HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:64.3 nTPM
HPA Brain:57.1 nTPM
GTEx:64.3 nTPM
FANTOM5:67.1 Scaled Tags Per Million
Pig:26.8 nTPM
Mouse:24.2 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA032114Antibody HPA057352Antibody CAB034296
Glial cells LowLowNot detected
Neuronal cells MediumNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 57.1
Sample id Sample description nTPM
Hippocampus
nTPM: 54.3
2529 Female, age 94, left hemisphere 60.1
1911 Female, age 85, right hemisphere 55.9
1898 Male, age 80, left hemisphere 55.5
1855 Male, age 76, left hemisphere 53.4
2621 Female, age 67, right hemisphere 53.1
2148 Female, age 91, left hemisphere 47.8
Dentate gyrus
nTPM: 51.9
2530 Female, age 94, left hemisphere 61.6
2010 Male, age 76, both hemispheres 57.3
2528 Male, age 74, both hemispheres 51.1
2246 Female, age 85, both hemispheres 49.4
2531 Female, age 67, both hemispheres 48.6
1927 Female, age 91, both hemispheres 43.4
Entorhinal gyrus
nTPM: 48.2
2117 Female, age 91, right hemisphere 55.1
2686 Male, age 75, right hemisphere 49.8
2764 Male, age 80, right hemisphere 48.4
1787 Male, age 76, left hemisphere 45.9
1938 Female, age 85, left hemisphere 45.4
2613 Female, age 94, left hemisphere 44.8
Hippocampus, CA1
nTPM: 48.3
2749 Male, age 80, left hemisphere 55.8
1873 Female, age 85, both hemispheres 51.0
2527 Male, age 74, both hemispheres 49.5
2082 Female, age 91, right hemisphere 44.0
2045 Male, age 76, both hemispheres 41.1
Hippocampus, CA2
nTPM: 51.4
1963 Male, age 80, left hemisphere 59.5
2249 Male, age 74, both hemispheres 51.9
1892 Male, age 76, both hemispheres 51.8
2437 Female, age 94, left hemisphere 50.8
2113 Female, age 91, right hemisphere 47.9
1940 Female, age 85, left hemisphere 46.6
Hippocampus, CA3
nTPM: 50.3
1891 Female, age 85, both hemispheres 58.4
1867 Male, age 76, both hemispheres 52.0
2436 Male, age 74, both hemispheres 48.7
2137 Male, age 80, left hemisphere 48.5
2620 Female, age 94, left hemisphere 47.7
2861 Female, age 67, both hemispheres 46.5
Parahippocampal cortex
nTPM: 45.5
2532 Female, age 72, left hemisphere 50.7
1850 Male, age 80, both hemispheres 50.2
2018 Male, age 76, both hemispheres 49.9
2692 Male, age 74, both hemispheres 49.6
1933 Female, age 85, both hemispheres 45.4
2245 Female, age 91, both hemispheres 45.1
1990 Female, age 91, right hemisphere 42.6
2693 Female, age 94, both hemispheres 42.2
2250 Female, age 67, right hemisphere 39.9
2622 Female, age 67, right hemisphere 39.3
Perirhinal gyrus
nTPM: 41.0
1841 Female, age 85, right hemisphere 43.4
1794 Male, age 80, right hemisphere 42.5
1847 Female, age 91, left hemisphere 41.4
2521 Female, age 94, right hemisphere 39.6
2848 Male, age 76, right hemisphere 38.2
Subiculum
nTPM: 57.1
2042 Male, age 76, both hemispheres 66.8
1977 Female, age 85, both hemispheres 59.4
1901 Male, age 80, both hemispheres 59.1
2438 Female, age 94, left hemisphere 58.9
2619 Male, age 74, both hemispheres 49.5
2729 Female, age 91, right hemisphere 48.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 64.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 64.3
Samples: 197

Max nTPM: 147.0
Min nTPM: 27.3
Std nTPM: 19.0
Median nTPM: 60.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 147.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 123.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 116.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 116.4
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 115.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 113.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 111.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 101.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 100.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 100.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 100.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 67.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.1
FF:10169-103B7 60 years, female 70.6
FF:10153-102I9 76 years, female 63.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 26.8
Pig sample Sample description nTPM
Subiculum
nTPM: 26.8
Samples: 4

Max nTPM: 30.7
Min nTPM: 24.3
Sample A Female 30.7
Sample B Female 24.3
Sample C Male 26.1
Sample D Male 26.2
Dorsal hippocampus
nTPM: 24.9
Samples: 4

Max nTPM: 28.7
Min nTPM: 20.2
Sample A Female 28.7
Sample B Female 23.3
Sample C Male 27.5
Sample D Male 20.2
Entorhinal cortex
nTPM: 25.1
Samples: 4

Max nTPM: 26.6
Min nTPM: 23.7
Sample A Female 26.6
Sample B Female 25.5
Sample C Male 24.7
Sample D Male 23.7
Ventral hippocampus
nTPM: 26.6
Samples: 4

Max nTPM: 32.7
Min nTPM: 20.6
Sample A Female 27.0
Sample B Female 20.6
Sample C Male 32.7
Sample D Male 26.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 24.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.3
Samples: 4

Max nTPM: 23.8
Min nTPM: 21.1
Sample A Male 23.8
Sample B Male 21.1
Sample C Female 22.1
Sample D Female 22.2
Hippocampal formation
nTPM: 24.2
Samples: 4

Max nTPM: 24.8
Min nTPM: 23.4
Sample A Male 24.7
Sample B Male 23.4
Sample C Female 24.8
Sample D Female 23.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
70717351 Antisense, RP_050727_02_B01, Mouse strain C57BL/6J (56 days, male) 0.8

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