Expression of PCNX1 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

PCNX1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 5.03

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

3.8

Number of samples

362

Samples

Sample	Description	TPM
TCGA-CC-5263-01A	0 years, male, asian, stage:Stage IIIA, dead, 129 days	17.8
TCGA-CC-5260-01A	0 years, female, asian, stage:Stage IIIC, dead, 87 days	14.5
TCGA-DD-AACO-01A	0 years, male, asian, stage:Stage I, alive, 1876 days	13.3
TCGA-BC-A8YO-01A	0 years, female, white, stage:Stage IIIC, alive, 562 days	12.6
TCGA-DD-A4NA-01A	0 years, female, white, stage:Stage IIIC, alive, 1008 days	12.5
TCGA-DD-A114-01A	0 years, male, black or african american, stage:Stage II, dead, 1149 days	11.9
TCGA-DD-A1EH-01A	0 years, male, white, stage:Stage III, alive, 1495 days	10.3
TCGA-DD-A73E-01A	0 years, male, white, stage:Stage I, alive, 44 days	10.1
TCGA-ED-A5KG-01A	0 years, female, asian, stage:Stage II, alive, 854 days	10.1
TCGA-DD-A1EA-01A	0 years, male, asian, stage:Stage II, alive, 2415 days	10.1
TCGA-DD-A73C-01A	0 years, female, white, stage:Stage IIIA, alive, 701 days	9.8
TCGA-ZP-A9D2-01A	0 years, male, white, stage:'--, dead, 765 days	9.6
TCGA-BC-A10W-01A	0 years, male, asian, stage:'--, dead, 91 days	9.4
TCGA-DD-AADY-01A	0 years, female, asian, stage:Stage I, alive, 555 days	9.1
TCGA-DD-A1EE-01A	0 years, male, white, stage:Stage IIIA, dead, 349 days	8.6
TCGA-DD-A4ND-01A	0 years, female, white, stage:Stage I, alive, 2746 days	8.1
TCGA-ZP-A9D0-01A	0 years, female, black or african american, stage:'--, alive, 1091 days	7.9
TCGA-CC-5264-01A	0 years, male, asian, stage:Stage IIIA, dead, 102 days	7.7
TCGA-UB-A7MB-01A	0 years, male, white, stage:Stage II, alive, 601 days	7.6
TCGA-CC-A7IJ-01A	0 years, male, asian, stage:Stage II, alive, 382 days	7.6
TCGA-ED-A66Y-01A	0 years, female, asian, stage:Stage IIIA, dead, 296 days	7.5
TCGA-CC-A7IK-01A	0 years, male, asian, stage:Stage IIIA, dead, 262 days	7.4
TCGA-ED-A7PY-01A	0 years, female, asian, stage:Stage II, alive, 390 days	7.4
TCGA-DD-A1EB-01A	0 years, female, stage:Stage I, alive, 2017 days	7.4
TCGA-KR-A7K2-01A	0 years, male, white, stage:Stage I, alive, 829 days	7.4
TCGA-DD-AAD1-01A	0 years, female, asian, stage:Stage I, alive, 564 days	7.3
TCGA-QA-A7B7-01A	0 years, male, black or african american, stage:Stage II, alive, 94 days	7.3
TCGA-UB-A7MA-01A	0 years, female, white, stage:Stage II, alive, 848 days	7.0
TCGA-FV-A23B-01A	0 years, female, white, stage:Stage II, dead, 1852 days	7.0
TCGA-DD-AADW-01A	0 years, male, asian, stage:Stage I, alive, 587 days	7.0
TCGA-GJ-A9DB-01A	0 years, male, white, stage:Stage I, dead, 67 days	7.0
TCGA-DD-A4NE-01A	0 years, female, white, stage:Stage IIIA, dead, 660 days	6.8
TCGA-FV-A3R2-01A	0 years, male, white, stage:Stage I, dead, 194 days	6.8
TCGA-DD-A4NS-01A	0 years, female, white, stage:Stage I, dead, 2456 days	6.7
TCGA-DD-A4NF-01A	0 years, male, white, stage:Stage I, alive, 942 days	6.7
TCGA-DD-A1EF-01A	0 years, female, white, stage:Stage I, dead, 394 days	6.7
TCGA-DD-A1EC-01A	0 years, female, white, stage:Stage I, alive, 602 days	6.6
TCGA-ZP-A9D1-01A	0 years, female, white, stage:'--, alive, 21 days	6.6
TCGA-CC-5261-01A	0 years, male, asian, stage:Stage II, dead, 97 days	6.6
TCGA-WX-AA44-01A	0 years, female, white, stage:Stage I, alive, 615 days	6.5
TCGA-XR-A8TG-01A	0 years, male, white, stage:Stage I, alive, 898 days	6.4
TCGA-2Y-A9GZ-01A	0 years, female, white, stage:Stage II, dead, 848 days	6.4
TCGA-ZP-A9CV-01A	0 years, male, white, stage:'--, dead, 1088 days	6.4
TCGA-DD-AAEK-01A	0 years, male, asian, stage:Stage II, alive, 1067 days	6.3
TCGA-2Y-A9GS-01A	0 years, male, white, stage:'--, dead, 724 days	6.3
TCGA-CC-A123-01A	0 years, female, asian, stage:Stage IIIA, alive, 219 days	6.3
TCGA-FV-A3R3-01A	0 years, female, white, stage:Stage I, dead, 366 days	6.3
TCGA-2Y-A9GU-01A	0 years, female, white, stage:Stage I, alive, 1939 days	6.2
TCGA-DD-A4NV-01A	0 years, male, white, stage:Stage IIIA, alive, 2398 days	6.1
TCGA-DD-A118-01A	0 years, female, white, stage:Stage II, alive, 3437 days	6.0
