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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DIDO1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
47.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
46.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
29.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
29.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
28.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
28.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
27.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
26.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
25.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
25.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
25.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
25.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
24.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
24.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
24.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
24.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
23.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
23.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
22.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
22.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
22.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
21.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
21.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
21.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
21.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
21.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
21.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
20.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
20.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
20.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
19.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
19.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
19.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
19.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
19.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
19.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
18.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
18.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
18.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
18.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
18.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
18.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
18.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
18.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
17.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
17.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
17.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
17.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
17.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
17.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
17.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
17.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
16.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
16.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
16.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
16.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
16.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
16.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
16.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
16.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
16.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
16.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
15.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
15.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
15.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
15.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
15.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
15.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
15.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
15.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
14.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
14.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
14.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
14.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
14.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
14.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
14.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
14.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
14.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
14.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
14.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
14.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
14.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
14.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
14.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
14.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
14.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
14.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
14.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
14.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
14.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
13.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
13.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
13.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
13.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
13.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
13.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
13.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
13.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
13.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
13.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
13.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
13.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
12.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
12.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
12.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
12.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
12.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
12.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
12.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
12.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
12.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
12.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
12.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
12.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
12.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
12.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
12.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
12.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
12.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
12.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
12.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
11.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
11.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
11.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
11.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
11.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
11.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
11.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
11.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
11.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
11.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
11.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
11.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
11.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
11.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
11.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
11.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
11.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
10.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
10.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
10.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
10.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
10.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
10.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
10.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
10.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
10.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
10.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
10.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
10.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
10.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
10.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
10.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
10.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
10.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
10.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
10.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
10.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
10.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
10.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
10.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
10.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
10.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
10.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
10.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
10.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
9.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
9.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
9.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
9.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
9.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
9.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
9.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
9.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
9.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
9.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
9.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
9.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
9.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
9.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
9.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
9.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
9.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
9.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
9.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
9.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
9.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
8.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
8.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
8.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
8.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
8.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
8.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
8.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
8.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
