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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FBXO7 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
56.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
208.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
195.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
186.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
156.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
156.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
129.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
126.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
126.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
118.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
118.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
116.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
115.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
113.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
110.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
109.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
108.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
107.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
107.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
106.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
106.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
103.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
101.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
100.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
99.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
99.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
99.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
98.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
97.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
97.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
96.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
96.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
96.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
96.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
95.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
94.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
94.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
93.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
93.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
91.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
90.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
89.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
89.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
89.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
88.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
88.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
88.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
86.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
85.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
85.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
84.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
83.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
83.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
83.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
81.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
81.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
80.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
80.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
79.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
79.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
79.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
79.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
79.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
78.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
78.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
77.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
77.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
77.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
76.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
76.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
75.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
75.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
75.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
75.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
75.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
75.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
75.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
75.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
74.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
74.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
74.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
74.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
74.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
73.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
73.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
73.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
73.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
73.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
72.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
71.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
70.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
70.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
69.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
69.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
68.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
67.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
67.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
67.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
67.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
67.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
66.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
66.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
65.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
65.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
65.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
65.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
64.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
64.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
64.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
64.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
63.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
63.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
63.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
63.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
63.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
63.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
62.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
62.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
62.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
62.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
62.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
62.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
62.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
61.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
61.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
61.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
61.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
61.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
61.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
60.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
60.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
59.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
59.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
59.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
59.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
59.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
59.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
59.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
58.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
58.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
58.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
58.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
58.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
58.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
58.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
57.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
57.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
57.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
57.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
57.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
56.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
56.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
56.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
56.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
56.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
56.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
56.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
55.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
55.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
55.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
55.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
55.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
54.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
54.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
54.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
54.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
54.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
53.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
53.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
53.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
53.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
53.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
53.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
53.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
53.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
52.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
52.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
52.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
52.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
51.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
51.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
51.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
51.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
51.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
51.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
51.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
51.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
51.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
51.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
51.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
51.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
50.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
50.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
50.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
50.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
50.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
50.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
50.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
50.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
49.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
49.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
49.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
49.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
49.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
49.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
49.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
49.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
49.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
48.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
48.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
48.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
48.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
48.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
48.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
48.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
48.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
48.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
47.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
47.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
47.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
47.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
47.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
46.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
46.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
46.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
46.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
