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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
31.8
nTPM
HPA Brain:
48.6
nTPM
GTEx:
31.8
nTPM
FANTOM5:
46.0
Scaled Tags Per Million
Pig:
18.4
nTPM
Mouse:
6.7
nTPM
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
48.6
Sample id
Sample description
nTPM
Amygdala nTPM: 43.1
2695
Female, age 67, right hemisphere
51.4
2814
Male, age 76, right hemisphere
46.5
2514
Male, age 75, right hemisphere
44.2
2517
Female, age 94, left hemisphere
40.5
1987
Female, age 91, left hemisphere
33.1
Basal amygdala nTPM: 46.4
2827
Female, age 67, right hemisphere
65.2
2685
Female, age 94, left hemisphere
49.6
1955
Male, age 76, both hemispheres
48.3
2110
Male, age 80, left hemisphere
41.9
2609
Male, age 75, right hemisphere
39.4
2243
Female, age 91, right hemisphere
33.7
Central amygdala nTPM: 40.8
1905
Male, age 76, both hemispheres
47.6
2826
Female, age 94, left hemisphere
47.0
2701
Female, age 91, right hemisphere
39.7
2239
Male, age 80, left hemisphere
37.0
2515
Male, age 75, right hemisphere
32.7
Corticomedial amygdala nTPM: 41.0
2535
Female, age 67, right hemisphere
58.6
2240
Male, age 76, both hemispheres
45.8
2429
Female, age 94, left hemisphere
43.2
2428
Male, age 75, right hemisphere
40.5
2829
Male, age 80, left hemisphere
29.6
2242
Female, age 91, right hemisphere
28.0
Lateral amygdala nTPM: 48.6
2830
Female, age 67, right hemisphere
67.0
2256
Male, age 80, left hemisphere
50.8
2534
Female, age 94, left hemisphere
46.1
1883
Male, age 76, both hemispheres
43.7
2255
Female, age 91, right hemisphere
42.5
2516
Male, age 75, right hemisphere
41.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
31.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 31.8
Samples: 152
Max nTPM: 67.7
Min nTPM: 6.6
Std nTPM: 12.1
Median nTPM: 30.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
67.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
65.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
64.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
61.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
60.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
58.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
57.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
52.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
51.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
49.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
49.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
48.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
47.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
47.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
47.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
46.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
46.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
46.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
45.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
45.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
45.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
45.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
44.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
44.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
43.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
43.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
43.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
43.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
43.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
43.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
42.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
42.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
42.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
41.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
40.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
40.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
40.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
39.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
39.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
39.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
39.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
38.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
37.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
37.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
37.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
37.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
37.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
36.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
35.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
35.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
35.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
35.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
35.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
35.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
35.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
35.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
34.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
34.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
34.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
34.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
34.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
34.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
33.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
33.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
33.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
33.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
33.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
32.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
32.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
32.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
31.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
31.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
31.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
30.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
30.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
30.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
30.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
29.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
29.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
29.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
29.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
29.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
29.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
29.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
28.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
28.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
28.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
28.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
28.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
27.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
27.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
27.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
27.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
27.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
26.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
26.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
26.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
26.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
26.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
26.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
25.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
25.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
25.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
25.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
24.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
24.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
24.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
24.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
23.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
23.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
23.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
23.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
23.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
22.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
22.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
22.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
22.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
22.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
22.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
22.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
21.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
21.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
21.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
20.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
20.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
20.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
19.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
19.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
19.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
19.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
18.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
18.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
18.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
18.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
18.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
17.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
17.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
17.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
17.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
16.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
16.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
16.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
15.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
15.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
14.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
14.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
14.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
12.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
8.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
8.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
6.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
6.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.