8.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
8.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
8.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
8.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
8.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
8.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
8.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
8.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
8.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
8.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
8.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
8.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
7.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
7.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
7.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
7.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
7.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
7.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
7.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
7.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
7.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
7.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
7.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
7.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
7.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
7.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
7.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
7.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
7.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
7.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
7.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
7.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
7.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
7.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
6.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
6.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
6.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
6.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
6.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
6.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
6.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
6.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
6.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
6.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
6.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
6.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
6.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
6.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
6.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
6.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
6.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
6.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
6.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
5.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
5.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
5.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
5.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
5.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
5.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
5.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
5.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
5.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
5.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
5.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
5.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
5.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
5.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
5.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
5.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
4.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
4.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
4.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
4.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
4.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
4.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
4.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
4.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
4.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
4.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
4.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
3.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
3.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
3.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
3.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
3.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
3.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
3.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
3.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
3.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
2.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DIDO1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.5
Number of samples
231
Samples
Sample
Description
TPM
DO45127
0 years, male, NA, stage:3, dead, 420 days
49.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
42.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
38.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
36.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
34.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
31.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
27.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
25.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
24.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
23.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
23.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
22.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
22.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
21.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
20.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
20.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
20.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
20.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
19.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
19.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
19.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
19.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
18.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
18.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
18.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
18.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
18.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
18.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
18.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
17.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
17.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
16.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
16.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
16.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
16.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
16.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
16.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
16.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
16.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
16.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
16.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
16.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
16.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
15.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
15.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
15.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
15.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
15.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
15.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
15.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
15.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
14.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
14.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
14.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
14.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
14.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
14.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
14.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
14.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
14.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
14.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
14.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
14.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
13.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
13.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
13.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
13.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
13.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
13.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
13.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
13.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
13.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
13.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
13.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
13.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
12.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
12.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
12.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
12.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
12.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
12.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
12.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
12.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
11.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
11.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
11.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
11.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
11.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
11.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
11.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
11.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
11.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
11.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
11.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
11.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
11.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
11.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
11.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
11.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
10.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
10.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
10.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
10.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
10.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
10.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
10.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
10.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