46.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
45.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
45.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
45.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
45.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
44.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
44.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
44.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
44.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
44.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
44.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
44.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
44.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
43.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
43.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
43.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
43.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
43.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
43.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
43.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
42.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
42.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
42.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
42.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
41.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
41.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
41.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
41.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
41.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
41.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
41.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
41.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
41.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
41.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
40.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
40.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
40.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
40.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
40.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
40.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
40.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
39.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
39.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
39.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
39.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
38.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
38.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
38.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
38.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
38.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
38.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
37.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
37.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
37.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
37.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
37.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
36.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
36.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
36.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
35.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
35.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
35.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
35.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
35.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
35.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
34.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
34.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
34.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
34.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
33.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
33.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
33.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
33.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
32.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
32.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
32.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
32.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
32.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
32.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
32.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
32.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
31.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
31.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
31.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
31.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
31.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
30.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
29.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
29.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
29.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
29.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
29.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
29.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
28.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
28.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
28.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
27.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
27.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
27.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
27.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
27.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
26.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
26.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
26.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
26.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
26.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
26.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
26.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
25.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
25.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
24.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
24.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
24.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
23.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
23.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
22.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
22.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
21.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
21.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
21.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
21.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
20.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
19.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
19.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
18.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
18.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
17.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
17.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
15.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
14.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
14.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
13.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
13.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
13.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
13.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
12.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FBXO7 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
73.5
Number of samples
231
Samples
Sample
Description
TPM
DO45201
0 years, male, NA, stage:1, alive, 900 days
210.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
202.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
164.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
158.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
152.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
152.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
148.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
147.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
142.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
139.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
134.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
128.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
124.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
121.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
117.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
117.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
114.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
112.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
111.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
109.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
108.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
108.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
108.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
106.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
104.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
104.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
104.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
104.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
104.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
103.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
103.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
102.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
101.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
101.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
100.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
99.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
99.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
98.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
98.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
97.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
95.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
94.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
94.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
94.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
94.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
93.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
93.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
92.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
92.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
92.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
92.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
90.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
89.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
88.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
88.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
88.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
88.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
87.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
87.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
87.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
86.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
85.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
85.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
85.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
85.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
84.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
84.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
84.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
84.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
84.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
83.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
83.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
83.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
83.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
83.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
81.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
79.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
79.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
78.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
78.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
78.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
78.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
77.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
77.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
76.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
75.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
75.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
75.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
75.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
