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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HNRNPH3 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
130.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
79.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
79.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
78.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
76.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
73.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
73.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
71.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
67.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
65.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
63.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
62.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
61.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
61.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
61.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
58.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
57.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
57.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
55.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
52.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
51.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
51.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
50.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
50.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
49.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
48.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
47.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
47.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
46.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
46.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
46.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
45.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
45.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
45.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
44.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
43.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
43.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
42.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
41.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
40.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
40.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
40.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
40.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
39.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
39.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
39.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
38.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
38.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
38.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
38.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
37.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
36.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
36.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
36.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
35.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
35.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
35.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
35.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
35.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
35.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
35.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
34.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
34.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
34.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
34.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
34.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
33.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
33.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
33.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
33.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
33.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
33.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
33.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
33.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
33.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
32.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
32.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
32.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
32.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
32.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
32.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
32.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
32.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
32.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
31.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
31.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
31.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
31.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
31.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
31.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
31.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
30.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
30.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
30.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
30.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
29.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
29.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
29.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
29.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
29.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
29.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
29.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
28.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
28.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
28.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
28.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
28.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
28.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
28.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
28.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
27.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
27.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
27.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
27.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
27.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
27.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
27.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
27.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
27.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
27.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
27.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
27.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
27.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
27.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
27.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
27.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
26.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
26.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
26.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
26.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
26.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
26.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
26.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
26.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
26.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
26.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
26.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
25.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
25.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
25.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
25.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
25.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
25.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
25.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
24.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
24.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
24.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
24.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
24.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
24.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
24.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
24.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
24.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
24.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
24.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
24.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
24.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
23.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
23.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
23.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
23.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
23.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
23.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
23.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
23.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
23.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
22.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
22.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
22.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
22.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
22.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
22.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
22.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
22.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
22.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
21.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
21.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
21.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
21.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
21.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
21.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
21.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
21.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
21.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
21.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
21.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
21.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
21.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
20.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
20.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
20.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
20.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
20.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
20.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
20.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
20.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
20.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
20.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
20.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
20.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
20.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
20.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
19.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
19.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
19.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
19.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
19.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
19.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
19.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
19.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
19.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
19.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
19.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
19.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
19.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
19.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
19.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
18.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
18.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
18.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
