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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAST3 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
18.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
17.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
15.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
15.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
14.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
14.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
13.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
12.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
12.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
12.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
12.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
11.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
11.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
11.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
11.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
11.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
11.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
11.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
10.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
10.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
10.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
10.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
10.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
10.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
9.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
9.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
9.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
9.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
9.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
9.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
9.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
9.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
9.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
9.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
9.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
8.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
8.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
8.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
8.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
8.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
8.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
8.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
8.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
8.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
8.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
8.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
8.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
8.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
8.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
8.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
8.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
8.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
8.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
8.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
8.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
8.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
8.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
8.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
7.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
7.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
7.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
7.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
7.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
7.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
7.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
7.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
7.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
7.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
7.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
7.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
7.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
7.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
7.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
7.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
7.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
7.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
7.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
7.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
7.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
7.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
7.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
7.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
7.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
7.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
7.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
7.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
7.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
6.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
6.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
6.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
6.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
6.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
6.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
6.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
6.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
6.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
6.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
6.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
6.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
6.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
6.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
6.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
6.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
6.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
6.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
6.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
6.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
6.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
6.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
6.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
6.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
6.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
6.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
6.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
6.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
6.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
6.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
6.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
5.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
5.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
5.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
5.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
5.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
5.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
5.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
5.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
5.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
5.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
5.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
5.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
5.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
5.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
5.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
5.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
5.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
5.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
5.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
5.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
5.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
5.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
5.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
5.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
5.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
5.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
5.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
5.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
5.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
5.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
5.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
5.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
5.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
5.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
5.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
5.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
5.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
5.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
5.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
5.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
5.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
5.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
5.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
5.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
5.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
5.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
5.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
5.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
5.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
5.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
5.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
4.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
4.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
4.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
4.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
4.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
4.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
4.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
4.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
4.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
4.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
4.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
4.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
4.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
4.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
4.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
4.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
4.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
4.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
4.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
4.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
4.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
4.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
4.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
4.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
4.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
4.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
4.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
4.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
4.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
4.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
4.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
4.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