10.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
10.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
10.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
10.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
10.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
10.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
10.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
10.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
10.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
10.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
10.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
10.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
10.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
9.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
9.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
9.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
9.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
9.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
9.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
9.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
9.2
DO45111
0 years, male, NA, stage:2, alive, 1590 days
9.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
9.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
9.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
9.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
9.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
9.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
9.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
9.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
8.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
8.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
8.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
8.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
8.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
8.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
8.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
8.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
8.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
8.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
8.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
8.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
8.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
8.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
8.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
8.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
8.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
7.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
7.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
7.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
7.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
7.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
7.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
7.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
7.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
7.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
7.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
7.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
7.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
7.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
7.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
7.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
7.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
7.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
7.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
7.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
7.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
7.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
7.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
7.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
7.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
7.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
7.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
7.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
7.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
7.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
7.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
6.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
6.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
6.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
6.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
6.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
6.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
6.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
6.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
6.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
5.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
5.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
5.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
5.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
5.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
5.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
5.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
5.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
5.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
5.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
4.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
4.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
4.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
4.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
4.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
4.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
4.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
4.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
4.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
4.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
3.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
2.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
2.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
2.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
2.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
2.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
2.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
497
Tumor
1.1
131
Tumor
1.1
411
Tumor
1.0
313
Tumor
0.9
743
Tumor
0.9
545
Tumor
0.9
977
Tumor
0.9
967
Tumor
0.9
1021
Tumor
0.8
385
Tumor
0.8
777
Tumor
0.8
431
Tumor
0.8
813
Tumor
0.8
951
Tumor
0.7
975
Tumor
0.7
523
Tumor
0.7
1013
Tumor
0.7
1031
Tumor
0.7
877
Tumor
0.7
695
Tumor
0.7
665
Tumor
0.7
881
Tumor
0.7
211
Tumor
0.7
863
Tumor
0.6
814
Normal
0.6
357
Tumor
0.6
297
Tumor
0.6
963
Tumor
0.6
965
Tumor
0.6
817
Tumor
0.6
277
Tumor
0.5
161
Tumor
0.5
383
Tumor
0.5
953
Tumor
0.5
535
Tumor
0.5
957
Tumor
0.5
943
Tumor
0.5
351
Tumor
0.5
447
Tumor
0.5
355
Tumor
0.5
921
Tumor
0.5
553
Tumor
0.5
647
Tumor
0.4
663
Tumor
0.4
883
Tumor
0.4
271
Tumor
0.4
461
Tumor
0.4
517
Tumor
0.4
867
Tumor
0.4
865
Tumor
0.4
331
Tumor
0.4
785
Tumor
0.4
473
Tumor
0.4
443
Tumor
0.4
527
Tumor
0.4
661
Tumor
0.4
557
Tumor
0.3
727
Tumor
0.3
857
Tumor
0.3
487
Tumor
0.3
445
Tumor
0.3
641
Tumor
0.3
285
Tumor
0.3
715
Tumor
0.3
685
Tumor
0.3
217
Tumor
0.3
467
Tumor
0.3
375
Tumor
0.3
471
Tumor
0.3
635
Tumor
0.3
413
Tumor
0.3
823
Tumor
0.3
851
Tumor
0.3
341
Tumor
0.3
343
Tumor
0.3
483
Tumor
0.3
425
Tumor
0.3
911
Tumor
0.3
724
Normal
0.3
221
Tumor
0.3
127
Tumor
0.2
873
Tumor
0.2
537
Tumor
0.2
1027
Tumor
0.2
435
Tumor
0.2
455
Tumor
0.2
423
Tumor
0.2
227
Tumor
0.2
1015
Tumor
0.2
913
Tumor
0.2
112
Tumor
0.2
171
Tumor
0.2
283
Tumor
0.2
721
Tumor
0.2
923
Tumor
0.2
515
Tumor
0.2
213
Tumor
0.2
1041
Tumor
0.2
737
Tumor
0.2
123
Tumor
0.2
147
Tumor
0.2
185
Tumor
0.2
465
Tumor
0.2
135
Tumor
0.2
141
Tumor
0.1
741
Tumor
0.1
231
Tumor
0.1
567
Tumor
0.1
463
Tumor
0.1
1045
Tumor
0.1
433
Tumor
0.1
1025
Tumor
0.1
815
Tumor
0.1
493
Tumor
0.1
671
Tumor
0.1
563
Tumor
0.1
571
Tumor
0.1
415
Tumor
0.1
427
Tumor
0.1
1043
Tumor
0.1
713
Tumor
0.1
191
Tumor
0.1
477
Tumor
0.1
125
Tumor
0.1
491
Tumor
0.1
937
Tumor
0.1
187
Tumor
0.1
498
Normal
0.1
367
Tumor
0.1
697
Tumor
0.1
524
Normal
0.1
481
Tumor
0.1
861
Tumor
0.0
261
Tumor
0.0
573
Tumor
0.0
983
Tumor
0.0
361
Tumor
0.0
955
Tumor
0.0
981
Tumor
0.0
478
Normal
0.0
915
Tumor
0.0
257
Tumor
0.0
484
Normal
0.0
393
Tumor
0.0
533
Tumor
0.0
267
Tumor
0.0
984
Normal
0.0
268
Normal
0.0
525
Tumor
0.0
384
Normal
0.0
554
Normal
0.0
365
Tumor
0.0
884
Normal
0.0
311
Tumor
0.0
536
Normal
0.0
513
Tumor
0.0
145
Tumor
0.0
1046
Normal
0.0
534
Normal
0.0
917
Tumor
0.0
954
Normal
0.0
492
Normal
0.0
858
Normal
0.0
878
Normal
-0.1
1014
Normal
-0.1
137
Tumor
-0.1
472
Normal
-0.1
615
Tumor
-0.1
456
Normal
-0.1
912
Normal
-0.1
698
Normal
-0.1
882
Normal
-0.1
716
Normal
-0.1
964
Normal
-0.1
482
Normal
-0.1
616
Normal
-0.1
444
Normal
-0.1
538
Normal
-0.1
232
Normal
-0.1
824
Normal
-0.1
966
Normal
-0.1
778
Normal
-0.1
516
Normal
-0.1
518
Normal
-0.1
968
Normal
-0.1
488
Normal
-0.1
474
Normal
-0.1
1042
Normal
-0.1
852
Normal
-0.1
818
Normal
-0.1
696
Normal
-0.1
421
Tumor
-0.1
387
Tumor
-0.1
672
Normal
-0.1
628
Normal
-0.1
412
Normal
-0.1
368
Normal
-0.1
391
Tumor
-0.1
224
Normal
-0.1
744
Normal
-0.1
1032
Normal
-0.1
714
Normal
-0.1
448
Normal
-0.1
958
Normal
-0.1
192
Normal
-0.1
944
Normal
-0.1
686
Normal
-0.1
546
Normal
-0.1
514
Normal
-0.1
1016
Normal
-0.1
284
Normal
-0.2
258
Normal
-0.2
451
Tumor
-0.2
866
Normal
-0.2
494
Normal
-0.2
528
Normal
-0.2
786
Normal
-0.2
618
Normal
-0.2
978
Normal
-0.2
1022
Normal
-0.2
666
Normal
-0.2
362
Normal
-0.2
1028
Normal
-0.2
756
Normal
-0.2
376
Normal
-0.2
286
Normal
-0.2
526
Normal
-0.2
627
Tumor
-0.2
395
Tumor
-0.2
364
Normal
-0.2
636
Normal
-0.2
148
Normal
-0.2
642
Normal
-0.2
298
Normal
-0.2
1026
Normal
-0.2
662
Normal
-0.2
188
Normal
-0.2
396
Normal
-0.2
1044
Normal
-0.2
462
Normal
-0.2
366
Normal
-0.2
746
Normal
-0.2
864
Normal
-0.2
976
Normal
-0.2
914
Normal
-0.2
982
Normal
-0.2
172
Normal
-0.2
223
Tumor
-0.2
874
Normal
-0.2
464
Normal
-0.2
146
Normal
-0.2
272
Normal
-0.2
312
Normal
-0.2
124
Normal
-0.2
868
Normal
-0.2
952
Normal
-0.2
363
Tumor
-0.2
574
Normal
-0.2
862
Normal
-0.2
386
Normal
-0.2
212
Normal
-0.2
664
Normal
-0.2
352
Normal
-0.2
434
Normal
-0.2
938
Normal
-0.2
195
Tumor
-0.2
142
Normal
-0.2
426
Normal
-0.2
228
Normal
-0.2
922
Normal
-0.2
353
Tumor
-0.2
926
Normal
-0.2
392
Normal
-0.2
924
Normal
-0.2
468
Normal
-0.2
416
Normal
-0.2
816
Normal
-0.2
332
Normal
-0.2
466
Normal
-0.2
755
Tumor
-0.2
126
Normal
-0.3
648
Normal
-0.3
162
Normal
-0.3
342
Normal
-0.3
422
Normal
-0.3
128
Normal
-0.3
436
Normal
-0.3
328
Normal
-0.3
262
Normal
-0.3
186
Normal
-0.3
728
Normal
-0.3
327
Tumor
-0.3
113
Tumor
-0.3
738
Normal
-0.3
916
Normal
-0.3
354
Normal
-0.3
925
Tumor
-0.3
114
Normal
-0.3
742
Normal
-0.3
918
Normal
-0.3
956
Normal
-0.3
388
Normal
-0.3
394
Normal
-0.3
722
Normal
-0.3
572
Normal
-0.3
745
Tumor
-0.3
558
Normal
-0.3
723
Tumor
-0.3
138
Normal
-0.3
111
Normal
-0.3
564
Normal
-0.3
452
Normal
-0.3
344
Normal
-0.3
218
Normal
-0.3
278
Normal
-0.3
132
Normal
-0.3
356
Normal
-0.3
424
Normal
-0.3
428
Normal
-0.3
214
Normal
-0.3
568
Normal
-0.3
414
Normal
-0.3
314
Normal
-0.4
358
Normal
-0.4
136
Normal
-0.4
196
Normal
-0.4
222
Normal
-0.4
617
Tumor
-0.4
446
Normal
-0.4
432
Normal
-0.4
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.