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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMED1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
78.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
184.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
162.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
150.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
140.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
134.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
131.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
123.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
120.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
116.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
115.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
109.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
109.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
107.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
102.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
100.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
98.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
94.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
93.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
88.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
87.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
86.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
86.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
82.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
82.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
81.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
77.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
75.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
74.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
72.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
71.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
71.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
70.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
69.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
68.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
67.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
67.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
66.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
66.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
65.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
63.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
61.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
61.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
60.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
59.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
58.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
57.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
57.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
56.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
56.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
55.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
53.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
51.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
50.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
46.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
44.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
44.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
44.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
42.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
40.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
37.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
33.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
32.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
29.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMED1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
98.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
83.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
81.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
78.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
75.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
73.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
72.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
71.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
69.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
69.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
67.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
67.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
67.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
66.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
65.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
65.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
65.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
64.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
64.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
63.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
63.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
63.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
62.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
62.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
62.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
62.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
61.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
61.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
60.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
60.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
59.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
58.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
58.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
57.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
57.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
57.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
57.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
57.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
56.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
56.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
56.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
56.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
56.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
55.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
55.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
54.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
54.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
53.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
53.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
53.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
53.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
53.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
53.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
52.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
52.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
52.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
52.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
51.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
51.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
51.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
51.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
51.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
51.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
51.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
51.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
51.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
50.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
50.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
50.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
50.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
50.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
50.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
50.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
50.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
49.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
49.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
49.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
49.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
49.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
49.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
49.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
49.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
49.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
49.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
49.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
48.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
48.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
48.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
48.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
48.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
48.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
48.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
48.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
48.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
48.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
48.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
48.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
48.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
48.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
47.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
47.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
47.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
47.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
47.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
47.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
47.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
47.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
47.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
47.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
47.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
46.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
46.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
46.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
46.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
46.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
46.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
46.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
46.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
46.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
46.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
46.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
46.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
46.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
46.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
45.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
45.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
45.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
45.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
45.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
45.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
45.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
45.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
45.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
45.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
45.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
45.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
45.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
45.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
44.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
44.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
44.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
44.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
44.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
44.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
44.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
44.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
44.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
44.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
44.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
44.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
44.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
43.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
43.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
43.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
43.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
43.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
43.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
43.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
43.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
43.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
43.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
43.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
43.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
43.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
43.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
43.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
43.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
43.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
43.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
43.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
43.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
43.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
43.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
43.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
43.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
42.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
42.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
42.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
42.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
42.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
42.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
42.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
42.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
42.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
42.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
42.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
42.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
42.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
42.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
42.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
42.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
42.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
42.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
42.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
42.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
42.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
41.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
41.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
41.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
41.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
41.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
41.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
41.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
41.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
41.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
41.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
41.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
41.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
41.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
41.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
41.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
41.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
41.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
41.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
41.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
40.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
40.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
40.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
40.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
40.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
40.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
40.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
40.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
40.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
40.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
40.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
40.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
40.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
40.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
40.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
39.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
39.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
39.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
39.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
39.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
39.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
39.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
39.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
39.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
39.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
39.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
39.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
39.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
38.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
38.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
38.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
38.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
38.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
38.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
38.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
38.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
38.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
38.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
38.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
38.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
37.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
37.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
37.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
37.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
37.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
37.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
37.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
37.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
37.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
37.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
37.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