18.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
18.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
18.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
18.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
18.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
18.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
18.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
18.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
18.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
18.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
18.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
18.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
18.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
18.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
18.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
17.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
17.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
17.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
17.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
17.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
17.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
17.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
17.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
17.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
16.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
16.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
16.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
16.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
16.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
16.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
16.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
16.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
16.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
16.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
16.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
16.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
16.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
16.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
16.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
16.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
16.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
15.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
15.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
15.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
15.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
15.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
15.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
15.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
15.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
15.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
15.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
15.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
15.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
15.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
14.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
14.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
14.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
14.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
14.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
14.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
14.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
14.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
14.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
14.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
14.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
13.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
13.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
13.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
13.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
13.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
13.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
13.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
13.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
13.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
13.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
13.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
13.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
13.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
13.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
13.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
13.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
13.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
13.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
13.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
12.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
12.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
12.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
12.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
12.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
12.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
12.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
12.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
12.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
12.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
12.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
11.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
11.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
11.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
11.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
11.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
11.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
11.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
11.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
11.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
11.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
10.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
10.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
10.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
10.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
10.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
9.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
9.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
9.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
8.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
8.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
8.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
7.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
7.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
6.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
6.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
5.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
4.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
4.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
3.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HNRNPH3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.9
Number of samples
231
Samples
Sample
Description
TPM
DO50815
0 years, male, NA, stage:3, alive, 150 days
106.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
86.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
78.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
76.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
76.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
75.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
75.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
73.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
73.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
71.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
71.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
70.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
70.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
69.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
68.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
68.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
67.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
67.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
65.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
63.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
63.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
62.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
62.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
61.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
61.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
60.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
60.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
60.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
60.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
58.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
58.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
58.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
58.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
56.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
56.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
56.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
55.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
55.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
54.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
54.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
53.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
53.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
53.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
53.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
52.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
52.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
52.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
52.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
52.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
51.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
50.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
50.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
49.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
48.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
48.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
48.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
48.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
47.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
47.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
46.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
46.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
46.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
46.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
46.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
45.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
45.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
45.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
45.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
45.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
45.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
45.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
45.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
45.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
44.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
44.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
44.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
44.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
43.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
43.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
43.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
43.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
43.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
42.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
42.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
42.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
42.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
42.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
42.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
42.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
42.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
41.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
41.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
40.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
40.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
40.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
40.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