TCGA-DD-A113-01A	0 years, female, white, stage:Stage II, alive, 2425 days	5.9
TCGA-BC-A10Q-01A	0 years, female, white, stage:'--, dead, 1135 days	5.9
TCGA-DD-AADP-01A	0 years, male, asian, stage:Stage I, alive, 458 days	5.9
TCGA-G3-A7M9-01A	0 years, male, white, stage:Stage IIIB, dead, 56 days	5.8
TCGA-DD-A4NH-01A	0 years, female, white, stage:Stage IIIB, alive, 917 days	5.7
TCGA-CC-A5UD-01A	0 years, male, asian, stage:Stage IIIA, dead, 304 days	5.7
TCGA-UB-AA0U-01A	0 years, male, white, stage:Stage II, alive, 327 days	5.6
TCGA-DD-AACI-01A	0 years, male, asian, stage:Stage II, alive, 1618 days	5.6
TCGA-ES-A2HS-01A	0 years, male, white, stage:Stage I, dead, 688 days	5.5
TCGA-BC-A10Y-01A	0 years, male, white, stage:'--, dead, 711 days	5.5
TCGA-G3-A7M6-01A	0 years, female, white, stage:Stage I, alive, 632 days	5.4
TCGA-DD-A4NJ-01A	0 years, female, white, stage:Stage II, alive, 928 days	5.4
TCGA-G3-A6UC-01A	0 years, male, white, stage:Stage IIIB, alive, 671 days	5.4
TCGA-FV-A3I1-01A	0 years, female, white, stage:Stage II, dead, 247 days	5.4
TCGA-4R-AA8I-01A	0 years, male, white, stage:Stage II, dead, 262 days	5.3
TCGA-MR-A520-01A	0 years, male, white, stage:Stage I, alive, 229 days	5.3
TCGA-G3-A25U-01A	0 years, female, asian, stage:Stage I, alive, 1636 days	5.3
TCGA-DD-AADA-01A	0 years, female, asian, stage:Stage I, alive, 1233 days	5.3
TCGA-BC-A112-01A	0 years, male, white, stage:'--, dead, 153 days	5.3
TCGA-2Y-A9HA-01A	0 years, male, white, stage:Stage II, dead, 36 days	5.2
TCGA-XR-A8TE-01A	0 years, male, white, stage:Stage IIIA, alive, 925 days	5.2
TCGA-UB-A7ME-01A	0 years, male, asian, stage:Stage I, alive, 486 days	5.2
TCGA-GJ-A6C0-01A	0 years, female, white, stage:Stage II, dead, 31 days	5.2
TCGA-DD-AADV-01A	0 years, male, asian, stage:Stage I, alive, 574 days	5.2
TCGA-EP-A26S-01A	0 years, male, white, stage:Stage I, alive, 608 days	5.2
TCGA-DD-A11B-01A	0 years, male, white, stage:Stage I, dead, 14 days	5.2
TCGA-2Y-A9GX-01A	0 years, male, white, stage:Stage I, alive, 2442 days	5.2
TCGA-GJ-A3OU-01A	0 years, male, white, stage:Stage I, alive, 879 days	5.2
TCGA-DD-A73B-01A	0 years, female, white, stage:Stage I, dead, 283 days	5.2
TCGA-CC-A3M9-01A	0 years, male, asian, stage:Stage IIIA, dead, 300 days	5.1
TCGA-DD-AACV-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	5.1
TCGA-G3-A25Y-01A	0 years, female, asian, stage:Stage I, dead, 452 days	5.0
TCGA-ED-A82E-01A	0 years, female, asian, stage:Stage IIIA, alive, 408 days	5.0
TCGA-ZS-A9CF-01A	0 years, male, white, stage:Stage II, alive, 2412 days	5.0
TCGA-ED-A4XI-01A	0 years, male, asian, stage:Stage II, alive, 819 days	5.0
TCGA-CC-5258-01A	0 years, male, asian, stage:Stage II, dead, 129 days	5.0
TCGA-BC-A3KG-01A	0 years, female, white, stage:Stage II, alive, 680 days	4.9
TCGA-DD-AAW1-01A	0 years, male, asian, stage:Stage IIIA, alive, 1989 days	4.9
TCGA-DD-AACB-01A	0 years, female, asian, stage:Stage I, alive, 2324 days	4.9
TCGA-ZP-A9D4-01A	0 years, female, white, stage:'--, alive, 395 days	4.8
TCGA-DD-A39W-01A	0 years, female, white, stage:Stage III, dead, 827 days	4.8
TCGA-2Y-A9H3-01A	0 years, male, white, stage:Stage II, alive, 1516 days	4.8
TCGA-DD-AAD3-01A	0 years, male, asian, stage:Stage I, alive, 1295 days	4.8
TCGA-DD-A4NP-01A	0 years, male, white, stage:Stage I, alive, 3308 days	4.7
TCGA-2Y-A9H6-01A	0 years, female, white, stage:Stage I, alive, 357 days	4.7
TCGA-DD-AAW0-01A	0 years, male, asian, stage:Stage I, alive, 2015 days	4.7
TCGA-DD-A4NO-01A	0 years, male, white, stage:Stage I, alive, 2245 days	4.7
TCGA-K7-AAU7-01A	0 years, male, white, stage:Stage II, alive, 359 days	4.7
TCGA-DD-AAE4-01A	0 years, female, asian, stage:Stage I, alive, 608 days	4.7
TCGA-ED-A97K-01A	0 years, male, asian, stage:Stage IIIA, alive, 6 days	4.6
TCGA-DD-A3A6-01A	0 years, female, white, stage:Stage II, dead, 3258 days	4.6
TCGA-CC-A1HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 101 days	4.5
TCGA-5R-AAAM-01A	0 years, female, white, stage:Stage II, dead, 46 days	4.5
TCGA-EP-A12J-01A	0 years, male, black or african american, stage:Stage I, alive, 570 days	4.5
TCGA-DD-A1EI-01A	0 years, male, asian, stage:Stage I, alive, 183 days	4.5
