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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDGFB is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
49.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
25.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
22.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
15.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
14.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
13.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
13.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
13.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
13.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
12.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
12.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
11.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
11.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
11.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
10.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
10.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
10.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
10.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
9.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
9.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
9.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
8.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
7.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
7.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
6.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
6.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
5.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
5.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
5.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
5.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
4.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
4.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
4.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
3.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
3.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
3.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
3.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
3.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
3.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
2.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
2.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDGFB is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
123.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
99.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
92.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
91.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
88.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
85.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
84.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
76.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
76.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
75.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
72.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
71.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
70.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
69.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
68.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
67.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
66.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
66.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
64.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
64.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
63.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
62.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
62.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
62.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
61.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
59.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
57.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
57.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
57.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
56.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
56.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
55.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
54.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
54.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
53.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
52.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
52.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
52.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
52.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
52.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
51.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
51.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
51.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
51.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
51.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
51.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
50.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
50.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
50.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
49.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
49.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
49.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
49.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
49.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
48.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
48.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
48.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
47.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
47.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
47.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
46.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
46.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
46.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
45.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
45.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
45.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
45.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
45.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
44.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
44.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
44.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
44.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
44.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
44.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
43.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
43.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
43.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
43.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
41.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
41.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
41.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
41.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
41.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
41.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
41.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
41.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
41.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
40.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
40.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
40.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
40.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
40.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
40.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
40.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
40.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
39.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
39.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
39.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
39.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
39.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
39.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
39.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
39.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
39.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
38.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
38.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
38.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
38.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
37.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
37.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
37.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
37.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
37.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
36.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
36.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
36.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
36.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
36.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
36.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
36.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
36.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
36.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
35.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
35.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
35.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
35.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
35.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
34.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
34.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
34.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
34.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
34.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
34.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
34.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
34.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
34.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
34.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
34.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
34.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
34.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
34.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
34.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
34.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
33.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
33.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
33.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
33.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
33.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
33.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
33.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
33.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
33.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
33.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
33.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
33.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
33.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
32.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
32.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
32.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
32.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
32.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
32.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
32.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
32.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
32.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
31.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
31.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
31.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
31.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
31.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
31.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
31.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
31.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
30.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
30.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
30.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
30.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
30.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
30.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
30.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
30.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
30.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
30.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
30.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
30.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
30.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
29.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
29.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
29.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
29.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
29.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
29.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
29.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
29.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
29.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
29.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
29.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
29.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
29.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
28.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
28.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
28.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
28.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
28.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
28.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
28.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
28.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
27.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
27.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
27.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
27.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
27.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
27.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
27.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
27.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
27.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
27.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
27.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
27.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
27.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
27.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
26.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
26.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
26.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
26.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
26.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
26.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
26.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
26.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
26.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
26.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
26.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
26.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
26.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
26.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
26.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
26.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
26.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
25.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
25.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
25.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
25.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
25.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
25.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
25.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
25.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
25.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
24.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
24.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
24.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
24.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
24.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
24.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
24.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
24.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
24.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
24.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
24.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
24.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
24.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
24.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
23.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
23.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
23.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
23.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
23.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
23.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
22.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
22.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
22.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
22.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
22.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
22.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
22.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
22.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
22.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
21.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
21.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
21.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
21.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
21.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
21.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
21.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
21.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
21.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
21.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
20.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
20.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
20.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
20.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
20.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
20.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
20.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
20.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
20.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
20.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
20.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
20.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
20.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
20.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
19.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
19.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
19.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
19.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
19.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
19.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
19.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
19.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
19.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
19.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
19.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
18.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
18.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
18.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
18.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
18.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
18.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
18.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
18.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
18.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
18.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
18.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
18.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
18.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
17.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
17.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
17.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
17.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
17.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
17.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
17.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
17.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
17.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
17.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
17.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
16.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
16.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
16.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
16.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
16.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
16.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
16.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
16.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
16.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
16.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
16.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
16.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
16.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
16.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
16.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