37.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
37.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
37.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
37.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
37.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
37.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
37.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
36.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
36.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
36.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
36.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
36.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
36.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
36.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
36.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
36.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
36.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
36.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
36.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
36.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
36.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
36.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
35.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
35.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
35.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
35.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
35.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
35.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
35.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
35.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
35.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
35.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
35.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
35.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
35.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
35.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
35.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
35.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
35.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
35.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
35.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
35.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
35.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
35.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
34.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
34.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
34.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
34.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
34.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
34.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
34.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
34.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
34.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
34.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
33.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
33.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
33.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
33.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
33.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
33.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
33.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
33.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
33.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
33.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
33.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
33.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
33.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
33.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
33.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
33.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
32.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
32.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
32.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
32.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
32.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
32.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
32.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
32.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
32.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
32.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
32.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
32.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
32.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
32.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
32.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
32.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
32.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
32.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
32.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
32.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
32.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
32.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
32.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
31.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
31.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
31.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
31.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
31.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
31.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
31.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
31.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
31.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
31.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
31.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
31.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
31.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
31.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
31.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
31.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
31.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
30.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
30.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
30.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
30.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
30.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
30.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
30.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
30.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
30.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
30.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
30.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
30.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
30.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
30.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
30.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
30.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
30.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
29.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
29.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
29.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
29.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
29.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
29.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
29.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
29.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
29.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
29.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
29.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
29.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
29.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
29.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
29.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
28.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
28.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
28.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
28.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
28.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
28.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
28.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
28.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
28.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
28.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
28.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
27.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
27.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
27.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
27.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
27.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
27.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
27.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
27.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
27.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
27.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
26.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
26.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
26.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
26.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
26.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
26.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
26.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
26.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
26.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
26.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
25.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
25.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
25.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
25.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
25.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
25.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
25.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
24.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
24.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
24.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
24.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
24.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
24.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
24.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
24.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
24.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
23.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
23.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
23.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
23.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
23.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
23.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
23.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
23.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
23.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
23.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
23.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
23.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
23.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
23.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
22.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
22.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
22.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
22.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
22.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
22.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
22.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
21.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
21.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
21.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
21.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
21.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
20.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
20.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
20.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
20.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
19.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
19.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
19.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
19.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
18.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
18.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
18.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
18.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
17.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
17.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
17.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
17.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
17.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
16.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
16.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
16.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
16.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
14.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
14.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
14.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
13.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
13.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
11.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
5.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMED1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
79.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
59.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
58.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
56.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
56.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
53.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
53.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
51.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
51.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
50.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
50.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
49.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
49.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
47.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
47.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
47.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
47.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
46.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
45.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
45.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
44.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
44.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
44.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
44.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
44.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
43.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
43.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
43.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
43.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
42.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
42.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
42.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
41.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
41.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
41.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
40.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
40.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
40.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
39.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
37.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
37.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
36.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
36.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
36.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
36.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
36.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
35.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
35.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
35.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
34.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
34.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
34.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
34.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
34.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
34.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
34.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
34.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
34.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
34.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
33.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
33.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
33.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
33.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
33.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
33.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
32.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
32.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
32.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
31.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
31.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
31.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
30.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
30.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
30.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
30.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
30.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
30.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
30.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
30.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
29.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
29.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
28.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
28.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
27.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
27.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
27.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
26.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
26.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
26.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
