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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH2D3C is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
32.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
28.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
27.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
20.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
18.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
16.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
15.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
14.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
12.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
12.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
12.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
10.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
10.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
10.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
10.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
7.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
7.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
6.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
6.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
6.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
6.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
6.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
5.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
5.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
5.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
5.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
5.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
5.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
5.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
5.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
5.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
4.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
4.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
4.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
4.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
4.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
4.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
3.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
3.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
3.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
3.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
3.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
3.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
2.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
1.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
1.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH2D3C is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
105.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
78.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
78.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
70.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
70.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
69.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
69.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
66.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
63.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
61.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
60.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
59.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
59.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
57.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
57.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
55.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
54.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
54.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
52.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
51.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
51.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
51.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
50.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
49.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
48.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
47.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
46.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
46.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
46.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
46.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
45.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
45.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
45.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
44.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
44.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
43.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
43.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
42.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
42.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
42.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
41.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
41.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
41.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
41.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
40.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
40.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
40.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
40.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
39.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
39.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
39.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
39.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
39.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
38.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
38.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
38.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
38.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
37.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
37.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
37.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
37.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
37.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
37.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
37.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
36.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
36.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
36.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
35.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
35.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
35.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
34.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
34.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
34.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
34.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
34.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
34.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
34.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
34.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
34.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
34.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
33.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
33.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
33.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
33.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
33.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
33.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
33.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
33.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
33.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
32.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
32.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
32.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
32.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
32.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
32.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
32.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
31.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
31.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
31.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
31.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
31.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
31.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
31.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
31.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
31.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
30.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
30.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
30.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
30.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
30.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
30.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
30.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
30.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
29.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
29.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
29.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
29.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
29.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
29.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
29.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
29.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
29.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
29.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
28.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
28.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
28.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
28.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
28.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
28.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
28.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
28.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
28.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
28.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
28.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
28.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
28.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
28.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
28.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
28.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
28.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
28.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
28.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
27.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
27.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
27.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
27.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
27.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
27.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
27.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
27.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
26.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
26.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
26.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
26.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
26.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
26.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
26.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
26.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
26.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
26.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
26.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
25.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
25.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
25.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
25.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
25.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
25.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
25.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
25.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
25.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
25.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
25.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
25.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
25.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
25.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
25.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
24.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
24.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
24.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
24.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
24.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
24.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
24.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
24.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
24.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
24.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
24.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
24.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
24.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
24.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
23.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
23.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
23.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
23.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
23.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
23.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
23.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
23.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
23.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
23.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
23.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
23.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
23.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
22.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
22.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
22.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
22.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
22.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
22.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
22.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
22.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
22.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
22.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
22.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
22.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
22.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
22.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
22.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
22.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
22.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
22.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
22.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
22.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
22.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
22.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
22.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
22.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
22.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
21.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
21.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
21.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
21.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
21.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
21.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
21.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
21.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
21.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
21.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
21.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
20.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
20.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
20.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
20.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
20.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
20.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
20.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
20.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
20.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
20.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
20.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
20.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
20.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
20.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
20.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
20.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
20.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
20.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
19.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
19.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
19.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
19.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
19.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
19.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
19.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
19.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
19.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
19.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
19.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
19.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
19.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
18.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
18.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
18.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
18.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
18.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
18.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
18.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
18.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
18.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
18.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
18.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
18.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
18.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
17.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
17.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
17.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
17.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
17.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
17.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
17.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
17.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
17.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
17.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
16.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
16.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
16.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
16.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
16.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
16.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
16.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
16.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
16.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
16.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
16.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
16.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
16.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
16.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
15.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
15.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
15.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
15.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
15.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
15.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
15.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
15.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
15.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
15.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
15.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
15.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
15.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
14.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
14.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
14.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
14.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
14.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
14.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
14.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
14.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
14.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
14.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
14.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
14.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
13.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
13.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
13.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
13.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
13.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
13.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
13.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
13.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
13.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
13.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
13.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
13.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
12.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
12.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
12.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
12.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
12.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
12.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
12.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
12.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
12.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
12.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
11.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
11.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
11.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
11.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
11.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
11.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
11.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
11.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
11.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
10.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
10.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
10.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
10.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
10.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
10.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
10.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
10.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
10.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
10.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
10.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