75.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
75.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
75.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
75.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
74.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
74.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
73.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
73.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
73.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
72.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
72.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
72.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
71.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
71.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
71.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
70.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
70.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
70.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
70.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
70.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
69.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
69.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
68.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
68.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
68.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
67.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
67.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
67.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
67.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
67.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
67.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
66.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
66.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
66.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
65.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
65.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
65.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
65.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
65.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
64.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
64.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
63.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
63.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
62.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
62.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
62.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
62.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
62.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
62.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
61.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
61.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
61.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
60.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
60.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
60.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
60.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
59.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
59.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
59.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
59.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
59.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
58.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
58.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
58.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
58.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
58.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
57.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
57.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
57.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
57.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
56.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
56.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
56.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
56.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
56.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
56.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
56.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
55.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
55.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
54.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
54.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
54.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
54.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
54.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
54.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
54.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
53.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
53.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
53.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
53.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
52.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
51.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
51.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
51.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
51.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
50.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
49.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
48.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
48.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
48.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
48.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
48.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
47.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
46.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
46.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
46.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
46.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
46.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
46.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
45.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
45.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
45.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
44.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
44.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
43.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
43.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
43.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
43.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
43.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
42.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
41.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
41.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
40.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
40.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
40.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
40.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
39.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
39.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
39.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
39.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
38.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
38.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
38.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
37.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
37.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
36.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
35.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
34.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
33.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
31.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
30.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
25.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
877
Tumor
1.4
863
Tumor
1.2
192
Normal
1.1
815
Tumor
0.9
391
Tumor
0.8
1027
Tumor
0.8
186
Normal
0.7
271
Tumor
0.6
217
Tumor
0.6
221
Tumor
0.5
147
Tumor
0.5
671
Tumor
0.5
884
Normal
0.5
498
Normal
0.5
331
Tumor
0.5
188
Normal
0.5
272
Normal
0.5
635
Tumor
0.5
185
Tumor
0.5
328
Normal
0.5
816
Normal
0.5
517
Tumor
0.5
818
Normal
0.5
722
Normal
0.4
464
Normal
0.4
445
Tumor
0.4
132
Normal
0.4
341
Tumor
0.4
755
Tumor
0.4
112
Tumor
0.4
162
Normal
0.4
366
Normal
0.4
213
Tumor
0.4
685
Tumor
0.4
262
Normal
0.4
964
Normal
0.4
172
Normal
0.4
368
Normal
0.4
268
Normal
0.4
114
Normal
0.4
353
Tumor
0.4
627
Tumor
0.4
956
Normal
0.4
665
Tumor
0.3
456
Normal
0.3
452
Normal
0.3
314
Normal
0.3
146
Normal
0.3
351
Tumor
0.3
617
Tumor
0.3
416
Normal
0.3
127
Tumor
0.3
388
Normal
0.3
641
Tumor
0.3
648
Normal
0.3
258
Normal
0.3
723
Tumor
0.3
148
Normal
0.3
414
Normal
0.3
362
Normal
0.3
214
Normal
0.3
426
Normal
0.3
138
Normal
0.3
136
Normal
0.3
342
Normal
0.3
358
Normal
0.3
642
Normal
0.3
354
Normal
0.2
873
Tumor
0.2
384
Normal
0.2
616
Normal
0.2
222
Normal
0.2
618
Normal
0.2
313
Tumor
0.2
628
Normal
0.2
386
Normal
0.2
494
Normal
0.2
228
Normal
0.2
568
Normal
0.2
142
Normal
0.2
513
Tumor
0.2
433
Tumor
0.2
672
Normal
0.2
277
Tumor
0.2
571
Tumor
0.2
574
Normal
0.2
967
Tumor
0.2
327
Tumor
0.2
424
Normal
0.2
113
Tumor
0.2
965
Tumor
0.2
187
Tumor
0.2
721
Tumor
0.2
666
Normal
0.2
428
Normal
0.2
365
Tumor
0.2
126
Normal
0.2
662
Normal
0.2
744
Normal
0.2
636
Normal
0.2
925
Tumor
0.2
1042
Normal
0.2
224
Normal
0.2
472
Normal
0.2
434
Normal
0.2
756
Normal
0.2
396
Normal
0.2
344
Normal
0.2
664
Normal
0.2
468
Normal
0.2
278
Normal
0.2
423
Tumor
0.2
1041
Tumor
0.1
392
Normal
0.1
1016
Normal
0.1
443
Tumor
0.1
128
Normal
0.1
697
Tumor
0.1
1046
Normal
0.1
567
Tumor
0.1
466
Normal
0.1
663
Tumor
0.1
332
Normal
0.1
1045
Tumor
0.1
914
Normal
0.1
536
Normal
0.1
432
Normal
0.1
558
Normal
0.1
698
Normal
0.1
615
Tumor
0.1
488
Normal
0.1
312
Normal
0.1
285
Tumor
0.1
686
Normal
0.1
851
Tumor
0.1
982
Normal
0.1
724
Normal
0.1
824
Normal
0.1
912
Normal
0.1
124
Normal
0.1
422
Normal
0.1
878
Normal
0.1
223
Tumor
0.1
463
Tumor
0.1
564
Normal
0.1
232
Normal
0.1
352
Normal
0.1
356
Normal
0.1
911
Tumor
0.1
874
Normal
0.1
413
Tumor
0.1
858
Normal
0.1
283
Tumor
0.1
364
Normal
0.1
367
Tumor
0.1
867
Tumor
0.1
1022
Normal
0.1
387
Tumor
0.1
924
Normal
0.1
394
Normal
0.1
1031
Tumor
0.1
913
Tumor
0.1
465
Tumor
0.1
448
Normal
0.1
882
Normal
0.1
111
Normal
0.1
862
Normal
0.1
1044
Normal
0.1
1028
Normal
0.1
196
Normal
0.1
357
Tumor
0.0
446
Normal
0.0
261
Tumor
0.0
284
Normal
0.0
716
Normal
0.0
526
Normal
0.0
363
Tumor
0.0
746
Normal
0.0
212
Normal
0.0
696
Normal
0.0
953
Tumor
0.0
218
Normal
0.0
743
Tumor
0.0
171
Tumor
0.0
421
Tumor
0.0
231
Tumor
0.0
436
Normal
0.0
864
Normal
0.0
376
Normal
0.0
955
Tumor
0.0
131
Tumor
0.0
984
Normal
0.0
1026
Normal
0.0
141
Tumor
0.0
777
Tumor
0.0
257
Tumor
0.0
267
Tumor
0.0
713
Tumor
0.0
745
Tumor
0.0
661
Tumor
0.0
857
Tumor
0.0
966
Normal
0.0
785
Tumor
0.0
714
Normal
0.0
286
Normal
0.0
814
Normal
0.0
647
Tumor
0.0
868
Normal
0.0
983
Tumor
0.0
483
Tumor
0.0
195
Tumor
0.0
514
Normal
0.0
546
Normal
0.0
778
Normal
0.0
852
Normal
0.0
1021
Tumor
-0.1
538
Normal
-0.1
938
Normal
-0.1
883
Tumor
-0.1
823
Tumor
-0.1
786
Normal
-0.1
926
Normal
-0.1
298
Normal
-0.1
484
Normal
-0.1
482
Normal
-0.1
1043
Tumor
-0.1
474
Normal
-0.1
954
Normal
-0.1
135
Tumor
-0.1
1014
Normal
-0.1
477
Tumor
-0.1
478
Normal
-0.1
444
Normal
-0.1
563
Tumor
-0.1
695
Tumor
-0.1
471
Tumor
-0.1
412
Normal
-0.1
462
Normal
-0.1
944
Normal
-0.1
534
Normal
-0.1
123
Tumor
-0.1
515
Tumor
-0.1
865
Tumor
-0.1
447
Tumor
-0.1
737
Tumor
-0.1
1032
Normal
-0.1
817
Tumor
-0.1
425
Tumor
-0.1
922
Normal
-0.1
968
Normal
-0.1
958
Normal
-0.1
963
Tumor
-0.1
727
Tumor
-0.1
361
Tumor
-0.1
978
Normal
-0.1
742
Normal
-0.1
415
Tumor
-0.1
918
Normal
-0.2
455
Tumor
-0.2
493
Tumor
-0.2
311
Tumor
-0.2
728
Normal
-0.2
866
Normal
-0.2
937
Tumor
-0.2
518
Normal
-0.2
981
Tumor
-0.2
1015
Tumor
-0.2
528
Normal
-0.2
451
Tumor
-0.2
951
Tumor
-0.2
343
Tumor
-0.2
492
Normal
-0.2
738
Normal
-0.2
487
Tumor
-0.2
976
Normal
-0.2
481
Tumor
-0.2
572
Normal
-0.2
227
Tumor
-0.2
191
Tumor
-0.2
573
Tumor
-0.2
952
Normal
-0.2
975
Tumor
-0.2
516
Normal
-0.2
427
Tumor
-0.2
861
Tumor
-0.2
385
Tumor
-0.2
915
Tumor
-0.2
137
Tumor
-0.2
557
Tumor
-0.3
395
Tumor
-0.3
553
Tumor
-0.3
161
Tumor
-0.3
741
Tumor
-0.3
461
Tumor
-0.3
145
Tumor
-0.3
393
Tumor
-0.3
921
Tumor
-0.3
881
Tumor
-0.3
435
Tumor
-0.3
715
Tumor
-0.3
535
Tumor
-0.3
297
Tumor
-0.3
977
Tumor
-0.3
537
Tumor
-0.3
431
Tumor
-0.3
467
Tumor
-0.3
813
Tumor
-0.3
524
Normal
-0.4
383
Tumor
-0.4
411
Tumor
-0.4
943
Tumor
-0.4
916
Normal
-0.4
923
Tumor
-0.4
125
Tumor
-0.4
375
Tumor
-0.4
497
Tumor
-0.4
523
Tumor
-0.4
473
Tumor
-0.4
491
Tumor
-0.4
211
Tumor
-0.5
1025
Tumor
-0.5
554
Normal
-0.5
355
Tumor
-0.5
917
Tumor
-0.6
527
Tumor
-0.6
525
Tumor
-0.7
957
Tumor
-0.7
1013
Tumor
-0.7
533
Tumor
-0.8
545
Tumor
-0.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