TCGA-DD-AADS-01A	0 years, male, asian, stage:Stage I, alive, 474 days	4.5
TCGA-UB-AA0V-01A	0 years, female, white, stage:Stage I, alive, 314 days	4.5
TCGA-KR-A7K0-01A	0 years, male, white, stage:Stage I, dead, 65 days	4.5
TCGA-2Y-A9H5-01A	0 years, female, white, stage:Stage I, dead, 555 days	4.4
TCGA-DD-A1EJ-01A	0 years, female, white, stage:Stage IIIC, dead, 1005 days	4.4
TCGA-K7-A5RF-01A	0 years, male, white, stage:Stage I, alive, 631 days	4.4
TCGA-CC-A7IH-01A	0 years, male, asian, stage:Stage IIIA, alive, 365 days	4.4
TCGA-BC-A10T-01A	0 years, male, white, stage:'--, dead, 837 days	4.4
TCGA-DD-AAEB-01A	0 years, male, asian, stage:Stage I, alive, 478 days	4.4
TCGA-DD-A1EK-01A	0 years, female, white, stage:Stage IVB, dead, 558 days	4.4
TCGA-DD-A11D-01A	0 years, female, white, stage:Stage I, dead, 1560 days	4.4
TCGA-ED-A7PX-01A	0 years, female, asian, stage:Stage II, alive, 6 days	4.3
TCGA-DD-AAE2-01A	0 years, male, asian, stage:Stage I, alive, 638 days	4.3
TCGA-DD-AACN-01A	0 years, male, asian, stage:Stage I, alive, 1302 days	4.3
TCGA-DD-A4NK-01A	0 years, female, white, stage:Stage IIIA, dead, 1210 days	4.3
TCGA-G3-A3CK-01A	0 years, male, asian, stage:Stage I, alive, 585 days	4.3
TCGA-FV-A2QR-01A	0 years, male, white, stage:Stage I, dead, 581 days	4.3
TCGA-CC-A3MA-01A	0 years, male, asian, stage:Stage IIIA, dead, 303 days	4.2
TCGA-DD-A73G-01A	0 years, female, white, stage:Stage I, alive, 3478 days	4.2
TCGA-2Y-A9H8-01A	0 years, female, white, stage:'--, dead, 633 days	4.2
TCGA-2Y-A9GT-01A	0 years, male, white, stage:Stage I, dead, 1624 days	4.2
TCGA-DD-AAVS-01A	0 years, male, asian, stage:Stage I, alive, 1823 days	4.2
TCGA-DD-A73A-01A	0 years, male, white, stage:Stage I, alive, 728 days	4.2
TCGA-2Y-A9GV-01A	0 years, female, white, stage:Stage I, dead, 2532 days	4.1
TCGA-5R-AA1C-01A	0 years, male, white, stage:Stage II, alive, 520 days	4.1
TCGA-DD-AAVZ-01A	0 years, male, asian, stage:Stage I, alive, 1900 days	4.1
TCGA-ZP-A9CY-01A	0 years, female, white, stage:'--, alive, 782 days	4.1
TCGA-ED-A66X-01A	0 years, male, asian, stage:Stage IIIA, alive, 406 days	4.1
TCGA-DD-A115-01A	0 years, male, white, stage:Stage IIIA, dead, 2542 days	4.1
TCGA-G3-AAV4-01A	0 years, female, white, stage:Stage I, dead, 27 days	4.1
TCGA-G3-AAV6-01A	0 years, female, white, stage:Stage IIIA, dead, 65 days	4.1
TCGA-BC-A216-01A	0 years, female, white, stage:Stage IIIA, alive, 1351 days	4.1
TCGA-G3-A3CI-01A	0 years, male, white, stage:Stage I, alive, 180 days	4.1
TCGA-G3-A5SI-01A	0 years, male, asian, stage:Stage II, dead, 768 days	4.1
TCGA-G3-AAV3-01A	0 years, female, white, stage:Stage II, alive, 412 days	4.1
TCGA-BD-A2L6-01A	0 years, male, white, stage:'--, alive, 1363 days	4.1
TCGA-DD-AACL-01A	0 years, female, asian, stage:Stage I, dead, 107 days	4.0
TCGA-G3-A3CG-01A	0 years, male, white, stage:Stage I, alive, 673 days	4.0
TCGA-RC-A6M4-01A	0 years, female, white, stage:Stage IIIA, alive, 22 days	4.0
TCGA-ED-A627-01A	0 years, male, white, stage:Stage I, alive, 423 days	4.0
TCGA-XR-A8TC-01A	0 years, female, white, stage:Stage I, alive, 1339 days	4.0
TCGA-ZS-A9CG-01A	0 years, male, white, stage:Stage II, alive, 341 days	3.9
TCGA-DD-A4NB-01A	0 years, male, white, stage:Stage I, alive, 989 days	3.9
TCGA-K7-A5RG-01A	0 years, male, black or african american, stage:Stage I, alive, 519 days	3.9
TCGA-BC-A217-01A	0 years, female, white, stage:Stage II, dead, 1397 days	3.9
TCGA-DD-AACY-01A	0 years, male, asian, stage:Stage I, alive, 1450 days	3.9
TCGA-YA-A8S7-01A	0 years, male, white, stage:Stage IIIA, dead, 412 days	3.9
TCGA-DD-AACG-01A	0 years, male, asian, stage:Stage II, dead, 469 days	3.9
TCGA-HP-A5N0-01A	0 years, female, stage:'--, dead, 752 days	3.8
TCGA-UB-A7MC-01A	0 years, male, white, stage:Stage IIIA, alive, 500 days	3.8
TCGA-5C-A9VH-01A	0 years, male, white, stage:Stage I, alive, 322 days	3.8
TCGA-DD-AAD0-01A	0 years, female, asian, stage:Stage I, alive, 137 days	3.8
TCGA-ED-A8O5-01A	0 years, female, asian, stage:Stage IIIA, alive, 406 days	3.8
TCGA-CC-A8HS-01A	0 years, male, asian, stage:Stage IIIC, dead, 300 days	3.8
TCGA-ED-A8O6-01A	0 years, female, asian, stage:Stage IIIA, dead, 56 days	3.8
