HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:3.6 nTPM
HPA Brain:82.9 nTPM
GTEx:3.6 nTPM
FANTOM5:47.3 Scaled Tags Per Million
Pig:40.5 nTPM
Mouse:9.3 nTPM
Allen mouse:9.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003180
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 82.9
Sample id Sample description nTPM
Hippocampus
nTPM: 82.0
2529 Female, age 94, left hemisphere 92.5
2148 Female, age 91, left hemisphere 88.1
2621 Female, age 67, right hemisphere 84.7
1911 Female, age 85, right hemisphere 84.4
1898 Male, age 80, left hemisphere 71.3
1855 Male, age 76, left hemisphere 70.9
Dentate gyrus
nTPM: 78.9
2531 Female, age 67, both hemispheres 93.8
2246 Female, age 85, both hemispheres 84.0
1927 Female, age 91, both hemispheres 75.9
2530 Female, age 94, left hemisphere 74.9
2528 Male, age 74, both hemispheres 74.7
2010 Male, age 76, both hemispheres 69.8
Entorhinal gyrus
nTPM: 82.9
2764 Male, age 80, right hemisphere 90.2
2117 Female, age 91, right hemisphere 89.0
2686 Male, age 75, right hemisphere 82.3
1787 Male, age 76, left hemisphere 80.0
2613 Female, age 94, left hemisphere 79.9
1938 Female, age 85, left hemisphere 75.9
Hippocampus, CA1
nTPM: 79.7
2082 Female, age 91, right hemisphere 89.3
2527 Male, age 74, both hemispheres 80.1
2749 Male, age 80, left hemisphere 79.8
1873 Female, age 85, both hemispheres 75.0
2045 Male, age 76, both hemispheres 74.2
Hippocampus, CA2
nTPM: 78.7
2113 Female, age 91, right hemisphere 88.5
2437 Female, age 94, left hemisphere 81.6
1940 Female, age 85, left hemisphere 81.2
1963 Male, age 80, left hemisphere 79.6
2249 Male, age 74, both hemispheres 74.0
1892 Male, age 76, both hemispheres 67.2
Hippocampus, CA3
nTPM: 78.1
2620 Female, age 94, left hemisphere 87.3
2137 Male, age 80, left hemisphere 84.0
2861 Female, age 67, both hemispheres 81.2
2436 Male, age 74, both hemispheres 78.6
1891 Female, age 85, both hemispheres 77.8
1867 Male, age 76, both hemispheres 60.0
Parahippocampal cortex
nTPM: 79.9
2245 Female, age 91, both hemispheres 87.4
2622 Female, age 67, right hemisphere 85.0
2692 Male, age 74, both hemispheres 83.3
2532 Female, age 72, left hemisphere 80.7
1933 Female, age 85, both hemispheres 80.4
1990 Female, age 91, right hemisphere 79.4
2693 Female, age 94, both hemispheres 77.4
2018 Male, age 76, both hemispheres 75.7
1850 Male, age 80, both hemispheres 75.3
2250 Female, age 67, right hemisphere 73.9
Perirhinal gyrus
nTPM: 77.9
1794 Male, age 80, right hemisphere 80.4
2848 Male, age 76, right hemisphere 79.5
2521 Female, age 94, right hemisphere 78.6
1841 Female, age 85, right hemisphere 77.2
1847 Female, age 91, left hemisphere 74.0
Subiculum
nTPM: 80.8
2438 Female, age 94, left hemisphere 90.8
2619 Male, age 74, both hemispheres 84.5
1901 Male, age 80, both hemispheres 80.9
2729 Female, age 91, right hemisphere 80.2
1977 Female, age 85, both hemispheres 79.2
2042 Male, age 76, both hemispheres 69.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.6
Samples: 197

Max nTPM: 8.5
Min nTPM: 1.4
Std nTPM: 0.8
Median nTPM: 3.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 8.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 6.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 6.0
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 6.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 5.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 5.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 5.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 5.4
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 5.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 5.1
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 5.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 47.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.3
FF:10153-102I9 76 years, female 62.4
FF:10169-103B7 60 years, female 32.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 40.5
Pig sample Sample description nTPM
Subiculum
nTPM: 39.5
Samples: 4

Max nTPM: 43.2
Min nTPM: 37.3
Sample A Female 43.2
Sample B Female 37.7
Sample C Male 39.7
Sample D Male 37.3
Dorsal hippocampus
nTPM: 38.7
Samples: 4

Max nTPM: 41.6
Min nTPM: 36.6
Sample A Female 37.8
Sample B Female 41.6
Sample C Male 38.7
Sample D Male 36.6
Entorhinal cortex
nTPM: 40.5
Samples: 4

Max nTPM: 43.8
Min nTPM: 37.6
Sample A Female 43.8
Sample B Female 37.6
Sample C Male 37.6
Sample D Male 42.9
Ventral hippocampus
nTPM: 39.6
Samples: 4

Max nTPM: 45.2
Min nTPM: 35.0
Sample A Female 35.0
Sample B Female 36.1
Sample C Male 42.1
Sample D Male 45.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 9.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 12.8
Min nTPM: 6.6
Sample A Male 7.2
Sample B Male 10.9
Sample C Female 6.6
Sample D Female 12.8
Hippocampal formation
nTPM: 7.6
Samples: 4

Max nTPM: 10.7
Min nTPM: 4.4
Sample A Male 4.4
Sample B Male 7.5
Sample C Female 10.7
Sample D Female 7.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.1
77620491 Antisense, RP_070129_03_E08, Mouse strain C57BL/6J (56 days, male) 9.1

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