HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:76.5 nTPM
HPA Brain:73.4 nTPM
GTEx:76.5 nTPM
FANTOM5:151.2 Scaled Tags Per Million
Pig:145.8 nTPM
Mouse:59.8 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000827Antibody CAB009882
Glial cells MediumNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 73.4
Sample id Sample description nTPM
Hippocampus
nTPM: 59.3
1911 Female, age 85, right hemisphere 65.6
2529 Female, age 94, left hemisphere 64.0
1898 Male, age 80, left hemisphere 62.0
2621 Female, age 67, right hemisphere 57.6
2148 Female, age 91, left hemisphere 53.5
1855 Male, age 76, left hemisphere 53.4
Dentate gyrus
nTPM: 56.1
2530 Female, age 94, left hemisphere 67.5
2531 Female, age 67, both hemispheres 58.4
2246 Female, age 85, both hemispheres 58.3
2010 Male, age 76, both hemispheres 52.3
2528 Male, age 74, both hemispheres 51.6
1927 Female, age 91, both hemispheres 48.8
Entorhinal gyrus
nTPM: 60.5
2764 Male, age 80, right hemisphere 74.9
2117 Female, age 91, right hemisphere 69.3
2686 Male, age 75, right hemisphere 63.6
1787 Male, age 76, left hemisphere 54.3
2613 Female, age 94, left hemisphere 53.4
1938 Female, age 85, left hemisphere 47.3
Hippocampus, CA1
nTPM: 57.3
2749 Male, age 80, left hemisphere 72.3
2527 Male, age 74, both hemispheres 58.3
1873 Female, age 85, both hemispheres 57.1
2082 Female, age 91, right hemisphere 55.7
2045 Male, age 76, both hemispheres 43.0
Hippocampus, CA2
nTPM: 55.4
1963 Male, age 80, left hemisphere 64.0
2113 Female, age 91, right hemisphere 61.5
2437 Female, age 94, left hemisphere 59.6
2249 Male, age 74, both hemispheres 52.3
1940 Female, age 85, left hemisphere 51.1
1892 Male, age 76, both hemispheres 43.9
Hippocampus, CA3
nTPM: 59.2
2137 Male, age 80, left hemisphere 77.2
1891 Female, age 85, both hemispheres 75.6
2620 Female, age 94, left hemisphere 72.1
2436 Male, age 74, both hemispheres 46.1
1867 Male, age 76, both hemispheres 45.1
2861 Female, age 67, both hemispheres 39.1
Parahippocampal cortex
nTPM: 54.7
2692 Male, age 74, both hemispheres 73.6
2532 Female, age 72, left hemisphere 61.6
1990 Female, age 91, right hemisphere 61.1
1850 Male, age 80, both hemispheres 60.0
2245 Female, age 91, both hemispheres 59.6
1933 Female, age 85, both hemispheres 52.2
2018 Male, age 76, both hemispheres 51.6
2693 Female, age 94, both hemispheres 44.7
2622 Female, age 67, right hemisphere 42.0
2250 Female, age 67, right hemisphere 40.6
Perirhinal gyrus
nTPM: 47.3
1794 Male, age 80, right hemisphere 52.8
1847 Female, age 91, left hemisphere 50.3
2521 Female, age 94, right hemisphere 48.1
2848 Male, age 76, right hemisphere 47.5
1841 Female, age 85, right hemisphere 37.7
Subiculum
nTPM: 73.4
2042 Male, age 76, both hemispheres 99.0
1901 Male, age 80, both hemispheres 89.7
2438 Female, age 94, left hemisphere 74.5
2619 Male, age 74, both hemispheres 71.1
1977 Female, age 85, both hemispheres 55.5
2729 Female, age 91, right hemisphere 50.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 76.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.5
Samples: 197

Max nTPM: 150.6
Min nTPM: 32.8
Std nTPM: 18.1
Median nTPM: 74.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 150.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 140.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 120.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 120.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 119.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 116.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 113.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 110.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 110.6
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 106.2
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 105.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 151.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 151.2
FF:10169-103B7 60 years, female 151.6
FF:10153-102I9 76 years, female 150.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 145.8
Pig sample Sample description nTPM
Subiculum
nTPM: 109.8
Samples: 4

Max nTPM: 153.7
Min nTPM: 90.1
Sample A Female 153.7
Sample B Female 100.2
Sample C Male 90.1
Sample D Male 95.3
Dorsal hippocampus
nTPM: 145.8
Samples: 4

Max nTPM: 207.5
Min nTPM: 100.5
Sample A Female 207.5
Sample B Female 119.2
Sample C Male 155.9
Sample D Male 100.5
Entorhinal cortex
nTPM: 104.1
Samples: 4

Max nTPM: 116.6
Min nTPM: 76.6
Sample A Female 114.3
Sample B Female 116.6
Sample C Male 108.9
Sample D Male 76.6
Ventral hippocampus
nTPM: 125.4
Samples: 4

Max nTPM: 145.3
Min nTPM: 90.7
Sample A Female 145.3
Sample B Female 90.7
Sample C Male 144.2
Sample D Male 121.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 59.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.1
Samples: 4

Max nTPM: 60.7
Min nTPM: 48.6
Sample A Male 48.6
Sample B Male 60.7
Sample C Female 53.5
Sample D Female 49.4
Hippocampal formation
nTPM: 59.8
Samples: 4

Max nTPM: 66.8
Min nTPM: 52.3
Sample A Male 61.4
Sample B Male 52.3
Sample C Female 58.7
Sample D Female 66.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
75861880 Antisense, RP_060601_03_B10, Mouse strain C57BL/6J (56 days, male) 1.4

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