TCGA-DD-AACU-01A	0 years, male, asian, stage:Stage I, alive, 1567 days	3.8
TCGA-BC-A5W4-01A	0 years, male, white, stage:Stage IIIA, dead, 547 days	3.7
TCGA-DD-A4NR-01A	0 years, female, white, stage:Stage I, dead, 9 days	3.7
TCGA-2Y-A9HB-01A	0 years, male, stage:Stage I, alive, 260 days	3.7
TCGA-DD-AAW2-01A	0 years, male, asian, stage:Stage I, alive, 1855 days	3.7
TCGA-LG-A6GG-01A	0 years, female, white, stage:Stage II, alive, 387 days	3.7
TCGA-G3-A5SK-01A	0 years, male, white, stage:Stage I, alive, 744 days	3.7
TCGA-DD-A3A2-01A	0 years, female, white, stage:Stage I, dead, 2131 days	3.6
TCGA-ZP-A9CZ-01A	0 years, male, asian, stage:'--, alive, 706 days	3.6
TCGA-DD-AAVW-01A	0 years, male, asian, stage:Stage I, alive, 2317 days	3.6
TCGA-T1-A6J8-01A	0 years, male, white, stage:'--, alive, 23 days	3.6
TCGA-DD-AADB-01A	0 years, male, asian, stage:Stage I, alive, 1242 days	3.5
TCGA-DD-AACH-01A	0 years, male, asian, stage:Stage II, dead, 195 days	3.5
TCGA-BC-A10X-01A	0 years, female, white, stage:Stage IIIA, dead, 770 days	3.5
TCGA-BD-A3ER-01A	0 years, male, white, stage:Stage II, alive, 1115 days	3.5
TCGA-3K-AAZ8-01A	0 years, male, black or african american, stage:Stage IIIB, alive, 396 days	3.5
TCGA-DD-AACK-01A	0 years, male, asian, stage:Stage I, alive, 9 days	3.5
TCGA-G3-AAV7-01A	0 years, male, asian, stage:Stage II, alive, 361 days	3.5
TCGA-2Y-A9H7-01A	0 years, female, white, stage:Stage I, alive, 1168 days	3.5
TCGA-DD-AA3A-01A	0 years, female, white, stage:Stage I, dead, 410 days	3.4
TCGA-FV-A4ZQ-01A	0 years, male, white, stage:Stage I, alive, 12 days	3.4
TCGA-DD-A1ED-01A	0 years, male, white, stage:Stage I, alive, 2301 days	3.4
TCGA-DD-AADI-01A	0 years, female, asian, stage:Stage I, alive, 1085 days	3.4
TCGA-CC-A9FW-01A	0 years, male, asian, stage:Stage IIIA, alive, 248 days	3.4
TCGA-DD-A11C-01A	0 years, male, white, stage:Stage I, alive, 662 days	3.4
TCGA-DD-A3A9-01A	0 years, female, white, stage:Stage IVB, dead, 931 days	3.4
TCGA-CC-A3MB-01A	0 years, male, asian, stage:Stage IIIA, dead, 315 days	3.4
TCGA-RC-A6M5-01A	0 years, female, white, stage:Stage IVA, alive, 15 days	3.3
TCGA-5C-A9VG-01A	0 years, male, white, stage:Stage II, alive, 328 days	3.3
TCGA-DD-AADD-01A	0 years, male, asian, stage:Stage I, alive, 1231 days	3.3
TCGA-DD-AACW-01A	0 years, male, asian, stage:Stage I, alive, 1424 days	3.3
TCGA-DD-AAE1-01A	0 years, male, asian, stage:Stage I, alive, 552 days	3.3
TCGA-G3-A7M8-01A	0 years, male, asian, stage:Stage I, alive, 430 days	3.3
TCGA-DD-AADO-01A	0 years, male, asian, stage:Stage I, alive, 453 days	3.2
TCGA-5R-AA1D-01A	0 years, female, white, stage:Stage IIIA, alive, 449 days	3.2
TCGA-BC-A10S-01A	0 years, male, white, stage:'--, dead, 1423 days	3.2
TCGA-DD-AADJ-01A	0 years, female, asian, stage:Stage I, alive, 1066 days	3.2
TCGA-FV-A496-01A	0 years, female, white, stage:Stage I, alive, 10 days	3.2
TCGA-2Y-A9GW-01A	0 years, male, white, stage:Stage I, dead, 1271 days	3.2
TCGA-G3-AAV1-01A	0 years, male, asian, stage:Stage IIIC, dead, 359 days	3.2
TCGA-DD-AACQ-01A	0 years, male, asian, stage:Stage II, dead, 432 days	3.2
TCGA-DD-AAEG-01A	0 years, female, asian, stage:Stage I, alive, 719 days	3.2
TCGA-WJ-A86L-01A	0 years, female, white, stage:Stage I, alive, 345 days	3.1
TCGA-DD-AADL-01A	0 years, male, asian, stage:Stage I, alive, 636 days	3.1
TCGA-2Y-A9H2-01A	0 years, female, white, stage:Stage I, alive, 1731 days	3.1
TCGA-DD-A3A4-01A	0 years, male, white, stage:Stage IIIA, dead, 612 days	3.1
TCGA-BC-A10R-01A	0 years, female, white, stage:'--, dead, 308 days	3.1
TCGA-DD-A4NI-01A	0 years, male, white, stage:Stage II, alive, 816 days	3.1
TCGA-DD-AACS-01A	0 years, male, asian, stage:Stage I, alive, 1804 days	3.1
TCGA-PD-A5DF-01A	0 years, female, white, stage:Stage IIIB, dead, 639 days	3.0
TCGA-BD-A3EP-01A	0 years, female, black or african american, stage:Stage I, alive, 409 days	3.0
TCGA-UB-A7MD-01A	0 years, male, black or african american, stage:Stage I, dead, 52 days	3.0
TCGA-ZS-A9CD-01A	0 years, male, white, stage:Stage II, dead, 1386 days	3.0
TCGA-BC-A10U-01A	0 years, male, white, stage:'--, dead, 837 days	3.0
