HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:15.7 nTPM
HPA Brain:22.2 nTPM
GTEx:15.7 nTPM
FANTOM5:12.1 Scaled Tags Per Million
Pig:13.1 nTPM
Mouse:21.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035471
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 22.2
Sample id Sample description nTPM
Hippocampus
nTPM: 18.1
1898 Male, age 80, left hemisphere 22.1
2148 Female, age 91, left hemisphere 21.9
2621 Female, age 67, right hemisphere 17.8
1911 Female, age 85, right hemisphere 16.1
2529 Female, age 94, left hemisphere 16.0
1855 Male, age 76, left hemisphere 14.5
Dentate gyrus
nTPM: 20.5
1927 Female, age 91, both hemispheres 23.6
2531 Female, age 67, both hemispheres 23.4
2530 Female, age 94, left hemisphere 20.0
2010 Male, age 76, both hemispheres 19.5
2528 Male, age 74, both hemispheres 18.6
2246 Female, age 85, both hemispheres 18.1
Entorhinal gyrus
nTPM: 19.0
2764 Male, age 80, right hemisphere 21.7
2613 Female, age 94, left hemisphere 20.5
1787 Male, age 76, left hemisphere 20.3
1938 Female, age 85, left hemisphere 19.3
2686 Male, age 75, right hemisphere 16.8
2117 Female, age 91, right hemisphere 15.2
Hippocampus, CA1
nTPM: 22.0
2749 Male, age 80, left hemisphere 31.9
1873 Female, age 85, both hemispheres 22.4
2045 Male, age 76, both hemispheres 19.8
2527 Male, age 74, both hemispheres 19.7
2082 Female, age 91, right hemisphere 16.4
Hippocampus, CA2
nTPM: 19.5
1892 Male, age 76, both hemispheres 22.3
1963 Male, age 80, left hemisphere 21.8
2249 Male, age 74, both hemispheres 20.0
2437 Female, age 94, left hemisphere 19.1
2113 Female, age 91, right hemisphere 17.4
1940 Female, age 85, left hemisphere 16.5
Hippocampus, CA3
nTPM: 22.2
2620 Female, age 94, left hemisphere 27.6
2137 Male, age 80, left hemisphere 25.4
2436 Male, age 74, both hemispheres 22.6
2861 Female, age 67, both hemispheres 21.8
1867 Male, age 76, both hemispheres 20.2
1891 Female, age 85, both hemispheres 15.3
Parahippocampal cortex
nTPM: 17.3
1850 Male, age 80, both hemispheres 19.0
2250 Female, age 67, right hemisphere 18.5
2245 Female, age 91, both hemispheres 18.1
2692 Male, age 74, both hemispheres 18.1
1933 Female, age 85, both hemispheres 17.7
1990 Female, age 91, right hemisphere 17.3
2622 Female, age 67, right hemisphere 17.2
2532 Female, age 72, left hemisphere 16.7
2018 Male, age 76, both hemispheres 16.1
2693 Female, age 94, both hemispheres 14.7
Perirhinal gyrus
nTPM: 20.4
1794 Male, age 80, right hemisphere 23.9
1847 Female, age 91, left hemisphere 22.6
2521 Female, age 94, right hemisphere 20.6
1841 Female, age 85, right hemisphere 17.4
2848 Male, age 76, right hemisphere 17.3
Subiculum
nTPM: 17.7
1977 Female, age 85, both hemispheres 19.9
1901 Male, age 80, both hemispheres 19.1
2619 Male, age 74, both hemispheres 17.6
2729 Female, age 91, right hemisphere 17.4
2438 Female, age 94, left hemisphere 16.3
2042 Male, age 76, both hemispheres 15.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 15.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.7
Samples: 197

Max nTPM: 40.5
Min nTPM: 3.6
Std nTPM: 6.6
Median nTPM: 15.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 40.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 35.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 33.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 33.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 31.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 31.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 29.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 29.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 28.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 28.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 27.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 12.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.1
FF:10169-103B7 60 years, female 14.5
FF:10153-102I9 76 years, female 9.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 13.1
Pig sample Sample description nTPM
Subiculum
nTPM: 11.8
Samples: 4

Max nTPM: 16.0
Min nTPM: 8.0
Sample A Female 16.0
Sample B Female 8.0
Sample C Male 12.5
Sample D Male 10.6
Dorsal hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 15.2
Min nTPM: 10.3
Sample A Female 15.2
Sample B Female 10.3
Sample C Male 15.1
Sample D Male 11.9
Entorhinal cortex
nTPM: 12.8
Samples: 4

Max nTPM: 15.9
Min nTPM: 10.3
Sample A Female 12.5
Sample B Female 10.3
Sample C Male 15.9
Sample D Male 12.4
Ventral hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 17.1
Min nTPM: 6.6
Sample A Female 12.9
Sample B Female 6.6
Sample C Male 17.1
Sample D Male 12.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 21.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.3
Samples: 4

Max nTPM: 22.3
Min nTPM: 19.1
Sample A Male 19.1
Sample B Male 20.2
Sample C Female 19.4
Sample D Female 22.3
Hippocampal formation
nTPM: 21.3
Samples: 4

Max nTPM: 25.0
Min nTPM: 18.1
Sample A Male 25.0
Sample B Male 18.1
Sample C Female 21.4
Sample D Female 20.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71574516 Antisense, RP_050915_03_H02, Mouse strain C57BL/6J (56 days, male) 0.1

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