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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DNAJC5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
70.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
62.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
60.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
56.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
49.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
49.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
44.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
43.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
43.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
40.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
39.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
38.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
38.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
36.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
35.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
35.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
35.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
33.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
31.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
31.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
29.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
29.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
28.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
28.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
27.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
26.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
25.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
25.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
25.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
24.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
23.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
23.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
22.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
22.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
21.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
21.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
21.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
20.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
19.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
19.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
19.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
19.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
19.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
19.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
18.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
16.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
16.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
15.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
13.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
13.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
13.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
12.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
12.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
11.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
11.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
9.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DNAJC5 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
31.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
26.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
25.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
25.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
24.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
23.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
22.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
22.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
21.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
20.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
20.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
20.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
20.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
19.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
19.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
19.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
19.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
19.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
19.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
18.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
18.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
18.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
18.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
18.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
18.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
18.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
17.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
17.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
17.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
17.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
17.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
17.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
17.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
17.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
16.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
16.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
16.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
16.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
16.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
16.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
16.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
16.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
16.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
16.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
16.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
16.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
16.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
16.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
16.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
16.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
15.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
15.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
15.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
15.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
15.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
15.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
15.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
15.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
15.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
15.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
15.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
15.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
15.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
15.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
15.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
15.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
15.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
15.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
15.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
15.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
15.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
15.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
15.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
15.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
15.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
15.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
15.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
14.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
14.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
14.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
14.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
14.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
14.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
14.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
14.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
14.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
14.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
14.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
14.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
14.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
14.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
14.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
14.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
14.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
14.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
14.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
14.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
14.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
14.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
14.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
14.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
14.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
14.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
14.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
13.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
13.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
13.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
13.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
13.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
13.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
13.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
13.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
13.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
13.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
13.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
13.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
13.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
13.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
13.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
13.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
13.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
13.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
13.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
13.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
13.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
13.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
13.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
13.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
13.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
13.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
13.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
13.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
13.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
13.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
12.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
12.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
12.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
12.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
12.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
12.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
12.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
12.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
12.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
12.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
12.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
12.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
12.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
12.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
12.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
12.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
12.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
12.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
12.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
12.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
12.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
12.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
12.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
12.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
12.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
12.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
12.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
12.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
12.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
12.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
12.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
12.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
12.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
12.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
12.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
12.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
11.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
11.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
11.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
11.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
11.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
11.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
11.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
11.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
11.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
11.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
11.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
11.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
11.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
11.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
11.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
11.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
11.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
11.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
11.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
11.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
11.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
11.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
11.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
11.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
11.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
11.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