40.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
40.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
40.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
40.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
40.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
40.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
40.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
39.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
39.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
39.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
39.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
39.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
39.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
38.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
38.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
38.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
38.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
38.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
38.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
38.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
38.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
38.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
38.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
38.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
38.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
38.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
37.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
37.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
37.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
36.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
36.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
36.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
36.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
36.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
36.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
36.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
36.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
36.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
35.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
35.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
35.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
35.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
35.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
35.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
35.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
35.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
34.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
34.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
34.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
34.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
34.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
34.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
34.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
33.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
33.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
33.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
33.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
33.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
33.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
33.5
DO50793
0 years, male, NA, stage:4, alive, 540 days
32.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
32.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
32.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
32.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
32.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
32.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
32.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
32.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
32.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
32.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
32.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
31.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
31.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
31.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
31.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
30.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
30.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
30.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
30.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
29.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
29.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
29.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
29.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
29.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
29.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
28.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
28.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
28.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
28.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
28.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
28.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
28.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
28.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
28.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
27.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
27.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
27.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
27.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
27.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
27.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
27.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
27.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
26.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
26.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
26.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
26.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
26.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
26.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
26.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
26.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
25.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
25.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
25.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
24.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
24.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
24.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
24.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
24.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
23.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
23.2
DO45111
0 years, male, NA, stage:2, alive, 1590 days
22.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
22.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
22.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
22.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
22.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
22.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
21.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
20.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
20.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
19.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
19.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
18.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
17.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
15.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
11.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
983
Tumor
1.0
661
Tumor
0.9
965
Tumor
0.8
161
Tumor
0.7
695
Tumor
0.7
391
Tumor
0.6
815
Tumor
0.6
351
Tumor
0.6
367
Tumor
0.5
425
Tumor
0.5
727
Tumor
0.5
341
Tumor
0.5
517
Tumor
0.5
427
Tumor
0.5
131
Tumor
0.5
743
Tumor
0.5
285
Tumor
0.5
227
Tumor
0.5
497
Tumor
0.5
943
Tumor
0.4
487
Tumor
0.4
951
Tumor
0.4
877
Tumor
0.4
413
Tumor
0.4
385
Tumor
0.4
967
Tumor
0.4
431
Tumor
0.4
473
Tumor
0.4
123
Tumor
0.4
813
Tumor
0.4
331
Tumor
0.3
185
Tumor
0.3
535
Tumor
0.3
447
Tumor
0.3
135
Tumor
0.3
523
Tumor
0.3
814
Normal
0.3
537
Tumor
0.3
355
Tumor
0.3
277
Tumor
0.3
635
Tumor
0.3
617
Tumor
0.3
817
Tumor
0.2
923
Tumor
0.2
493
Tumor
0.2
977
Tumor
0.2
271
Tumor
0.2
567
Tumor
0.2
737
Tumor
0.2
641
Tumor
0.2
571
Tumor
0.2
343
Tumor
0.2
525
Tumor
0.2
671
Tumor
0.2
478
Normal
0.2
715
Tumor
0.2
721
Tumor
0.2
112
Tumor
0.2
467
Tumor
0.2
937
Tumor
0.2
921
Tumor
0.2
455
Tumor
0.2
387
Tumor
0.2
861
Tumor
0.2
741
Tumor
0.2
744
Normal
0.2
141
Tumor
0.2
491
Tumor
0.2
435
Tumor
0.2
536
Normal
0.2
1025
Tumor
0.2
311
Tumor
0.2
221
Tumor
0.2
851
Tumor
0.2
573
Tumor
0.2
433
Tumor
0.1
1041
Tumor
0.1
524
Normal
0.1
865
Tumor
0.1
213
Tumor
0.1
881
Tumor
0.1
724
Normal
0.1
867
Tumor
0.1
1021
Tumor
0.1
1015
Tumor
0.1
498
Normal
0.1
647
Tumor
0.1
383
Tumor
0.1
553
Tumor
0.1
1031
Tumor
0.1
423
Tumor
0.1
297
Tumor
0.1
663
Tumor
0.1
477
Tumor
0.1
192
Normal
0.1
823
Tumor
0.1
917
Tumor
0.1
785
Tumor
0.1
984
Normal
0.1
538
Normal
0.1
533
Tumor
0.1
685
Tumor
0.1
415
Tumor
0.1
421
Tumor
0.1
615
Tumor
0.1
411
Tumor
0.1
283
Tumor
0.1
963
Tumor
0.1
516
Normal
0.1
857
Tumor
0.0
218
Normal
0.0
686
Normal
0.0
357
Tumor
0.0
863
Tumor
0.0
1014
Normal
0.0
445
Tumor
0.0
395
Tumor
0.0
444
Normal
0.0
384
Normal
0.0
443
Tumor
0.0
171
Tumor
0.0
187
Tumor
0.0
563
Tumor
0.0
363
Tumor
0.0
955
Tumor
0.0
975
Tumor
0.0
352
Normal
0.0
873
Tumor
0.0
883
Tumor
0.0
818
Normal
0.0
852
Normal
0.0
313
Tumor
0.0
716
Normal
0.0
268
Normal
0.0
713
Tumor
0.0
954
Normal
0.0
755
Tumor
0.0
386
Normal
0.0
211
Tumor
0.0
344
Normal
0.0
1042
Normal
0.0
261
Tumor
0.0
1026
Normal
0.0
924
Normal
0.0
217
Tumor
0.0
957
Tumor
0.0
434
Normal
0.0
257
Tumor
0.0
471
Tumor
0.0
224
Normal
0.0
463
Tumor
0.0
824
Normal
0.0
113
Tumor
0.0
492
Normal
0.0
332
Normal
0.0
554
Normal
0.0
472
Normal
0.0
1032
Normal
0.0
966
Normal
0.0
1044
Normal
0.0
513
Tumor
0.0
953
Tumor
0.0
746
Normal
-0.1
328
Normal
-0.1
456
Normal
-0.1
127
Tumor
-0.1
878
Normal
-0.1
978
Normal
-0.1
728
Normal
-0.1
882
Normal
-0.1
1022
Normal
-0.1
662
Normal
-0.1
514
Normal
-0.1
911
Tumor
-0.1
742
Normal
-0.1
353
Tumor
-0.1
981
Tumor
-0.1
142
Normal
-0.1
364
Normal
-0.1
448
Normal
-0.1
884
Normal
-0.1
223
Tumor
-0.1
866
Normal
-0.1
212
Normal
-0.1
393
Tumor
-0.1
874
Normal
-0.1
816
Normal
-0.1
515
Tumor
-0.1
396
Normal
-0.1
696
Normal
-0.1
786
Normal
-0.1
1027
Tumor
-0.1
366
Normal
-0.1
146
Normal
-0.1
534
Normal
-0.1
723
Tumor
-0.1
483
Tumor
-0.1
267
Tumor
-0.1
916
Normal
-0.1
1028
Normal
-0.1
714
Normal
-0.1
327
Tumor
-0.1
464
Normal
-0.1
968
Normal
-0.1
868
Normal
-0.1
488
Normal
-0.1
858
Normal
-0.1
416
Normal
-0.1
125
Tumor
-0.1
375
Tumor
-0.1
558
Normal
-0.1
461
Tumor
-0.1
636
Normal
-0.1
1043
Tumor
-0.1
284
Normal
-0.1
738
Normal
-0.1
862
Normal
-0.1
912
Normal
-0.1
342
Normal
-0.1
777
Tumor
-0.1
915
Tumor
-0.1
778
Normal
-0.1
1013
Tumor
-0.1
526
Normal
-0.1
482
Normal
-0.1
922
Normal
-0.1
231
Tumor
-0.1
147
Tumor
-0.1
666
Normal
-0.1
557
Tumor
-0.1
528
Normal
-0.1
1016
Normal
-0.1
298
Normal
-0.1
628
Normal
-0.1
918
Normal
-0.1
1046
Normal
-0.2
958
Normal
-0.2
474
Normal
-0.2
976
Normal
-0.2
964
Normal
-0.2
356
Normal
-0.2
938
Normal
-0.2
361
Tumor
-0.2
354
Normal
-0.2
1045
Tumor
-0.2
388
Normal
-0.2
214
Normal
-0.2
484
Normal
-0.2
278
Normal
-0.2
925
Tumor
-0.2
465
Tumor
-0.2
365
Tumor
-0.2
362
Normal
-0.2
546
Normal
-0.2
451
Tumor
-0.2
574
Normal
-0.2
468
Normal
-0.2
494
Normal
-0.2
664
Normal
-0.2
944
Normal
-0.2
412
Normal
-0.2
272
Normal
-0.2
314
Normal
-0.2
952
Normal
-0.2
262
Normal
-0.2
648
Normal
-0.2
145
Tumor
-0.2
392
Normal
-0.2
222
Normal
-0.2
462
Normal
-0.2
466
Normal
-0.2
672
Normal
-0.2
196
Normal
-0.2
572
Normal
-0.2
756
Normal
-0.2
191
Tumor
-0.2
616
Normal
-0.2
481
Tumor
-0.2
228
Normal
-0.2
358
Normal
-0.2
956
Normal
-0.2
745
Tumor
-0.2
394
Normal
-0.2
982
Normal
-0.2
518
Normal
-0.2
864
Normal
-0.2
426
Normal
-0.2
188
Normal
-0.2
722
Normal
-0.2
428
Normal
-0.2
138
Normal
-0.2
642
Normal
-0.2
312
Normal
-0.2
258
Normal
-0.2
148
Normal
-0.2
436
Normal
-0.2
376
Normal
-0.2
422
Normal
-0.3
926
Normal
-0.3
545
Tumor
-0.3
286
Normal
-0.3
527
Tumor
-0.3
124
Normal
-0.3
136
Normal
-0.3
698
Normal
-0.3
368
Normal
-0.3
914
Normal
-0.3
913
Tumor
-0.3
232
Normal
-0.3
414
Normal
-0.3
618
Normal
-0.3
186
Normal
-0.3
697
Tumor
-0.3
446
Normal
-0.3
424
Normal
-0.3
137
Tumor
-0.3
452
Normal
-0.3
432
Normal
-0.3
126
Normal
-0.3
195
Tumor
-0.3
111
Normal
-0.3
162
Normal
-0.3
132
Normal
-0.3
172
Normal
-0.4
564
Normal
-0.4
627
Tumor
-0.4
114
Normal
-0.4
665
Tumor
-0.4
568
Normal
-0.4
128
Normal
-0.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.