9.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
9.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
9.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
8.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
8.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
8.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
8.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
8.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
7.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
7.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
7.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
7.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
7.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
7.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
7.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
7.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
6.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
6.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
6.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
6.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
6.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
6.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
6.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
6.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
6.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
5.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
5.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
5.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
4.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
4.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
4.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
4.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
4.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
4.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
4.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
4.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
4.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
4.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
4.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
3.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
3.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
3.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
3.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
3.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
3.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
3.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
3.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
3.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
3.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
3.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
2.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
2.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
2.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
2.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
2.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
2.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
2.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
2.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
2.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH2D3C is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
65.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
48.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
44.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
43.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
38.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
38.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
38.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
37.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
35.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
34.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
33.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
31.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
31.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
30.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
29.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
28.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
28.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
28.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
27.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
27.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
27.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
27.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
25.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
25.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
24.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
24.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
24.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
24.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
23.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
23.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
23.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
22.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
22.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
22.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
22.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
22.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
21.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
21.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
21.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
21.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
20.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
20.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
20.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
20.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
19.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
19.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
19.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
19.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
18.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
18.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
17.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
17.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
16.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
16.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
15.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
14.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
14.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
14.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
14.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
13.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
13.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
12.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
12.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
11.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
11.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
11.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
11.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
9.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
8.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
8.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
8.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
8.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
6.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
6.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
6.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
5.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
5.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
5.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
5.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
5.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
4.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
3.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
2.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
2.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
2.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
1.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
1.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH2D3C is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
3.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
28.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
26.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
26.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
25.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
17.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
15.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
15.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
13.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
13.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
13.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
13.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
13.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
13.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
10.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
10.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
10.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
9.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
9.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
8.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
8.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
8.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
7.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
7.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
7.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
7.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
7.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
7.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
7.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
7.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
7.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
6.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
6.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
6.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
6.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
6.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
5.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
5.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
5.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
5.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
5.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
5.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
5.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
5.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
5.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
5.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
5.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
5.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
5.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
5.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
5.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
4.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
4.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
4.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
4.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
4.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
4.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
4.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
4.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
4.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
4.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
4.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
4.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
4.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
4.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
4.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
4.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
4.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
4.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
4.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
4.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
4.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
4.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
3.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
3.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
3.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
3.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
3.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
3.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
3.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
3.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
3.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
3.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
3.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
3.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
3.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
3.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
3.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
3.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
3.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
3.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
3.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
3.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
3.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
3.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
3.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
3.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
3.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
3.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
3.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
3.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
3.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
3.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
3.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
3.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
3.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
3.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
3.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
3.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
3.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
3.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
2.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
2.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
2.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
2.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
2.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
2.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
2.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
2.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
2.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
2.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
2.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
2.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
2.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
2.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
2.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
2.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
2.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
2.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
2.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
2.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
2.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
2.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
2.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
2.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
2.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
2.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
2.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
2.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
2.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
2.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
2.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
2.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
2.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
2.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
2.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
2.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
2.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
2.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
2.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
2.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
2.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
2.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
2.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
2.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
2.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
2.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
2.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
2.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
2.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
2.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
2.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
2.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
1.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
1.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
1.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
1.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
1.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
1.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
1.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
1.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
1.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
1.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
1.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
1.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
1.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
1.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
1.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
1.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
1.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
1.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
1.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
1.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
1.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
1.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
1.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
1.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
1.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
1.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
1.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
1.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
1.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
1.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
1.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
1.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
1.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
1.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
1.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
1.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
1.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
1.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
1.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
1.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
1.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
1.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
1.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
1.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
1.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
1.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
1.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
1.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
1.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
1.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
0.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
0.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
0.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
0.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
0.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0066470004
Tumor
1.1
CPT0088760003
Tumor
1.1
CPT0006630003
Tumor
1.1
CPT0077490003
Tumor
1.1
CPT0010160003
Tumor
1.0
CPT0007860003
Tumor
0.9
CPT0078510003
Tumor
0.9
CPT0066480003
Tumor
0.9
CPT0092730003
Tumor
0.9
CPT0021240003
Tumor
0.8
CPT0012900004
Tumor
0.8
CPT0087040003
Tumor
0.8
CPT0000780007
Tumor
0.8
CPT0023690003
Tumor
0.8
CPT0089020003
Tumor
0.8
CPT0019990003
Tumor
0.8
CPT0069160003
Tumor
0.7
CPT0079480003
Tumor
0.6
CPT0075560003
Tumor
0.6
CPT0015910003
Tumor
0.6
CPT0001340003
Tumor
0.6
CPT0078990003
Tumor
0.6
CPT0086870003
Tumor
0.5
CPT0085670003
Tumor
0.5
CPT0006440003
Tumor
0.5
CPT0009000003
Tumor
0.5
CPT0088900003
Tumor
0.5
CPT0079270003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0092790003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0088690003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0081990003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0009060003
Tumor
0.3
CPT0066520001
Normal
0.3
CPT0063320003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0001540009
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0092160003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0079410003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0065750003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0076330003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0026410003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0000890001
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0002370001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0001180009
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0077110003
Tumor
-0.2
CPT0019160001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0088550004
Tumor
-0.3
CPT0020120003
Tumor
-0.3
CPT0078530001
Normal
-0.3
CPT0079300001
Normal
-0.3
CPT0012920003
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0017450001
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0000790001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0063640001
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0009080003
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0077310003
Tumor
-0.3
CPT0089040001
Normal
-0.4
CPT0086970003
Normal
-0.4
CPT0001260009
Tumor
-0.4
CPT0065820001
Normal
-0.4
CPT0020130001
Normal
-0.4
CPT0001190001
Normal
-0.4
CPT0082010001
Normal
-0.4
CPT0077500001
Normal
-0.4
CPT0075570001
Normal
-0.5
CPT0078840001
Normal
-0.5
CPT0023350003
Tumor
-0.5
CPT0023710001
Normal
-0.5
CPT0011410003
Tumor
-0.5
CPT0088500001
Normal
-0.5
CPT0076350001
Normal
-0.5
CPT0092800003
Normal
-0.6
CPT0006730001
Normal
-0.6
CPT0086370003
Normal
-0.6
CPT0078660003
Tumor
-0.6
CPT0088780001
Normal
-0.6
CPT0001350001
Normal
-0.6
CPT0001270001
Normal
-0.6
CPT0086890003
Normal
-0.7
CPT0078800003
Tumor
-0.7
CPT0002270011
Tumor
-0.7
CPT0088970003
Tumor
-0.8
CPT0077140001
Normal
-1.0
CPT0007870001
Normal
-1.1
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0071150004
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0025050003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0010110003
Tumor
N/A
CPT0092290003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006950001
Normal
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0014160003
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0014130001
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0081620001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0010120001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0001220008
Tumor
N/A
CPT0025580004
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