TCGA-DD-AACA-01A	0 years, male, asian, stage:Stage I, alive, 2301 days	2.9
TCGA-G3-AAV0-01A	0 years, male, asian, stage:Stage I, alive, 476 days	2.9
TCGA-DD-A73F-01A	0 years, female, white, stage:Stage I, alive, 1085 days	2.9
TCGA-DD-A3A8-01A	0 years, male, white, stage:Stage II, dead, 11 days	2.9
TCGA-DD-A4NL-01A	0 years, male, white, stage:Stage I, alive, 1711 days	2.9
TCGA-CC-A8HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 140 days	2.9
TCGA-DD-AAE0-01A	0 years, female, asian, stage:Stage IIIA, alive, 555 days	2.9
TCGA-G3-A7M5-01A	0 years, male, asian, stage:Stage I, alive, 447 days	2.9
TCGA-CC-A7IF-01A	0 years, male, asian, stage:Stage IIIA, dead, 649 days	2.8
TCGA-DD-AAVY-01A	0 years, male, asian, stage:Stage IIIA, alive, 1970 days	2.8
TCGA-G3-AAV2-01A	0 years, male, white, stage:Stage I, alive, 372 days	2.8
TCGA-DD-A4NN-01A	0 years, female, white, stage:Stage I, dead, 899 days	2.8
TCGA-KR-A7K7-01A	0 years, female, white, stage:Stage II, alive, 951 days	2.7
TCGA-DD-AADC-01A	0 years, male, asian, stage:Stage I, dead, 425 days	2.7
TCGA-MI-A75I-01A	0 years, male, black or african american, stage:'--, alive, 630 days	2.7
TCGA-DD-AAD8-01A	0 years, female, asian, stage:Stage I, alive, 1219 days	2.7
TCGA-G3-A5SL-01A	0 years, male, white, stage:Stage II, alive, 621 days	2.7
TCGA-CC-A5UE-01A	0 years, male, asian, stage:Stage IIIB, dead, 272 days	2.7
TCGA-G3-A25X-01A	0 years, male, asian, stage:Stage II, alive, 1779 days	2.7
TCGA-DD-AACD-01A	0 years, male, asian, stage:Stage I, dead, 381 days	2.7
TCGA-DD-AACP-01A	0 years, male, asian, stage:Stage I, alive, 415 days	2.7
TCGA-DD-AAEA-01A	0 years, male, asian, stage:Stage I, alive, 575 days	2.7
TCGA-LG-A9QC-01A	0 years, male, white, stage:Stage I, alive, 425 days	2.7
TCGA-WQ-AB4B-01A	0 years, male, white, stage:Stage II, alive, 395 days	2.6
TCGA-G3-AAV5-01A	0 years, male, white, stage:Stage II, alive, 354 days	2.6
TCGA-WX-AA46-01A	0 years, male, white, stage:Stage II, alive, 756 days	2.6
TCGA-DD-A4NG-01A	0 years, male, white, stage:Stage IIIA, dead, 802 days	2.6
TCGA-DD-A73D-01A	0 years, female, white, stage:Stage II, alive, 693 days	2.6
TCGA-CC-A7II-01A	0 years, male, asian, stage:Stage IIIA, alive, 399 days	2.6
TCGA-DD-AAD2-01A	0 years, male, asian, stage:Stage I, alive, 658 days	2.6
TCGA-G3-A5SM-01A	0 years, male, white, stage:Stage II, alive, 520 days	2.5
TCGA-RG-A7D4-01A	0 years, male, black or african american, stage:Stage II, alive, 1098 days	2.5
TCGA-RC-A7S9-01A	0 years, female, asian, stage:Stage I, alive, 640 days	2.4
TCGA-BC-A10Z-01A	0 years, female, white, stage:Stage I, dead, 34 days	2.4
TCGA-G3-AAUZ-01A	0 years, male, stage:Stage I, alive, 480 days	2.4
TCGA-EP-A2KC-01A	0 years, male, black or african american, stage:Stage I, dead, 19 days	2.4
TCGA-DD-AAVQ-01A	0 years, male, asian, stage:Stage I, alive, 2728 days	2.4
TCGA-RC-A7SH-01A	0 years, male, asian, stage:Stage II, alive, 468 days	2.4
TCGA-CC-A8HU-01A	0 years, female, asian, stage:Stage IIIA, dead, 344 days	2.3
TCGA-G3-A3CH-01A	0 years, male, asian, stage:Stage IIIA, alive, 780 days	2.3
TCGA-HP-A5MZ-01A	0 years, male, stage:Stage I, dead, 91 days	2.3
TCGA-KR-A7K8-01A	0 years, male, stage:Stage I, alive, 906 days	2.3
TCGA-BC-A110-01A	0 years, female, black or african american, stage:'--, dead, 2116 days	2.3
TCGA-G3-A5SJ-01A	0 years, male, white, stage:Stage I, alive, 698 days	2.3
TCGA-ED-A7XO-01A	0 years, male, asian, stage:Stage IIIA, alive, 427 days	2.3
TCGA-G3-A25V-01A	0 years, male, white, stage:Stage I, alive, 860 days	2.3
TCGA-UB-A7MF-01A	0 years, male, white, stage:Stage IIIA, dead, 214 days	2.3
TCGA-2Y-A9H9-01A	0 years, male, white, stage:Stage I, alive, 697 days	2.3
TCGA-FV-A495-01A	0 years, female, white, stage:Stage II, alive, 1 days	2.2
TCGA-DD-AAVV-01A	0 years, male, asian, stage:Stage II, alive, 2455 days	2.2
TCGA-DD-A3A7-01A	0 years, male, stage:Stage IIIB, dead, 419 days	2.2
TCGA-MI-A75G-01A	0 years, male, white, stage:Stage II, alive, 698 days	2.2
TCGA-MR-A8JO-01A	0 years, male, white, stage:Stage I, alive, 330 days	2.2
TCGA-DD-AAEH-01A	0 years, male, asian, stage:Stage I, alive, 784 days	2.2