4.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
4.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
4.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
4.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
4.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
4.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
4.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
4.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
4.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
4.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
4.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
3.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
3.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
3.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
3.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
3.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
3.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
3.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
3.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
3.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
3.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
3.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
3.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
3.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
3.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
3.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
3.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
3.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
3.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
3.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
3.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
3.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
3.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
3.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
3.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
3.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
3.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
3.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.2
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
3.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
3.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
3.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
3.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
3.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
3.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
3.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
3.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
3.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
3.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
3.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
3.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
3.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
2.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
2.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
2.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
2.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
2.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
2.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
2.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
2.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
2.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
2.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
2.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
2.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
2.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
2.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
2.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
2.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
2.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
2.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
2.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
2.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
2.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
2.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
2.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
2.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
2.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
2.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
2.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
2.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
2.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
2.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
2.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
2.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
2.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
2.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
2.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
1.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
1.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
1.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
1.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
1.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
1.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
1.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAST3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.8
Number of samples
231
Samples
Sample
Description
TPM
DO48725
0 years, male, NA, stage:1, alive, 780 days
56.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
53.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
31.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
30.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
24.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
22.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
22.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
21.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
21.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
21.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
20.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
19.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
18.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
16.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
16.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
15.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
15.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
15.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
15.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
15.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
15.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
14.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
14.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
14.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
14.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
13.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
13.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
12.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
12.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
11.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
11.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
11.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
11.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
11.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
11.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
11.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
11.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
11.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
10.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
10.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
10.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
10.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
10.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
10.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
10.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
10.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
9.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
9.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
9.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
9.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
9.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
9.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
9.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
9.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
8.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
8.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
8.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
8.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
8.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
8.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
8.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
8.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
8.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
8.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
8.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
8.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
8.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
8.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
8.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
8.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
7.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
7.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
7.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
7.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
7.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
7.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
7.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
7.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
7.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
7.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
7.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
7.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
7.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
7.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
7.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
7.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
7.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
7.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
7.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
7.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
7.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
6.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
6.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
6.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
6.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
6.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
6.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
6.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
6.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
6.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
6.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
6.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
6.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
6.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
6.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
6.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
6.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
6.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