26.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
25.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
23.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
22.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
22.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
21.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
21.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
20.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMED1 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
102.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
97.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
96.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
95.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
95.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
93.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
88.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
87.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
82.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
81.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
76.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
74.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
74.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
71.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
71.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
70.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
70.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
70.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
69.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
68.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
67.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
67.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
66.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
65.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
65.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
64.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
64.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
64.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
63.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
63.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
63.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
62.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
61.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
61.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
60.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
59.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
59.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
57.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
57.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
57.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
57.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
56.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
56.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
56.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
55.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
54.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
54.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
54.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
54.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
54.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
53.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
53.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
53.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
53.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
53.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
52.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
52.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
52.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
52.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
52.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
51.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
51.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
51.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
51.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
51.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
51.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
50.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
50.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
50.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
50.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
49.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
49.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
49.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
49.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
49.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
49.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
49.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
48.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
48.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
48.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
48.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
48.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
47.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
47.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
47.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
47.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
47.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
46.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
46.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
46.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
46.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
46.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
46.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
45.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
45.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
45.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
45.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
44.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
44.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
44.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
44.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
44.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
44.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
44.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
44.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
44.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
43.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
43.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
43.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
43.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
43.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
43.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
43.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
43.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
43.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
43.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
43.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
43.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
43.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
43.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
42.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
42.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
42.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
42.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
42.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
42.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
42.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
42.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
42.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
42.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
42.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
42.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
41.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
41.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
41.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
41.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
41.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
41.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
41.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
41.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
41.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
41.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
41.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
41.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
41.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
41.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
40.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
40.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
40.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
39.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
39.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
39.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
39.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
39.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
39.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
39.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
39.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
38.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
38.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
38.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
38.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
38.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
38.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
38.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
38.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
37.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
37.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
37.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
37.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
37.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
37.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
37.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
37.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
37.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
37.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
37.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
36.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
36.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
36.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
36.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
35.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
35.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
35.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
35.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
35.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
35.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
35.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
35.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
34.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
34.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
34.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
34.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
34.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
34.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
34.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
34.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
34.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
33.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
33.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
33.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
33.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
33.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
33.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
33.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
33.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
32.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
32.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
32.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
32.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
32.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
32.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
31.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
31.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
31.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
31.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
31.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
31.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
31.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
31.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
30.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
30.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
30.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
29.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
29.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
29.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
29.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
28.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
28.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
28.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
28.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
28.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
28.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
28.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
27.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
27.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
27.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
27.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
27.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
27.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
27.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
27.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
26.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
26.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
26.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
26.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
25.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
25.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
25.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
25.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
24.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
24.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
24.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
24.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
24.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
24.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
24.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
24.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
23.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
23.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
22.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
22.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
22.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
21.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
21.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
21.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
21.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
21.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
19.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
19.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
16.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
15.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
15.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
14.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
12.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
10.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
3.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088690003
Tumor
1.1
CPT0079270003
Tumor
1.1
CPT0025110003
Tumor
0.7
CPT0092290003
Tumor
0.7
CPT0078660003
Tumor
0.7
CPT0002270011
Tumor
0.6
CPT0001340003
Tumor
0.6
CPT0077110003
Tumor
0.6
CPT0009000003
Tumor
0.6
CPT0023690003
Tumor
0.5
CPT0011410003
Tumor
0.5
CPT0025580004
Tumor
0.5
CPT0015730003
Tumor
0.5
CPT0006900003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0092730003
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0023350003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0019130003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0087040003
Tumor
0.4
CPT0023360001
Normal
0.4
CPT0001500009
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0001220008
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0010170001
Normal
0.3
CPT0014160003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0026420001
Normal
0.3
CPT0079380003
Tumor
0.3
CPT0063320003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0088550004
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0006730001
Normal
0.2
CPT0012550003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0078990003
Tumor
0.2
CPT0088920001
Normal
0.2
CPT0066470004
Tumor
0.2
CPT0088780001
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0079180003
Tumor
0.1
CPT0012180003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0012370003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0013790003
Normal
0.0
CPT0000790001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0088640003
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0000660001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0015810003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0069160003
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0077140001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0001350001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0012900004
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0077500001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0092790003
Tumor
-0.2
CPT0086890003
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0085670003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0020120003
Tumor
-0.2
CPT0079230003
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0012570003
Normal
-0.3
CPT0086870003
Tumor
-0.3
CPT0079000001
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0025880003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0017450001
Normal
-0.3
CPT0014470001
Normal
-0.4
CPT0024680001
Normal
-0.4
CPT0088970003
Tumor
-0.4
CPT0063630003
Tumor
-0.4
CPT0084560003
Tumor
-0.4
CPT0078800003
Tumor
-0.4
CPT0009080003
Normal
-0.5
CPT0079410003
Tumor
-0.5
CPT0009020003
Normal
-0.5
CPT0009060003
Tumor
-0.5
CPT0018250001
Normal
-0.6
CPT0012920003
Normal
-0.7
CPT0017410003
Tumor
-1.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
