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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
34.1
nTPM
HPA Brain:
196.9
nTPM
GTEx:
34.1
nTPM
FANTOM5:
159.0
Scaled Tags Per Million
Pig:
68.7
nTPM
Mouse:
78.3
nTPM
Allen mouse:
24.9
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
196.9
Sample id
Sample description
nTPM
Amygdala nTPM: 94.8
2517
Female, age 94, left hemisphere
151.3
1987
Female, age 91, left hemisphere
106.3
2514
Male, age 75, right hemisphere
92.9
2814
Male, age 76, right hemisphere
64.8
2695
Female, age 67, right hemisphere
58.4
Basal amygdala nTPM: 196.9
2685
Female, age 94, left hemisphere
266.8
2243
Female, age 91, right hemisphere
226.6
2827
Female, age 67, right hemisphere
218.6
2110
Male, age 80, left hemisphere
194.8
1955
Male, age 76, both hemispheres
144.0
2609
Male, age 75, right hemisphere
130.8
Central amygdala nTPM: 121.4
2826
Female, age 94, left hemisphere
193.9
2239
Male, age 80, left hemisphere
175.2
2701
Female, age 91, right hemisphere
102.4
2515
Male, age 75, right hemisphere
82.9
1905
Male, age 76, both hemispheres
52.6
Corticomedial amygdala nTPM: 176.7
2535
Female, age 67, right hemisphere
232.6
2829
Male, age 80, left hemisphere
225.4
2429
Female, age 94, left hemisphere
193.2
2242
Female, age 91, right hemisphere
166.5
2240
Male, age 76, both hemispheres
127.6
2428
Male, age 75, right hemisphere
114.7
Lateral amygdala nTPM: 146.1
2534
Female, age 94, left hemisphere
226.8
2256
Male, age 80, left hemisphere
200.3
2255
Female, age 91, right hemisphere
137.9
2830
Female, age 67, right hemisphere
126.7
1883
Male, age 76, both hemispheres
97.0
2516
Male, age 75, right hemisphere
87.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
34.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 34.1
Samples: 152
Max nTPM: 78.1
Min nTPM: 3.1
Std nTPM: 14.3
Median nTPM: 32.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
78.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
76.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
68.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
68.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
64.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
64.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
62.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
62.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
61.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
61.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
59.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
58.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
58.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
54.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
54.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
54.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
53.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
52.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
52.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
52.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
50.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
50.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
49.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
48.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
47.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
47.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
47.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
47.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
47.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
47.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
46.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
45.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
44.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
44.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
43.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
43.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
43.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
41.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
40.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
40.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
39.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
39.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
39.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
39.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
39.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
39.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
38.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
38.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
38.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
38.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
38.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
37.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
37.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
37.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
37.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
37.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
37.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
37.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
36.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
36.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
36.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
36.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
36.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
35.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
35.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
34.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
34.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
34.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
34.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
33.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
33.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
32.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
32.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
32.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
32.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
32.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
32.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
32.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
31.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
31.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
30.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
30.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
30.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
30.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
30.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
30.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
30.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
29.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
29.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
29.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
28.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
28.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
28.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
28.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
27.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
27.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
27.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
27.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
27.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
26.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
26.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
26.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
26.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
26.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
25.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
25.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
25.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
25.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
25.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
24.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
24.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
24.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
24.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
24.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
23.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
23.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
23.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
22.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
22.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
21.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
21.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
21.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
21.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
20.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
20.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
20.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
20.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
19.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
19.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
19.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
19.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
19.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
18.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
18.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
18.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
18.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
17.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
17.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
17.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
17.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
16.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
16.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
16.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
16.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
15.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
15.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
14.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
14.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
13.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
6.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
5.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
3.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
78.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 78.3
Samples: 4
Max nTPM: 100.4
Min nTPM: 68.1
Sample A
Male
68.1
Sample B
Male
70.9
Sample C
Female
100.4
Sample D
Female
73.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.