6.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
6.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
6.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
6.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
6.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
5.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
5.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
5.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
5.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
5.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
5.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
5.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
5.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
5.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
5.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
5.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
5.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
5.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
5.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
5.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
5.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
5.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
5.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
5.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
5.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
5.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
5.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
5.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
5.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
5.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
5.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
5.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
5.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
5.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
4.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
4.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
4.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
4.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
4.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
4.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
4.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
4.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
4.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
4.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
4.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
4.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
4.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
4.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
4.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
4.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
4.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
4.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
4.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
4.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
4.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
4.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
4.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
4.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
4.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
4.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
4.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
4.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
4.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
4.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
4.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
4.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
4.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
4.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
4.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
4.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
4.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
4.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
4.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
4.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
4.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
4.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
4.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
4.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
4.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
3.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
3.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
3.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
3.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
3.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
3.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
3.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
3.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
3.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
3.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
3.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
3.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
3.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
3.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
3.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
3.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
3.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
3.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
2.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
2.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
2.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
2.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
2.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
2.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
2.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
2.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
2.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
2.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
2.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
2.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
2.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
2.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
2.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
2.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
2.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
2.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
1.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
911
Tumor
1.3
131
Tumor
1.0
171
Tumor
0.7
863
Tumor
0.7
231
Tumor
0.7
724
Normal
0.6
123
Tumor
0.6
977
Tumor
0.6
851
Tumor
0.5
955
Tumor
0.5
617
Tumor
0.5
737
Tumor
0.5
221
Tumor
0.5
951
Tumor
0.5
428
Normal
0.5
615
Tumor
0.5
1013
Tumor
0.4
858
Normal
0.4
211
Tumor
0.4
785
Tumor
0.4
312
Normal
0.4
777
Tumor
0.4
956
Normal
0.4
884
Normal
0.4
147
Tumor
0.4
665
Tumor
0.4
414
Normal
0.4
755
Tumor
0.4
536
Normal
0.4
714
Normal
0.4
824
Normal
0.3
513
Tumor
0.3
571
Tumor
0.3
1021
Tumor
0.3
126
Normal
0.3
882
Normal
0.3
446
Normal
0.3
786
Normal
0.3
746
Normal
0.3
917
Tumor
0.3
277
Tumor
0.3
563
Tumor
0.3
912
Normal
0.3
514
Normal
0.3
474
Normal
0.3
952
Normal
0.3
663
Tumor
0.3
391
Tumor
0.3
661
Tumor
0.3
938
Normal
0.3
648
Normal
0.3
756
Normal
0.3
516
Normal
0.3
741
Tumor
0.3
365
Tumor
0.3
426
Normal
0.3
965
Tumor
0.3
685
Tumor
0.3
278
Normal
0.3
463
Tumor
0.2
271
Tumor
0.2
528
Normal
0.2
515
Tumor
0.2
978
Normal
0.2
422
Normal
0.2
436
Normal
0.2
125
Tumor
0.2
424
Normal
0.2
356
Normal
0.2
518
Normal
0.2
963
Tumor
0.2
716
Normal
0.2
494
Normal
0.2
212
Normal
0.2
738
Normal
0.2
493
Tumor
0.2
472
Normal
0.2
484
Normal
0.2
492
Normal
0.2
284
Normal
0.2
431
Tumor
0.2
285
Tumor
0.2
943
Tumor
0.2
364
Normal
0.2
778
Normal
0.2
966
Normal
0.2
742
Normal
0.2
664
Normal
0.2
1043
Tumor
0.2
478
Normal
0.2
878
Normal
0.2
982
Normal
0.2
728
Normal
0.2
574
Normal
0.2
311
Tumor
0.2
435
Tumor
0.2
958
Normal
0.2
384
Normal
0.2
616
Normal
0.2
387
Tumor
0.2
224
Normal
0.2
976
Normal
0.2
328
Normal
0.1
852
Normal
0.1
415
Tumor
0.1
944
Normal
0.1
881
Tumor
0.1
534
Normal
0.1
498
Normal
0.1
964
Normal
0.1
298
Normal
0.1
222
Normal
0.1
727
Tumor
0.1
816
Normal
0.1
223
Tumor
0.1
432
Normal
0.1
112
Tumor
0.1
313
Tumor
0.1
113
Tumor
0.1
1042
Normal
0.1
666
Normal
0.1
572
Normal
0.1
452
Normal
0.1
524
Normal
0.1
861
Tumor
0.1
314
Normal
0.1
618
Normal
0.1
868
Normal
0.1
564
Normal
0.1
434
Normal
0.1
161
Tumor
0.1
554
Normal
0.1
394
Normal
0.1
416
Normal
0.1
262
Normal
0.1
1016
Normal
0.1
1044
Normal
0.1
696
Normal
0.1
698
Normal
0.1
568
Normal
0.1
111
Normal
0.1
1046
Normal
0.1
425
Tumor
0.1
462
Normal
0.1
488
Normal
0.1
983
Tumor
0.1
366
Normal
0.1
141
Tumor
0.1
662
Normal
0.1
148
Normal
0.1
456
Normal
0.1
383
Tumor
0.1
467
Tumor
0.1
172
Normal
0.1
473
Tumor
0.1
286
Normal
0.1
558
Normal
0.1
386
Normal
0.1
412
Normal
0.1
1045
Tumor
0.1
723
Tumor
0.1
214
Normal
0.1
862
Normal
0.1
635
Tumor
0.1
471
Tumor
0.1
114
Normal
0.1
567
Tumor
0.1
228
Normal
0.1
866
Normal
0.1
818
Normal
0.1
128
Normal
0.1
376
Normal
0.1
918
Normal
0.1
363
Tumor
0.0
1026
Normal
0.0
874
Normal
0.0
124
Normal
0.0
722
Normal
0.0
546
Normal
0.0
814
Normal
0.0
954
Normal
0.0
864
Normal
0.0
466
Normal
0.0
191
Tumor
0.0
957
Tumor
0.0
423
Tumor
0.0
481
Tumor
0.0
162
Normal
0.0
195
Tumor
0.0
188
Normal
0.0
217
Tumor
0.0
477
Tumor
0.0
272
Normal
0.0
628
Normal
0.0
523
Tumor
0.0
526
Normal
0.0
553
Tumor
0.0
926
Normal
0.0
916
Normal
0.0
721
Tumor
0.0
396
Normal
0.0
697
Tumor
0.0
482
Normal
0.0
468
Normal
0.0
332
Normal
0.0
914
Normal
0.0
968
Normal
0.0
268
Normal
0.0
362
Normal
0.0
451
Tumor
0.0
447
Tumor
0.0
448
Normal
0.0
146
Normal
0.0
535
Tumor
0.0
1014
Normal
0.0
915
Tumor
0.0
136
Normal
0.0
1032
Normal
0.0
267
Tumor
0.0
813
Tumor
0.0
464
Normal
0.0
627
Tumor
0.0
1028
Normal
0.0
857
Tumor
0.0
1015
Tumor
0.0
497
Tumor
0.0
984
Normal
0.0
1027
Tumor
0.0
537
Tumor
0.0
713
Tumor
0.0
483
Tumor
-0.1
218
Normal
-0.1
527
Tumor
-0.1
368
Normal
-0.1
937
Tumor
-0.1
127
Tumor
-0.1
745
Tumor
-0.1
461
Tumor
-0.1
744
Normal
-0.1
192
Normal
-0.1
444
Normal
-0.1
411
Tumor
-0.1
445
Tumor
-0.1
232
Normal
-0.1
922
Normal
-0.1
743
Tumor
-0.1
142
Normal
-0.1
686
Normal
-0.1
491
Tumor
-0.1
873
Tumor
-0.1
921
Tumor
-0.1
913
Tumor
-0.1
538
Normal
-0.1
557
Tumor
-0.1
573
Tumor
-0.1
393
Tumor
-0.1
297
Tumor
-0.1
392
Normal
-0.1
186
Normal
-0.1
981
Tumor
-0.1
883
Tumor
-0.1
145
Tumor
-0.1
138
Normal
-0.1
545
Tumor
-0.1
283
Tumor
-0.1
388
Normal
-0.1
375
Tumor
-0.1
327
Tumor
-0.1
196
Normal
-0.1
361
Tumor
-0.1
924
Normal
-0.1
261
Tumor
-0.1
525
Tumor
-0.1
258
Normal
-0.1
132
Normal
-0.1
355
Tumor
-0.2
1022
Normal
-0.2
421
Tumor
-0.2
465
Tumor
-0.2
331
Tumor
-0.2
257
Tumor
-0.2
817
Tumor
-0.2
815
Tumor
-0.2
865
Tumor
-0.2
187
Tumor
-0.2
967
Tumor
-0.2
385
Tumor
-0.2
672
Normal
-0.2
925
Tumor
-0.2
867
Tumor
-0.2
427
Tumor
-0.2
1025
Tumor
-0.2
647
Tumor
-0.2
413
Tumor
-0.2
354
Normal
-0.2
695
Tumor
-0.2
213
Tumor
-0.2
455
Tumor
-0.2
343
Tumor
-0.2
433
Tumor
-0.2
353
Tumor
-0.2
358
Normal
-0.3
1031
Tumor
-0.3
352
Normal
-0.3
185
Tumor
-0.3
823
Tumor
-0.3
641
Tumor
-0.3
877
Tumor
-0.3
137
Tumor
-0.3
533
Tumor
-0.3
487
Tumor
-0.3
671
Tumor
-0.3
636
Normal
-0.3
341
Tumor
-0.3
227
Tumor
-0.3
351
Tumor
-0.3
642
Normal
-0.3
975
Tumor
-0.3
715
Tumor
-0.4
443
Tumor
-0.4
395
Tumor
-0.4
1041
Tumor
-0.4
367
Tumor
-0.5
517
Tumor
-0.5
923
Tumor
-0.5
344
Normal
-0.5
342
Normal
-0.6
953
Tumor
-0.6
357
Tumor
-0.6
135
Tumor
-0.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