TCGA-ED-A7PZ-01A	0 years, male, asian, stage:Stage II, alive, 6 days	2.2
TCGA-MI-A75E-01A	0 years, male, white, stage:Stage IIIC, alive, 507 days	2.1
TCGA-DD-AACZ-01A	0 years, female, asian, stage:Stage I, dead, 171 days	2.1
TCGA-FV-A2QQ-01A	0 years, male, white, stage:Stage I, alive, 729 days	2.1
TCGA-DD-AACE-01A	0 years, male, asian, stage:Stage I, alive, 2184 days	2.1
TCGA-DD-AAEI-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	2.1
TCGA-DD-AACT-01A	0 years, female, asian, stage:Stage I, alive, 1562 days	2.1
TCGA-DD-AACX-01A	0 years, male, asian, stage:Stage II, alive, 170 days	2.1
TCGA-2Y-A9H1-01A	0 years, male, white, stage:Stage I, dead, 1229 days	2.1
TCGA-DD-AADG-01A	0 years, male, asian, stage:Stage IIIA, alive, 1145 days	2.1
TCGA-CC-A7IG-01A	0 years, male, asian, stage:Stage II, dead, 299 days	2.0
TCGA-G3-A25T-01A	0 years, female, white, stage:Stage IIIA, alive, 1553 days	2.0
TCGA-G3-A3CJ-01A	0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	2.0
TCGA-DD-AAE9-01A	0 years, male, asian, stage:Stage I, alive, 722 days	2.0
TCGA-FV-A3I0-01A	0 years, female, white, stage:Stage II, alive, 848 days	2.0
TCGA-DD-A39Z-01A	0 years, female, stage:Stage II, dead, 601 days	2.0
TCGA-XR-A8TD-01A	0 years, female, white, stage:Stage IIIB, alive, 1030 days	2.0
TCGA-CC-A7IL-01A	0 years, male, asian, stage:Stage IIIA, dead, 278 days	2.0
TCGA-CC-5262-01A	0 years, male, asian, stage:Stage IIIC, dead, 103 days	2.0
TCGA-RC-A7SK-01A	0 years, male, asian, stage:Stage I, alive, 472 days	2.0
TCGA-DD-AADN-01A	0 years, male, asian, stage:Stage I, alive, 898 days	2.0
TCGA-BC-A3KF-01A	0 years, female, white, stage:Stage I, alive, 8 days	2.0
TCGA-NI-A4U2-01A	0 years, male, white, stage:Stage IIIA, dead, 1791 days	1.9
TCGA-EP-A3JL-01A	0 years, male, white, stage:Stage I, alive, 303 days	1.9
TCGA-EP-A2KB-01A	0 years, female, white, stage:Stage I, dead, 596 days	1.9
TCGA-CC-A9FS-01A	0 years, male, asian, stage:Stage II, alive, 211 days	1.9
TCGA-DD-AAW3-01A	0 years, male, asian, stage:Stage I, alive, 1633 days	1.9
TCGA-DD-A119-01A	0 years, male, asian, stage:Stage IV, dead, 223 days	1.9
TCGA-BC-A69H-01A	0 years, male, white, stage:Stage II, alive, 444 days	1.9
TCGA-ZS-A9CE-01A	0 years, female, white, stage:Stage II, alive, 1241 days	1.9
TCGA-CC-A5UC-01A	0 years, male, asian, stage:Stage IIIA, dead, 347 days	1.9
TCGA-RC-A7SB-01A	0 years, male, asian, stage:Stage II, alive, 588 days	1.8
TCGA-CC-A3MC-01A	0 years, male, asian, stage:Stage IIIA, alive, 363 days	1.8
TCGA-ED-A7XP-01A	0 years, female, asian, stage:Stage II, alive, 400 days	1.8
TCGA-DD-A3A1-01A	0 years, male, stage:Stage IIIA, dead, 233 days	1.8
TCGA-CC-A8HV-01A	0 years, female, asian, stage:Stage II, dead, 279 days	1.8
TCGA-MI-A75H-01A	0 years, male, white, stage:'--, alive, 747 days	1.8
TCGA-WX-AA47-01A	0 years, female, white, stage:Stage IIIA, dead, 556 days	1.8
TCGA-DD-AAE7-01A	0 years, male, asian, stage:Stage I, alive, 644 days	1.8
TCGA-DD-AAVX-01A	0 years, male, asian, stage:Stage II, alive, 1718 days	1.8
TCGA-BW-A5NO-01A	0 years, male, black or african american, stage:Stage IIIA, alive, 20 days	1.8
TCGA-2Y-A9H0-01A	0 years, male, white, stage:Stage IIIA, alive, 3675 days	1.8
TCGA-DD-AACC-01A	0 years, male, asian, stage:Stage I, dead, 1685 days	1.8
TCGA-EP-A2KA-01A	0 years, female, white, stage:Stage IIIA, dead, 627 days	1.7
TCGA-DD-A39Y-01A	0 years, male, asian, stage:Stage I, dead, 171 days	1.7
TCGA-DD-A1EG-01A	0 years, male, white, stage:Stage I, dead, 1372 days	1.7
TCGA-MI-A75C-01A	0 years, male, white, stage:Stage I, alive, 291 days	1.7
TCGA-CC-5259-01A	0 years, female, asian, stage:Stage IIIC, alive, 250 days	1.7
TCGA-5C-AAPD-01A	0 years, male, asian, stage:Stage II, alive, 20 days	1.7
TCGA-DD-AACF-01A	0 years, male, asian, stage:Stage I, dead, 365 days	1.7
TCGA-WQ-A9G7-01A	0 years, female, white, stage:'--, alive, 30 days	1.7
TCGA-DD-A39X-01A	0 years, female, white, stage:Stage I, dead, 1694 days	1.7
TCGA-DD-A1EL-01A	0 years, male, black or african american, stage:Stage II, dead, 415 days	1.6
TCGA-ED-A459-01A	0 years, male, asian, stage:Stage II, alive, 910 days	1.6
TCGA-DD-AAE6-01A	0 years, female, asian, stage:Stage I, alive, 141 days	1.6