11.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
11.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
11.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
11.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
11.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
11.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
11.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
11.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
11.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
11.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
10.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
10.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
10.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
10.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
10.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
10.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
10.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
10.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
10.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
10.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
10.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
10.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
10.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
10.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
10.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
10.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
10.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
10.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
10.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
10.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
10.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
10.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
10.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
10.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
10.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
10.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
10.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
10.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
10.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
10.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
10.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
10.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
10.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
9.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
9.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
9.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
9.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
9.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
9.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
9.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
9.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
9.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
9.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
9.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
9.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
9.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
9.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
9.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
9.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
9.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
9.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
9.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
9.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
9.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
9.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
9.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
9.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
9.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
9.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
9.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
9.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
9.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
9.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
9.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
8.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
8.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
8.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
8.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
8.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
8.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
8.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
8.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
8.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
8.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
8.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
8.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
8.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
8.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
8.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
8.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
8.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
8.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
8.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
8.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
8.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
8.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
8.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
8.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
7.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
7.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
7.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
7.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
7.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
7.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
7.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
7.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
7.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
7.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
7.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
7.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
7.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
7.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
7.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
7.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
7.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
7.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
7.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
7.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
7.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
6.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
6.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
6.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
6.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
6.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
6.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
6.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
6.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
6.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
6.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
6.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
6.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
6.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
6.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
5.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
5.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
5.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
5.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
5.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
5.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
5.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
5.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
5.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
5.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
5.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
5.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
5.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
4.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
4.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
4.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
4.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
4.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
4.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
4.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
4.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
3.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
3.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
3.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
3.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
3.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DNAJC5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
27.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
25.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
25.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
24.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
23.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
23.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
23.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
23.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
21.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
21.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
21.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
21.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
21.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
21.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
20.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
20.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
20.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
20.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
19.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
19.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
19.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
19.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
18.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
18.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
18.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
18.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
18.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
18.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
17.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
17.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
17.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
17.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
17.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
17.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
16.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
16.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
16.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
16.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
16.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
15.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
14.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
14.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
13.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
13.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
13.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
13.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
13.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
13.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
13.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
13.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
12.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
12.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
12.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
12.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
12.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
11.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
11.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
11.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
11.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
11.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
10.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
10.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
10.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
10.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
10.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
10.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
10.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
10.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
9.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
9.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
9.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
9.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
9.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
8.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
8.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
8.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
7.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
7.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
7.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
7.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
7.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
6.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
5.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DNAJC5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
72.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
57.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
56.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
52.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
50.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
49.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
49.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
48.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
46.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
46.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
46.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
43.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
41.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
41.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
41.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
41.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
40.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
40.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
39.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
38.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
37.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
36.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
35.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
35.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
35.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
34.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
34.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
33.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
33.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
32.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
32.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
31.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
31.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
31.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
30.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
29.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
29.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
29.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
28.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
27.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
27.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
27.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
26.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
26.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
26.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
26.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
26.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
26.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
26.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
26.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
25.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
25.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
25.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
25.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
25.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
25.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
24.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
24.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
24.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
24.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
24.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
24.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
23.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
23.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
23.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
23.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
23.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
23.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
23.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
23.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
23.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
22.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
22.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
22.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
22.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
22.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
22.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
22.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
21.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
21.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
21.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
21.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
21.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
21.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
21.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
20.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
20.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
20.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
20.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
20.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
20.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
20.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
20.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
20.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
19.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
19.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
19.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
19.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
19.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
19.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
19.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
18.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
18.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
18.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
18.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
18.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
18.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
18.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
18.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
18.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
18.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
17.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
17.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
17.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
17.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
17.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
17.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
17.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
16.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
16.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
16.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
16.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
16.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
16.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
16.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
16.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
16.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
16.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
16.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
16.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
16.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
16.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
15.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
15.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
15.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
15.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
15.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
15.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
15.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
15.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
15.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
15.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
14.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
14.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
14.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
14.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
14.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
14.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
14.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
13.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
13.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
13.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
13.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
13.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
12.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
12.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
12.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
12.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
12.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
12.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
12.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
12.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
12.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
12.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
12.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
11.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
11.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
11.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
11.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
11.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
11.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
10.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
10.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
10.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
10.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
10.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
10.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
10.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
10.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
10.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
10.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
9.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
9.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
9.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
9.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
9.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
9.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
9.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
9.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
9.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
8.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
8.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
8.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
8.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
8.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
7.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
7.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
7.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
7.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
6.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
5.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
5.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
4.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
4.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
2.0
CPT0078660003
Tumor
1.8
CPT0086950003
Tumor
1.5
CPT0025050003
Tumor
1.1
CPT0086030003
Tumor
1.1
CPT0015810003
Tumor
1.0
CPT0076330003
Tumor
0.9
CPT0063630003
Tumor
0.9
CPT0088550004
Tumor
0.9
CPT0023350003
Tumor
0.9
CPT0086360003
Tumor
0.8
CPT0081880003
Tumor
0.8
CPT0001180009
Tumor
0.7
CPT0015730003
Tumor
0.6
CPT0002350011
Tumor
0.6
CPT0092290003
Tumor
0.6
CPT0065750003
Tumor
0.6
CPT0092730003
Tumor
0.6
CPT0026420001
Normal
0.6
CPT0079410003
Tumor
0.6
CPT0075130003
Tumor
0.6
CPT0088690003
Tumor
0.6
CPT0007320003
Tumor
0.5
CPT0088970003
Tumor
0.5
CPT0078510003
Tumor
0.4
CPT0087050003
Normal
0.4
CPT0087040003
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0019130003
Tumor
0.4
CPT0065690003
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0079430001
Normal
0.4
CPT0064370003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0092740003
Normal
0.3
CPT0001190001
Normal
0.3
CPT0023360001
Normal
0.3
CPT0000640003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0076350001
Normal
0.3
CPT0006730001
Normal
0.3
CPT0001340003
Tumor
0.3
CPT0086890003
Normal
0.2
CPT0092790003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0025880003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0007470001
Normal
0.1
CPT0011410003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0001350001
Normal
0.1
CPT0025290003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0075720003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0078840001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0071150004
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0025110003
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0012280003
Tumor
-0.2
CPT0000790001
Normal
-0.2
CPT0007860003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0023690003
Tumor
-0.2
CPT0020130001
Normal
-0.2
CPT0077500001
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0014450004
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0066520001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0078930003
Tumor
-0.3
CPT0000660001
Normal
-0.3
CPT0006440003
Tumor
-0.3
CPT0077140001
Normal
-0.3
CPT0088570001
Normal
-0.4
CPT0025350003
Tumor
-0.4
CPT0088920001
Normal
-0.4
CPT0085670003
Tumor
-0.4
CPT0088760003
Tumor
-0.4
CPT0065450001
Normal
-0.4
CPT0026410003
Tumor
-0.4
CPT0081620001
Normal
-0.4
CPT0025580004
Tumor
-0.4
CPT0014130001
Normal
-0.4
CPT0079000001
Normal
-0.4
CPT0010160003
Tumor
-0.4
CPT0088780001
Normal
-0.4
CPT0000890001
Normal
-0.5
CPT0078940001
Normal
-0.5
CPT0078990003
Tumor
-0.5
CPT0077490003
Tumor
-0.5
CPT0065820001
Normal
-0.5
CPT0086370003
Normal
-0.5
CPT0010120001
Normal
-0.5
CPT0001260009
Tumor
-0.5
CPT0064400001
Normal
-0.5
CPT0065810003
Tumor
-0.5
CPT0014350001
Normal
-0.6
CPT0012550003
Tumor
-0.6
CPT0017850003
Tumor
-0.6
CPT0014370004
Tumor
-0.7
CPT0079270003
Tumor
-0.7
CPT0066430001
Normal
-0.7
CPT0079230003
Tumor
-0.7
CPT0069160003
Tumor
-0.7
CPT0012180003
Tumor
-0.8
CPT0000780007
Tumor
-0.8
CPT0010170001
Normal
-0.8
CPT0012370003
Tumor
-0.9
CPT0078670001
Normal
-0.9
CPT0078530001
Normal
-0.9
CPT0012290003
Normal
-0.9
CPT0013790003
Normal
-1.0
CPT0069010001
Normal
-1.0
CPT0021240003
Tumor
-1.0
CPT0024670003
Tumor
-1.0
CPT0001510001
Normal
-1.1
CPT0025610001
Normal
-1.2
CPT0012090003
Normal
-1.3
CPT0011240003
Tumor
-1.3
CPT0009020003
Normal
-1.3
CPT0024680001
Normal
-1.4
CPT0012770003
Normal
-1.4
CPT0012570003
Normal
-1.4
CPT0069190001
Normal
-1.5
CPT0069000003
Tumor
-1.5
CPT0012640003
Normal
-1.5
CPT0012670003
Tumor
-1.5
CPT0017450001
Normal
-1.5
CPT0009000003
Tumor
-1.6
CPT0012080003
Tumor
-1.6
CPT0017410003
Tumor
-1.7
CPT0009060003
Tumor
-1.7
CPT0082010001
Normal
-1.8
CPT0012900004
Tumor
-1.9
CPT0012920003
Normal
-1.9
CPT0018250001
Normal
-2.0
CPT0009080003
Normal
-2.0
CPT0081990003
Tumor
-2.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
