both hemispheres
257.2
2167
Male, age 76, both hemispheres
248.7
2366
Female, age 91, both hemispheres
218.1
Reticulotegmental nucleus nTPM: 307.5
2325
Male, age 76, both hemispheres
399.1
2452
Male, age 74, both hemispheres
296.5
2333
Male, age 80, both hemispheres
287.2
2322
Female, age 91, both hemispheres
247.1
Spinal trigeminal nucleus, oral nTPM: 358.7
2737
Female, age 85, both hemispheres
409.9
2164
Male, age 80, both hemispheres
394.8
1978
Male, age 76, both hemispheres
271.5
Subcoeruleus area nTPM: 305.1
2323
Female, age 91, left hemisphere
396.7
2089
Male, age 76, left hemisphere
389.0
1958
Male, age 80, both hemispheres
347.7
2451
Male, age 74, both hemispheres
211.2
2369
Female, age 85, left hemisphere
181.1
Superior olive nTPM: 382.3
1875
Female, age 85, both hemispheres
497.2
2364
Male, age 74, right hemisphere
385.4
2020
Male, age 76, both hemispheres
362.4
2329
Male, age 80, right hemisphere
353.6
2561
Female, age 91, both hemispheres
312.7
Ventral periolivary nuclei nTPM: 433.2
2130
Female, age 85, both hemispheres
584.7
2165
Male, age 80, both hemispheres
499.5
2794
Female, age 91, left hemisphere
352.9
2023
Male, age 76, both hemispheres
295.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 340.9
2449
Male, age 74, both hemispheres
567.4
1959
Male, age 76, both hemispheres
387.0
2840
Female, age 85, both hemispheres
369.3
2161
Male, age 80, both hemispheres
318.1
2359
Male, age 61, both hemispheres
235.3
2456
Female, age 91, both hemispheres
168.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
737.9
Pig sample
Sample description
nTPM
Pons nTPM: 737.9
Samples: 4
Max nTPM: 1086.0
Min nTPM: 482.6
Sample A
Female
1086.0
Sample B
Female
482.6
Sample C
Male
586.4
Sample D
Male
796.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.