TCGA-DD-A116-01A	0 years, male, asian, stage:Stage IIIA, dead, 1622 days	1.6
TCGA-O8-A75V-01A	0 years, male, stage:Stage I, alive, 538 days	1.6
TCGA-DD-AADQ-01A	0 years, male, asian, stage:Stage II, alive, 436 days	1.5
TCGA-G3-A7M7-01A	0 years, male, white, stage:Stage I, alive, 361 days	1.5
TCGA-DD-AAC8-01A	0 years, male, asian, stage:Stage I, dead, 16 days	1.5
TCGA-LG-A9QD-01A	0 years, male, white, stage:Stage IIIA, alive, 366 days	1.5
TCGA-DD-AAC9-01A	0 years, male, asian, stage:Stage I, alive, 347 days	1.5
TCGA-XR-A8TF-01A	0 years, male, white, stage:Stage I, dead, 693 days	1.4
TCGA-DD-AADF-01A	0 years, female, asian, stage:Stage I, dead, 115 days	1.4
TCGA-DD-AADR-01A	0 years, male, asian, stage:Stage I, alive, 2028 days	1.4
TCGA-DD-A4NQ-01A	0 years, male, white, stage:Stage II, dead, 373 days	1.4
TCGA-DD-A3A5-01A	0 years, female, white, stage:Stage III, dead, 3125 days	1.4
TCGA-DD-AACJ-01A	0 years, male, asian, stage:Stage II, alive, 2102 days	1.4
TCGA-EP-A3RK-01A	0 years, male, white, stage:Stage IIIA, alive, 363 days	1.4
TCGA-RC-A6M6-01A	0 years, male, white, stage:Stage II, alive, 9 days	1.4
TCGA-DD-AAD5-01A	0 years, male, asian, stage:Stage I, alive, 1345 days	1.4
TCGA-DD-AAE3-01A	0 years, male, asian, stage:Stage I, alive, 566 days	1.3
TCGA-DD-A39V-01A	0 years, male, white, stage:Stage II, dead, 643 days	1.3
TCGA-RC-A7SF-01A	0 years, male, asian, stage:Stage I, alive, 579 days	1.2
TCGA-DD-AADK-01A	0 years, female, asian, stage:Stage II, alive, 1049 days	1.2
TCGA-FV-A4ZP-01A	0 years, male, white, stage:Stage IIIA, dead, 2486 days	1.2
TCGA-DD-AAVU-01A	0 years, male, asian, stage:Stage II, alive, 2202 days	1.2
TCGA-2Y-A9GY-01A	0 years, female, white, stage:Stage II, dead, 757 days	1.2
TCGA-K7-A6G5-01A	0 years, male, white, stage:Stage I, alive, 512 days	1.2
TCGA-G3-A25S-01A	0 years, male, white, stage:Stage I, dead, 416 days	1.2
TCGA-DD-AAEE-01A	0 years, male, asian, stage:Stage I, alive, 810 days	1.2
TCGA-BC-A69I-01A	0 years, male, white, stage:Stage I, alive, 387 days	1.1
TCGA-DD-AAVR-01A	0 years, male, asian, stage:Stage I, alive, 2513 days	1.1
TCGA-DD-AAVP-01A	0 years, male, asian, stage:Stage I, alive, 2752 days	1.1
TCGA-NI-A8LF-01A	0 years, male, white, stage:Stage I, alive, 799 days	1.1
TCGA-ES-A2HT-01A	0 years, male, black or african american, stage:Stage I, dead, 438 days	1.1
TCGA-G3-A25Z-01A	0 years, male, asian, stage:Stage I, alive, 655 days	1.0
TCGA-CC-A7IE-01A	0 years, male, asian, stage:Stage IIIA, dead, 217 days	1.0
TCGA-2Y-A9H4-01A	0 years, male, black or african american, stage:Stage I, alive, 1452 days	0.9
TCGA-DD-AADU-01A	0 years, male, asian, stage:Stage II, alive, 554 days	0.8
TCGA-DD-AADM-01A	0 years, male, asian, stage:Stage II, dead, 12 days	0.7
TCGA-DD-AAED-01A	0 years, male, asian, stage:Stage I, alive, 763 days	0.6
TCGA-DD-A3A3-01A	0 years, male, asian, stage:Stage I, dead, 535 days	0.3
TCGA-DD-AAD6-01A	0 years, male, asian, stage:Stage IIIA, alive, 672 days	0.3
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off". Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation. Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient. & Survival analysisⁱ Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
647	Tumor	1.2
383	Tumor	1.2
671	Tumor	1.1
533	Tumor	1.0
722	Normal	0.9
743	Tumor	0.9
416	Normal	0.9
967	Tumor	0.9
396	Normal	0.9
394	Normal	0.8
917	Tumor	0.8
388	Normal	0.7
975	Tumor	0.7
983	Tumor	0.7
554	Normal	0.7
921	Tumor	0.7
714	Normal	0.7
497	Tumor	0.7
724	Normal	0.6
386	Normal	0.6
925	Tumor	0.6
375	Tumor	0.6
661	Tumor	0.6
466	Normal	0.6
851	Tumor	0.5
963	Tumor	0.5
391	Tumor	0.5
456	Normal	0.5
665	Tumor	0.5
484	Normal	0.5
696	Normal	0.5
364	Normal	0.5
392	Normal	0.5
112	Tumor	0.5
568	Normal	0.5
464	Normal	0.5
393	Tumor	0.4
413	Tumor	0.4
663	Tumor	0.4
923	Tumor	0.4
527	Tumor	0.4
494	Normal	0.4
384	Normal	0.4
744	Normal	0.4
395	Tumor	0.4
721	Tumor	0.4
716	Normal	0.4
1013	Tumor	0.3
298	Normal	0.3
232	Normal	0.3
916	Normal	0.3
387	Tumor	0.3
815	Tumor	0.3
977	Tumor	0.3
123	Tumor	0.3
425	Tumor	0.3
982	Normal	0.3
564	Normal	0.3
1014	Normal	0.3
385	Tumor	0.3
981	Tumor	0.3
1016	Normal	0.3
