HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:57.0 nTPM
HPA Brain:36.2 nTPM
GTEx:57.0 nTPM
FANTOM5:53.8 Scaled Tags Per Million
Pig:19.0 nTPM
Mouse:59.1 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044294
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 36.2
Sample id Sample description nTPM
Hippocampus
nTPM: 34.9
1898 Male, age 80, left hemisphere 37.0
2148 Female, age 91, left hemisphere 37.0
2529 Female, age 94, left hemisphere 36.5
2621 Female, age 67, right hemisphere 33.9
1911 Female, age 85, right hemisphere 32.8
1855 Male, age 76, left hemisphere 32.3
Dentate gyrus
nTPM: 35.1
2530 Female, age 94, left hemisphere 43.1
2528 Male, age 74, both hemispheres 40.3
2010 Male, age 76, both hemispheres 39.0
1927 Female, age 91, both hemispheres 30.4
2246 Female, age 85, both hemispheres 29.9
2531 Female, age 67, both hemispheres 28.1
Entorhinal gyrus
nTPM: 30.2
2764 Male, age 80, right hemisphere 33.7
2117 Female, age 91, right hemisphere 31.0
1787 Male, age 76, left hemisphere 30.8
1938 Female, age 85, left hemisphere 30.3
2686 Male, age 75, right hemisphere 29.9
2613 Female, age 94, left hemisphere 25.2
Hippocampus, CA1
nTPM: 34.0
2749 Male, age 80, left hemisphere 42.4
1873 Female, age 85, both hemispheres 34.2
2082 Female, age 91, right hemisphere 33.7
2527 Male, age 74, both hemispheres 33.0
2045 Male, age 76, both hemispheres 27.0
Hippocampus, CA2
nTPM: 36.2
1963 Male, age 80, left hemisphere 44.4
2249 Male, age 74, both hemispheres 40.2
1892 Male, age 76, both hemispheres 34.7
2437 Female, age 94, left hemisphere 33.9
2113 Female, age 91, right hemisphere 32.2
1940 Female, age 85, left hemisphere 31.9
Hippocampus, CA3
nTPM: 32.8
2436 Male, age 74, both hemispheres 35.9
2137 Male, age 80, left hemisphere 35.1
1867 Male, age 76, both hemispheres 33.3
2620 Female, age 94, left hemisphere 33.3
2861 Female, age 67, both hemispheres 30.3
1891 Female, age 85, both hemispheres 28.7
Parahippocampal cortex
nTPM: 31.0
2532 Female, age 72, left hemisphere 33.3
2692 Male, age 74, both hemispheres 33.3
2245 Female, age 91, both hemispheres 33.0
2018 Male, age 76, both hemispheres 32.3
1990 Female, age 91, right hemisphere 32.0
1850 Male, age 80, both hemispheres 31.3
2250 Female, age 67, right hemisphere 30.8
2622 Female, age 67, right hemisphere 29.8
1933 Female, age 85, both hemispheres 29.4
2693 Female, age 94, both hemispheres 24.9
Perirhinal gyrus
nTPM: 30.7
1794 Male, age 80, right hemisphere 37.4
1847 Female, age 91, left hemisphere 33.3
1841 Female, age 85, right hemisphere 29.6
2521 Female, age 94, right hemisphere 27.2
2848 Male, age 76, right hemisphere 26.1
Subiculum
nTPM: 32.7
2619 Male, age 74, both hemispheres 35.5
1977 Female, age 85, both hemispheres 35.2
2438 Female, age 94, left hemisphere 35.1
2729 Female, age 91, right hemisphere 31.9
2042 Male, age 76, both hemispheres 30.1
1901 Male, age 80, both hemispheres 28.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 57.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.0
Samples: 197

Max nTPM: 88.4
Min nTPM: 27.7
Std nTPM: 10.7
Median nTPM: 56.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 88.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 85.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 82.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 77.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 77.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 76.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 75.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 75.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 75.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 74.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 74.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 53.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.8
FF:10169-103B7 60 years, female 59.1
FF:10153-102I9 76 years, female 48.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 19.0
Pig sample Sample description nTPM
Subiculum
nTPM: 17.0
Samples: 4

Max nTPM: 20.9
Min nTPM: 14.6
Sample A Female 20.9
Sample B Female 14.6
Sample C Male 17.2
Sample D Male 15.1
Dorsal hippocampus
nTPM: 19.0
Samples: 4

Max nTPM: 25.6
Min nTPM: 13.9
Sample A Female 25.6
Sample B Female 17.5
Sample C Male 19.0
Sample D Male 13.9
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.1
Sample A Female 15.2
Sample B Female 16.9
Sample C Male 17.1
Sample D Male 13.1
Ventral hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 21.6
Min nTPM: 14.1
Sample A Female 18.5
Sample B Female 14.1
Sample C Male 21.6
Sample D Male 20.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 59.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.1
Samples: 4

Max nTPM: 61.7
Min nTPM: 56.6
Sample A Male 61.7
Sample B Male 58.0
Sample C Female 56.6
Sample D Female 59.9
Hippocampal formation
nTPM: 50.1
Samples: 4

Max nTPM: 55.4
Min nTPM: 45.1
Sample A Male 53.3
Sample B Male 46.4
Sample C Female 45.1
Sample D Female 55.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
100144110 Antisense, RP_110407_03_A09, Mouse strain C57BL/6J (56 days, male) 0.6

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