15.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
15.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
15.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
15.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
15.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
15.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
15.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
15.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
15.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
15.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
15.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
14.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
14.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
14.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
14.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
14.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
14.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
14.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
14.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
14.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
14.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
14.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
14.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
14.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
13.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
13.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
13.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
13.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
13.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
13.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
13.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
13.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
12.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
12.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
12.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
12.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
12.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
11.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
11.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
11.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
11.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
11.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
10.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
10.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
9.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
9.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
9.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
9.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
9.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
8.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
8.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
8.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
8.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
8.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
7.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
7.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
7.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
7.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
6.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
6.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
6.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
6.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
6.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
6.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
6.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
5.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
5.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
5.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
5.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
5.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
5.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
4.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
4.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
4.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
4.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
4.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
3.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
3.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
3.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
3.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
3.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
3.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
3.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
2.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
2.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDGFB is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
180.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
66.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
63.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
61.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
57.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
57.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
52.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
50.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
50.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
48.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
47.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
46.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
45.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
44.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
44.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
41.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
41.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
41.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
40.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
39.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
38.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
37.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
35.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
35.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
35.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
35.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
34.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
33.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
32.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
31.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
30.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
30.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
30.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
30.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
30.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
30.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
30.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
29.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
29.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
29.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
28.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
28.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
28.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
28.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
27.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
25.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
25.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
25.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
24.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
24.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
24.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
23.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
22.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
21.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
21.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
21.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
21.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
21.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
20.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
18.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
18.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
18.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
17.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
16.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
16.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
16.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
16.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
15.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
14.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
12.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
11.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
11.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
9.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
9.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
9.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
8.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
8.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
8.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
7.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
6.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
6.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
6.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
6.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
5.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
5.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
5.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
3.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
3.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDGFB is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
38.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
31.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
31.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
27.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
22.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
22.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
22.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
19.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
18.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
18.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
18.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
17.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
17.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
16.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
15.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
15.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
14.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
14.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
14.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
14.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
13.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
13.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
13.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
13.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
13.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
13.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
12.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
12.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
12.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
12.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
12.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
12.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
12.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
11.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
11.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
11.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
11.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
11.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
11.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
10.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
10.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
10.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
10.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
10.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
10.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
10.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
10.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
9.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
9.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
9.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
9.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
9.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
9.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
9.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
9.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
8.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
8.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
8.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
8.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
8.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
8.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
8.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
8.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
8.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
8.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
8.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
8.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
8.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
8.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
8.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
7.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
7.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
7.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
7.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
7.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
7.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
7.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
7.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
7.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
7.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
7.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
7.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
7.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
7.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
7.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
7.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
6.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
6.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
6.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
6.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
6.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
6.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
6.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
6.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
6.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
6.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
6.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
6.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
6.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
6.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
6.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
6.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
6.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
6.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
6.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
6.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
6.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
6.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
6.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
6.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
5.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
5.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
5.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
5.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
5.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
5.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
5.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
5.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
5.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
5.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
5.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
5.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
5.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
5.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
5.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
5.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
5.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
5.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
5.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
5.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
5.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
5.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
5.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
5.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
5.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
4.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
4.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
4.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
4.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
4.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
4.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
4.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
4.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
4.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
4.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
4.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
4.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
4.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
4.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
4.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
4.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
4.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
4.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
4.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
4.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
4.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
4.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
4.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
4.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
4.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
4.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
4.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
4.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
4.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
4.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
4.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
3.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
3.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
3.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
3.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
3.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
3.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
3.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
3.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
3.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
3.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
3.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
3.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
3.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
3.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
3.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
3.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
3.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
3.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
3.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
3.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
3.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
3.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
3.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
3.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
3.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
3.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
3.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
3.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
3.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
3.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
3.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
3.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
3.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
3.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
3.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
3.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
3.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
3.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
3.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
3.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
2.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
2.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
2.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
2.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
2.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
2.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
2.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
2.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
2.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
2.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
2.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
2.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
2.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
2.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
1.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
1.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
1.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