978	Normal	0.3
957	Tumor	0.3
553	Tumor	0.3
452	Normal	0.3
777	Tumor	0.3
297	Tumor	0.2
968	Normal	0.2
513	Tumor	0.2
525	Tumor	0.2
427	Tumor	0.2
368	Normal	0.2
526	Normal	0.2
635	Tumor	0.2
756	Normal	0.2
482	Normal	0.2
1015	Tumor	0.2
572	Normal	0.2
517	Tumor	0.2
745	Tumor	0.2
984	Normal	0.2
172	Normal	0.2
523	Tumor	0.2
366	Normal	0.2
816	Normal	0.2
362	Normal	0.2
524	Normal	0.2
965	Tumor	0.2
958	Normal	0.2
258	Normal	0.2
534	Normal	0.2
574	Normal	0.2
686	Normal	0.2
672	Normal	0.2
332	Normal	0.1
617	Tumor	0.1
277	Tumor	0.1
162	Normal	0.1
278	Normal	0.1
858	Normal	0.1
365	Tumor	0.1
814	Normal	0.1
313	Tumor	0.1
487	Tumor	0.1
426	Normal	0.1
918	Normal	0.1
314	Normal	0.1
311	Tumor	0.1
813	Tumor	0.1
755	Tumor	0.1
271	Tumor	0.1
492	Normal	0.1
465	Tumor	0.1
824	Normal	0.1
331	Tumor	0.1
662	Normal	0.1
468	Normal	0.1
976	Normal	0.1
924	Normal	0.1
428	Normal	0.1
964	Normal	0.1
493	Tumor	0.1
713	Tumor	0.1
538	Normal	0.1
367	Tumor	0.1
546	Normal	0.1
515	Tumor	0.1
545	Tumor	0.1
186	Normal	0.1
447	Tumor	0.1
785	Tumor	0.1
664	Normal	0.1
462	Normal	0.1
558	Normal	0.0
786	Normal	0.0
125	Tumor	0.0
817	Tumor	0.0
746	Normal	0.0
641	Tumor	0.0
1043	Tumor	0.0
966	Normal	0.0
648	Normal	0.0
356	Normal	0.0
818	Normal	0.0
268	Normal	0.0
412	Normal	0.0
518	Normal	0.0
516	Normal	0.0
857	Tumor	0.0
414	Normal	0.0
231	Tumor	0.0
738	Normal	0.0
915	Tumor	-0.1
448	Normal	-0.1
423	Tumor	-0.1
742	Normal	-0.1
262	Normal	-0.1
778	Normal	-0.1
148	Normal	-0.1
514	Normal	-0.1
472	Normal	-0.1
728	Normal	-0.1
922	Normal	-0.1
926	Normal	-0.1
483	Tumor	-0.1
312	Normal	-0.1
488	Normal	-0.1
573	Tumor	-0.1
451	Tumor	-0.1
188	Normal	-0.1
424	Normal	-0.1
328	Normal	-0.1
1045	Tumor	-0.1
536	Normal	-0.2
376	Normal	-0.2
257	Tumor	-0.2
571	Tumor	-0.2
124	Normal	-0.2
615	Tumor	-0.2
467	Tumor	-0.2
126	Normal	-0.2
261	Tumor	-0.2
723	Tumor	-0.2
113	Tumor	-0.2
478	Normal	-0.2
474	Normal	-0.2
111	Normal	-0.2
267	Tumor	-0.3
463	Tumor	-0.3
422	Normal	-0.3
114	Normal	-0.3
697	Tumor	-0.3
421	Tumor	-0.3
187	Tumor	-0.3
852	Normal	-0.3
272	Normal	-0.3
147	Tumor	-0.3
567	Tumor	-0.3
557	Tumor	-0.3
498	Normal	-0.3
128	Normal	-0.3
481	Tumor	-0.3
361	Tumor	-0.3
642	Normal	-0.3
127	Tumor	-0.4
535	Tumor	-0.4
666	Normal	-0.4
636	Normal	-0.4
823	Tumor	-0.4
715	Tumor	-0.4
618	Normal	-0.4
563	Tumor	-0.4
1046	Normal	-0.4
491	Tumor	-0.4
537	Tumor	-0.4
914	Normal	-0.4
1044	Normal	-0.4
884	Normal	-0.4
685	Tumor	-0.5
185	Tumor	-0.5
455	Tumor	-0.5
415	Tumor	-0.5
912	Normal	-0.5
877	Tumor	-0.5
695	Tumor	-0.5
616	Normal	-0.5
461	Tumor	-0.6
473	Tumor	-0.6
698	Normal	-0.6
171	Tumor	-0.6
627	Tumor	-0.7
628	Normal	-0.7
411	Tumor	-0.7
327	Tumor	-0.7
882	Normal	-0.7
161	Tumor	-0.7
363	Tumor	-0.7
727	Tumor	-0.7
741	Tumor	-0.8
528	Normal	-0.8
878	Normal	-0.9
477	Tumor	-0.9
737	Tumor	-0.9
881	Tumor	-1.0
471	Tumor	-1.0
883	Tumor	-1.0
913	Tumor	-1.0
911	Tumor	-1.2
355	Tumor	-1.2
351	Tumor	N/A
352	Normal	N/A
353	Tumor	N/A
354	Normal	N/A
357	Tumor	N/A
358	Normal	N/A
131	Tumor	N/A
132	Normal	N/A
135	Tumor	N/A
136	Normal	N/A
137	Tumor	N/A
138	Normal	N/A
937	Tumor	N/A
938	Normal	N/A
141	Tumor	N/A
142	Normal	N/A
145	Tumor	N/A
146	Normal	N/A
943	Tumor	N/A
944	Normal	N/A
1022	Normal	N/A
1021	Tumor	N/A
951	Tumor	N/A
952	Normal	N/A
953	Tumor	N/A
954	Normal	N/A
955	Tumor	N/A
956	Normal	N/A
1032	Normal	N/A
1031	Tumor	N/A
283	Tumor	N/A
284	Normal	N/A
285	Tumor	N/A
286	Normal	N/A
1028	Normal	N/A
1027	Tumor	N/A
1026	Normal	N/A
1025	Tumor	N/A
1042	Normal	N/A
1041	Tumor	N/A
861	Tumor	N/A
862	Normal	N/A
863	Tumor	N/A
864	Normal	N/A
865	Tumor	N/A
866	Normal	N/A
867	Tumor	N/A
868	Normal	N/A
191	Tumor	N/A
192	Normal	N/A
195	Tumor	N/A
196	Normal	N/A
873	Tumor	N/A
874	Normal	N/A
431	Tumor	N/A
432	Normal	N/A
433	Tumor	N/A
434	Normal	N/A
435	Tumor	N/A
436	Normal	N/A
443	Tumor	N/A
444	Normal	N/A
445	Tumor	N/A
446	Normal	N/A
211	Tumor	N/A
212	Normal	N/A
213	Tumor	N/A
214	Normal	N/A
217	Tumor	N/A
218	Normal	N/A
341	Tumor	N/A
221	Tumor	N/A
342	Normal	N/A
222	Normal	N/A
343	Tumor	N/A
223	Tumor	N/A
344	Normal	N/A
224	Normal	N/A
227	Tumor	N/A
228	Normal	N/A
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA048970
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS